RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 FANCIQ9NVI1 1328 aa15.62■□□□□ 0.09
SRGAP3-202ENST00000383836 CSPP1Q1MSJ5 1256 aa15.6■□□□□ 0.09
SRGAP3-202ENST00000383836 NPM1P06748 294 aaKnown RBP eCLIP15.6■□□□□ 0.09
SRGAP3-202ENST00000383836 SIN3AQ96ST3 1273 aa15.59■□□□□ 0.09
SRGAP3-202ENST00000383836 PKNOX2Q96KN3 472 aa15.59■□□□□ 0.09
SRGAP3-202ENST00000383836 CALRP27797 417 aaKnown RBP15.59■□□□□ 0.09
SRGAP3-202ENST00000383836 GNL2Q13823 731 aaKnown RBP15.58■□□□□ 0.08
SRGAP3-202ENST00000383836 RWDD1Q9H446 243 aaPredicted RBP15.58■□□□□ 0.08
SRGAP3-202ENST00000383836 RGL3Q3MIN7 710 aa15.58■□□□□ 0.08
SRGAP3-202ENST00000383836 KIAA1211Q6ZU35 1233 aa15.57■□□□□ 0.08
SRGAP3-202ENST00000383836 KAT6BQ8WYB5 2073 aa15.57■□□□□ 0.08
SRGAP3-202ENST00000383836 PMFBP1Q8TBY8 1022 aa15.56■□□□□ 0.08
SRGAP3-202ENST00000383836 TNIKQ9UKE5 1360 aa15.56■□□□□ 0.08
SRGAP3-202ENST00000383836 HAP1P54257 671 aaPredicted RBP15.55■□□□□ 0.08
SRGAP3-202ENST00000383836 SKOR2Q2VWA4 1001 aaPredicted RBP15.55■□□□□ 0.08
SRGAP3-202ENST00000383836 A0A0U1RQG5 324 aaPredicted RBP15.55■□□□□ 0.08
SRGAP3-202ENST00000383836 NPHP1O15259 732 aa15.54■□□□□ 0.08
SRGAP3-202ENST00000383836 CEP164Q9UPV0 1460 aa15.54■□□□□ 0.08
SRGAP3-202ENST00000383836 MFAP1P55081 439 aaKnown RBP15.54■□□□□ 0.08
SRGAP3-202ENST00000383836 KTN1Q86UP2 1357 aaKnown RBP15.53■□□□□ 0.08
SRGAP3-202ENST00000383836 IPO8O15397 1037 aaKnown RBP15.53■□□□□ 0.08
SRGAP3-202ENST00000383836 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.53■□□□□ 0.08
SRGAP3-202ENST00000383836 GPS2Q13227 327 aa15.52■□□□□ 0.08
SRGAP3-202ENST00000383836 FAM13BQ9NYF5 915 aa15.52■□□□□ 0.08
SRGAP3-202ENST00000383836 TEX35Q5T0J7 233 aa15.51■□□□□ 0.07
SRGAP3-202ENST00000383836 CCNB3Q8WWL7 1395 aa15.51■□□□□ 0.07
SRGAP3-202ENST00000383836 C14orf37Q86TY3 774 aa15.5■□□□□ 0.07
SRGAP3-202ENST00000383836 U2SURPO15042 1029 aaKnown RBP15.5■□□□□ 0.07
SRGAP3-202ENST00000383836 TMF1P82094 1093 aa15.5■□□□□ 0.07
SRGAP3-202ENST00000383836 BAZ1AQ9NRL2 1556 aaPredicted RBP15.5■□□□□ 0.07
SRGAP3-202ENST00000383836 MTERF4Q7Z6M4 381 aaKnown RBP15.49■□□□□ 0.07
SRGAP3-202ENST00000383836 NCBP3Q53F19 620 aaKnown RBP15.49■□□□□ 0.07
SRGAP3-202ENST00000383836 MAP7D2Q96T17 732 aa15.47■□□□□ 0.07
SRGAP3-202ENST00000383836 NOM1Q5C9Z4 860 aaKnown RBP15.47■□□□□ 0.07
SRGAP3-202ENST00000383836 FAM43AQ8N2R8 423 aa15.47■□□□□ 0.07
SRGAP3-202ENST00000383836 CCDC34Q96HJ3 373 aa15.47■□□□□ 0.07
SRGAP3-202ENST00000383836 ST18O60284 1047 aa15.46■□□□□ 0.07
SRGAP3-202ENST00000383836 ITPRIPQ8IWB1 547 aa15.46■□□□□ 0.07
SRGAP3-202ENST00000383836 KIF16BQ96L93 1317 aa15.45■□□□□ 0.06
SRGAP3-202ENST00000383836 RALBP1Q15311 655 aa15.45■□□□□ 0.06
SRGAP3-202ENST00000383836 FAM161AQ3B820 660 aa15.45■□□□□ 0.06
SRGAP3-202ENST00000383836 PDE4AP27815 886 aa15.44■□□□□ 0.06
SRGAP3-202ENST00000383836 TPM3P06753 285 aa15.44■□□□□ 0.06
SRGAP3-202ENST00000383836 DDX49Q9Y6V7 483 aaKnown RBP15.44■□□□□ 0.06
SRGAP3-202ENST00000383836 SETD5Q9C0A6 1442 aa15.44■□□□□ 0.06
SRGAP3-202ENST00000383836 PPP1R15AO75807 674 aaPredicted RBP15.44■□□□□ 0.06
SRGAP3-202ENST00000383836 PODXL2Q9NZ53 605 aa15.44■□□□□ 0.06
SRGAP3-202ENST00000383836 GOLGA2Q08379 1002 aa15.43■□□□□ 0.06
SRGAP3-202ENST00000383836 HSPA5P11021 654 aaKnown RBP15.43■□□□□ 0.06
SRGAP3-202ENST00000383836 APPP05067 770 aa15.43■□□□□ 0.06
SRGAP3-202ENST00000383836 PRKCSHP14314 528 aaPredicted RBP15.43■□□□□ 0.06
SRGAP3-202ENST00000383836 FOXD4L1Q9NU39 408 aa15.42■□□□□ 0.06
SRGAP3-202ENST00000383836 FHAD1B1AJZ9 1412 aa15.42■□□□□ 0.06
SRGAP3-202ENST00000383836 CLSTN1O94985 981 aa15.42■□□□□ 0.06
SRGAP3-202ENST00000383836 CENPQQ7L2Z9 268 aaPredicted RBP15.41■□□□□ 0.06
SRGAP3-202ENST00000383836 APBB1O00213 710 aa15.4■□□□□ 0.06
SRGAP3-202ENST00000383836 HSP90B1P14625 803 aaKnown RBP15.4■□□□□ 0.06
SRGAP3-202ENST00000383836 GOLGA6L19H0YKK7 550 aa15.39■□□□□ 0.05
SRGAP3-202ENST00000383836 CCDC70Q6NSX1 233 aa15.39■□□□□ 0.05
SRGAP3-202ENST00000383836 PDE3BQ13370 1112 aa15.39■□□□□ 0.05
SRGAP3-202ENST00000383836 TPM2P07951 284 aa15.38■□□□□ 0.05
SRGAP3-202ENST00000383836 CCAR2Q8N163 923 aaKnown RBP15.38■□□□□ 0.05
SRGAP3-202ENST00000383836 SENP3Q9H4L4 574 aaPredicted RBP15.37■□□□□ 0.05
SRGAP3-202ENST00000383836 ANO8Q9HCE9 1232 aaPredicted RBP15.37■□□□□ 0.05
SRGAP3-202ENST00000383836 SLC4A3P48751 1232 aa15.37■□□□□ 0.05
SRGAP3-202ENST00000383836 MORC1Q86VD1 984 aa15.37■□□□□ 0.05
SRGAP3-202ENST00000383836 ZNF592Q92610 1267 aa15.37■□□□□ 0.05
SRGAP3-202ENST00000383836 ATP6V1DQ9Y5K8 247 aa15.37■□□□□ 0.05
SRGAP3-202ENST00000383836 PHLDB1Q86UU1 1377 aa15.36■□□□□ 0.05
SRGAP3-202ENST00000383836 CCDC66A2RUB6 948 aa15.36■□□□□ 0.05
SRGAP3-202ENST00000383836 CFDP1Q9UEE9 299 aaPredicted RBP15.36■□□□□ 0.05
SRGAP3-202ENST00000383836 DCAF11Q8TEB1 546 aa15.36■□□□□ 0.05
SRGAP3-202ENST00000383836 GPATCH3Q96I76 525 aa15.36■□□□□ 0.05
SRGAP3-202ENST00000383836 PLEKHG5O94827 1062 aa15.35■□□□□ 0.05
SRGAP3-202ENST00000383836 TRIM6-TRIM34B2RNG4 842 aa15.35■□□□□ 0.05
SRGAP3-202ENST00000383836 CWC15Q9P013 229 aaKnown RBP15.34■□□□□ 0.05
SRGAP3-202ENST00000383836 KRI1Q8N9T8 703 aaKnown RBP15.33■□□□□ 0.04
SRGAP3-202ENST00000383836 POGKQ9P215 609 aa15.33■□□□□ 0.04
SRGAP3-202ENST00000383836 FOXD4L5Q5VV16 416 aaPredicted RBP15.32■□□□□ 0.04
SRGAP3-202ENST00000383836 FOXD4L4Q8WXT5 416 aaPredicted RBP15.32■□□□□ 0.04
SRGAP3-202ENST00000383836 KIF3AQ9Y496 699 aa15.32■□□□□ 0.04
SRGAP3-202ENST00000383836 TSR1Q2NL82 804 aaKnown RBP15.31■□□□□ 0.04
SRGAP3-202ENST00000383836 ARHGAP35Q9NRY4 1499 aa15.31■□□□□ 0.04
SRGAP3-202ENST00000383836 ARGLU1Q9NWB6 273 aaPredicted RBP15.31■□□□□ 0.04
SRGAP3-202ENST00000383836 CENPJQ9HC77 1338 aaPredicted RBP15.31■□□□□ 0.04
SRGAP3-202ENST00000383836 BECN2A8MW95 431 aa15.31■□□□□ 0.04
SRGAP3-202ENST00000383836 SMC4Q9NTJ3 1288 aa15.31■□□□□ 0.04
SRGAP3-202ENST00000383836 NOL8Q76FK4 1167 aaKnown RBP15.31■□□□□ 0.04
SRGAP3-202ENST00000383836 ZBED9Q6R2W3 1325 aa15.31■□□□□ 0.04
SRGAP3-202ENST00000383836 HMMRO75330 724 aa15.3■□□□□ 0.04
SRGAP3-202ENST00000383836 WRNQ14191 1432 aaPredicted RBP eCLIP15.3■□□□□ 0.04
SRGAP3-202ENST00000383836 PLEKHD1A6NEE1 506 aa15.3■□□□□ 0.04
SRGAP3-202ENST00000383836 KIF27Q86VH2 1401 aa15.3■□□□□ 0.04
SRGAP3-202ENST00000383836 PATL2C9JE40 543 aaKnown RBP15.3■□□□□ 0.04
SRGAP3-202ENST00000383836 DIAPH3Q9NSV4 1193 aa15.3■□□□□ 0.04
SRGAP3-202ENST00000383836 CREBRFQ8IUR6 639 aa15.29■□□□□ 0.04
SRGAP3-202ENST00000383836 TPM1P09493 284 aa15.29■□□□□ 0.04
SRGAP3-202ENST00000383836 RTF1Q92541 710 aaKnown RBP15.29■□□□□ 0.04
SRGAP3-202ENST00000383836 ROCK2O75116 1388 aaKnown RBP15.28■□□□□ 0.04
SRGAP3-202ENST00000383836 MRE11P49959 708 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms