RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 NHSL1Q5SYE7 1610 aa2.69□□□□□ -1.98
RNU6-42P-201ENST00000384165 PKD2Q13563 968 aa2.69□□□□□ -1.98
RNU6-42P-201ENST00000384165 MLECQ14165 292 aa2.69□□□□□ -1.98
RNU6-42P-201ENST00000384165 GPR162Q16538 588 aa2.69□□□□□ -1.98
RNU6-42P-201ENST00000384165 PRDM10Q9NQV6 1147 aa2.69□□□□□ -1.98
RNU6-42P-201ENST00000384165 PDE4DIPQ5VU43 2346 aa2.69□□□□□ -1.98
RNU6-42P-201ENST00000384165 KIF21BO75037 1637 aa2.68□□□□□ -1.98
RNU6-42P-201ENST00000384165 GRWD1Q9BQ67 446 aaKnown RBP eCLIP2.68□□□□□ -1.98
RNU6-42P-201ENST00000384165 PLB1Q6P1J6 1458 aa2.68□□□□□ -1.98
RNU6-42P-201ENST00000384165 LRRC7Q96NW7 1537 aa2.68□□□□□ -1.98
RNU6-42P-201ENST00000384165 BAG6P46379 1132 aa2.67□□□□□ -1.98
RNU6-42P-201ENST00000384165 MADDQ8WXG6 1647 aa2.67□□□□□ -1.98
RNU6-42P-201ENST00000384165 POGZQ7Z3K3 1410 aa2.67□□□□□ -1.98
RNU6-42P-201ENST00000384165 FANCD2Q9BXW9 1451 aa2.66□□□□□ -1.98
RNU6-42P-201ENST00000384165 ATAD2BQ9ULI0 1458 aa2.66□□□□□ -1.98
RNU6-42P-201ENST00000384165 UTRNP46939 3433 aa2.66□□□□□ -1.98
RNU6-42P-201ENST00000384165 KCNQ2O43526 872 aa2.66□□□□□ -1.98
RNU6-42P-201ENST00000384165 KCTD2Q14681 263 aa2.66□□□□□ -1.98
RNU6-42P-201ENST00000384165 ZNF526Q8TF50 670 aaPredicted RBP2.66□□□□□ -1.98
RNU6-42P-201ENST00000384165 PCNTO95613 3336 aa2.66□□□□□ -1.98
RNU6-42P-201ENST00000384165 BLMP54132 1417 aaPredicted RBP2.66□□□□□ -1.98
RNU6-42P-201ENST00000384165 FHOD3Q2V2M9 1422 aa2.66□□□□□ -1.98
RNU6-42P-201ENST00000384165 AFF2P51816 1311 aa2.66□□□□□ -1.98
RNU6-42P-201ENST00000384165 SPATA31A6Q5VVP1 1343 aa2.66□□□□□ -1.98
RNU6-42P-201ENST00000384165 JCADQ9P266 1359 aa2.65□□□□□ -1.98
RNU6-42P-201ENST00000384165 HTRA3P83110 453 aa2.65□□□□□ -1.99
RNU6-42P-201ENST00000384165 SLC51AQ86UW1 340 aa2.65□□□□□ -1.99
RNU6-42P-201ENST00000384165 CHD8Q9HCK8 2581 aa2.65□□□□□ -1.99
RNU6-42P-201ENST00000384165 TRANK1O15050 2925 aa2.65□□□□□ -1.99
RNU6-42P-201ENST00000384165 RIMS1Q86UR5 1692 aaKnown RBP2.64□□□□□ -1.99
RNU6-42P-201ENST00000384165 AIDAQ96BJ3 306 aa2.64□□□□□ -1.99
RNU6-42P-201ENST00000384165 COL25A1Q9BXS0 654 aaPredicted RBP2.64□□□□□ -1.99
RNU6-42P-201ENST00000384165 ATF5Q9Y2D1 282 aaPredicted RBP2.64□□□□□ -1.99
RNU6-42P-201ENST00000384165 KIAA0556O60303 1618 aa2.64□□□□□ -1.99
RNU6-42P-201ENST00000384165 URB2Q14146 1524 aaKnown RBP2.63□□□□□ -1.99
RNU6-42P-201ENST00000384165 BAHCC1Q9P281 2608 aa2.63□□□□□ -1.99
RNU6-42P-201ENST00000384165 KIAA1210Q9ULL0 1709 aa2.63□□□□□ -1.99
RNU6-42P-201ENST00000384165 RTEL1-TNFRSF6BF6WH68 1400 aa2.63□□□□□ -1.99
RNU6-42P-201ENST00000384165 NCOA1Q15788 1441 aa2.63□□□□□ -1.99
RNU6-42P-201ENST00000384165 TOMM70O94826 608 aa2.63□□□□□ -1.99
RNU6-42P-201ENST00000384165 CTCFP49711 727 aaPredicted RBP2.63□□□□□ -1.99
RNU6-42P-201ENST00000384165 FXR1P51114 621 aaKnown RBP eCLIP2.63□□□□□ -1.99
RNU6-42P-201ENST00000384165 KDM5CP41229 1560 aa2.62□□□□□ -1.99
RNU6-42P-201ENST00000384165 CHD4Q14839 1912 aa2.62□□□□□ -1.99
RNU6-42P-201ENST00000384165 NBPF8Q3BBV2 869 aa2.62□□□□□ -1.99
RNU6-42P-201ENST00000384165 NBPF14Q5TI25 921 aa2.62□□□□□ -1.99
RNU6-42P-201ENST00000384165 PELP1Q8IZL8 1130 aaKnown RBP2.62□□□□□ -1.99
RNU6-42P-201ENST00000384165 NBPF15Q8N660 670 aa2.62□□□□□ -1.99
RNU6-42P-201ENST00000384165 P2RX7Q99572 595 aaKnown RBP2.62□□□□□ -1.99
RNU6-42P-201ENST00000384165 SYT17Q9BSW7 474 aa2.62□□□□□ -1.99
RNU6-42P-201ENST00000384165 RAPGEFL1Q9UHV5 662 aa2.62□□□□□ -1.99
RNU6-42P-201ENST00000384165 BCL9LQ86UU0 1499 aa2.62□□□□□ -1.99
RNU6-42P-201ENST00000384165 CPS1P31327 1500 aa2.62□□□□□ -1.99
RNU6-42P-201ENST00000384165 BCORL1Q5H9F3 1711 aa2.62□□□□□ -1.99
RNU6-42P-201ENST00000384165 EIF4G3O43432 1585 aaKnown RBP2.61□□□□□ -1.99
RNU6-42P-201ENST00000384165 FAM135BQ49AJ0 1406 aa2.61□□□□□ -1.99
RNU6-42P-201ENST00000384165 ADRA2BP18089 450 aa2.61□□□□□ -1.99
RNU6-42P-201ENST00000384165 FOXK2Q01167 660 aa2.61□□□□□ -1.99
RNU6-42P-201ENST00000384165 JPH4Q96JJ6 628 aa2.61□□□□□ -1.99
RNU6-42P-201ENST00000384165 C8orf37Q96NL8 207 aa2.61□□□□□ -1.99
RNU6-42P-201ENST00000384165 ESF1Q9H501 851 aaKnown RBP2.61□□□□□ -1.99
RNU6-42P-201ENST00000384165 SETD1BQ9UPS6 1966 aaKnown RBP2.61□□□□□ -1.99
RNU6-42P-201ENST00000384165 FER1L4A9Z1Z3 1794 aa2.61□□□□□ -1.99
RNU6-42P-201ENST00000384165 CARMIL2Q6F5E8 1435 aa2.6□□□□□ -1.99
RNU6-42P-201ENST00000384165 PREX1Q8TCU6 1659 aa2.6□□□□□ -1.99
RNU6-42P-201ENST00000384165 SHANK2Q9UPX8 1470 aa2.6□□□□□ -1.99
RNU6-42P-201ENST00000384165 TNRC18O15417 2968 aaPredicted RBP2.6□□□□□ -1.99
RNU6-42P-201ENST00000384165 CUX1P39880 1505 aa2.6□□□□□ -1.99
RNU6-42P-201ENST00000384165 TOPBP1Q92547 1522 aa2.6□□□□□ -1.99
RNU6-42P-201ENST00000384165 MYO15BQ96JP2 1530 aa2.6□□□□□ -1.99
RNU6-42P-201ENST00000384165 FOXN1O15353 648 aa2.6□□□□□ -1.99
RNU6-42P-201ENST00000384165 EN1Q05925 392 aaPredicted RBP2.6□□□□□ -1.99
RNU6-42P-201ENST00000384165 MAP3K11Q16584 847 aa2.6□□□□□ -1.99
RNU6-42P-201ENST00000384165 TRPC5Q9UL62 973 aaPredicted RBP2.6□□□□□ -1.99
RNU6-42P-201ENST00000384165 GLI2P10070 1586 aa2.6□□□□□ -1.99
RNU6-42P-201ENST00000384165 TDRD9Q8NDG6 1382 aaKnown RBP2.6□□□□□ -1.99
RNU6-42P-201ENST00000384165 HMGXB3Q12766 1538 aa2.59□□□□□ -1.99
RNU6-42P-201ENST00000384165 KIAA0586Q9BVV6 1533 aa2.59□□□□□ -1.99
RNU6-42P-201ENST00000384165 GRIN3BO60391 1043 aa2.59□□□□□ -1.99
RNU6-42P-201ENST00000384165 LBX1P52954 281 aa2.59□□□□□ -1.99
RNU6-42P-201ENST00000384165 COL9A2Q14055 689 aaPredicted RBP2.59□□□□□ -1.99
RNU6-42P-201ENST00000384165 C16orf71Q8IYS4 520 aaPredicted RBP2.59□□□□□ -1.99
RNU6-42P-201ENST00000384165 PPRC1Q5VV67 1664 aaKnown RBP2.59□□□□□ -2
RNU6-42P-201ENST00000384165 PRG4Q92954 1404 aaPredicted RBP2.59□□□□□ -2
RNU6-42P-201ENST00000384165 ATP10DQ9P241 1426 aa2.59□□□□□ -2
RNU6-42P-201ENST00000384165 KIF3CO14782 793 aa2.58□□□□□ -2
RNU6-42P-201ENST00000384165 ALYREFQ86V81 257 aaKnown RBP2.58□□□□□ -2
RNU6-42P-201ENST00000384165 FHDC1Q9C0D6 1143 aaPredicted RBP2.58□□□□□ -2
RNU6-42P-201ENST00000384165 TTBK1Q5TCY1 1321 aaPredicted RBP2.58□□□□□ -2
RNU6-42P-201ENST00000384165 EP400Q96L91 3159 aa2.57□□□□□ -2
RNU6-42P-201ENST00000384165 CAMTA1Q9Y6Y1 1673 aa2.57□□□□□ -2
RNU6-42P-201ENST00000384165 KCNH8Q96L42 1107 aa2.57□□□□□ -2
RNU6-42P-201ENST00000384165 USP21Q9UK80 565 aa2.57□□□□□ -2
RNU6-42P-201ENST00000384165 MED14O60244 1454 aa2.57□□□□□ -2
RNU6-42P-201ENST00000384165 EPRSP07814 1512 aaKnown RBP2.57□□□□□ -2
RNU6-42P-201ENST00000384165 NWD1Q149M9 1564 aa2.57□□□□□ -2
RNU6-42P-201ENST00000384165 CEP170Q5SW79 1584 aa2.57□□□□□ -2
RNU6-42P-201ENST00000384165 RBAK-RBAKDNI3L0D1 243 aa2.56□□□□□ -2
RNU6-42P-201ENST00000384165 RGS20O76081 388 aa2.56□□□□□ -2
RNU6-42P-201ENST00000384165 FSTL1Q12841 308 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms