RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 ZBTB7CA1YPR0 619 aa25.2■■□□□ 1.62
CSPG5-202ENST00000383738 TOP2BQ02880 1626 aa25.2■■□□□ 1.62
CSPG5-202ENST00000383738 STK26Q9P289 416 aa25.2■■□□□ 1.62
CSPG5-202ENST00000383738 PPM1GO15355 546 aaPredicted RBP25.19■■□□□ 1.62
CSPG5-202ENST00000383738 C14orf37Q86TY3 774 aa25.19■■□□□ 1.62
CSPG5-202ENST00000383738 SPAG9O60271 1321 aaKnown RBP25.18■■□□□ 1.62
CSPG5-202ENST00000383738 NEFMP07197 916 aa25.18■■□□□ 1.62
CSPG5-202ENST00000383738 CC2D1BQ5T0F9 858 aaKnown RBP25.18■■□□□ 1.62
CSPG5-202ENST00000383738 NOP58Q9Y2X3 529 aaKnown RBP25.17■■□□□ 1.62
CSPG5-202ENST00000383738 GRIN2BQ13224 1484 aa25.16■■□□□ 1.62
CSPG5-202ENST00000383738 MRC2Q9UBG0 1479 aa25.15■■□□□ 1.62
CSPG5-202ENST00000383738 DHX57Q6P158 1386 aaKnown RBP25.14■■□□□ 1.62
CSPG5-202ENST00000383738 CCDC18Q5T9S5 1454 aa25.14■■□□□ 1.61
CSPG5-202ENST00000383738 ANKRD30AQ9BXX3 1397 aa25.13■■□□□ 1.61
CSPG5-202ENST00000383738 NEUROD2Q15784 382 aa25.1■■□□□ 1.61
CSPG5-202ENST00000383738 WDR43Q15061 677 aaKnown RBP eCLIP25.1■■□□□ 1.61
CSPG5-202ENST00000383738 AFAP1Q8N556 730 aa25.09■■□□□ 1.61
CSPG5-202ENST00000383738 PPP4R2Q9NY27 417 aa25.09■■□□□ 1.61
CSPG5-202ENST00000383738 POGKQ9P215 609 aa25.09■■□□□ 1.61
CSPG5-202ENST00000383738 SNAPC4Q5SXM2 1469 aa25.07■■□□□ 1.6
CSPG5-202ENST00000383738 SOX12O15370 315 aa25.07■■□□□ 1.6
CSPG5-202ENST00000383738 ZNF608Q9ULD9 1512 aaPredicted RBP25.06■■□□□ 1.6
CSPG5-202ENST00000383738 PRG4Q92954 1404 aaPredicted RBP25.05■■□□□ 1.6
CSPG5-202ENST00000383738 KNSTRNQ9Y448 316 aa25.05■■□□□ 1.6
CSPG5-202ENST00000383738 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
CSPG5-202ENST00000383738 PRDM2Q13029 1718 aa25.01■■□□□ 1.59
CSPG5-202ENST00000383738 WASHC2CQ9Y4E1 1318 aa25.01■■□□□ 1.59
CSPG5-202ENST00000383738 LMOD2Q6P5Q4 547 aa25.01■■□□□ 1.59
CSPG5-202ENST00000383738 LRRC9Q6ZRR7 1453 aa25■■□□□ 1.59
CSPG5-202ENST00000383738 KANK1Q14678 1352 aa24.99■■□□□ 1.59
CSPG5-202ENST00000383738 FAM69CQ0P6D2 419 aa24.99■■□□□ 1.59
CSPG5-202ENST00000383738 DNMBPQ6XZF7 1577 aa24.97■■□□□ 1.59
CSPG5-202ENST00000383738 FGD6Q6ZV73 1430 aa24.96■■□□□ 1.59
CSPG5-202ENST00000383738 PEG3Q9GZU2 1588 aa24.96■■□□□ 1.59
CSPG5-202ENST00000383738 IFT140Q96RY7 1462 aa24.95■■□□□ 1.58
CSPG5-202ENST00000383738 NUTM2FA1L443 756 aa24.94■■□□□ 1.58
CSPG5-202ENST00000383738 SRPK2P78362 688 aaKnown RBP24.92■■□□□ 1.58
CSPG5-202ENST00000383738 NCOA2Q15596 1464 aa24.9■■□□□ 1.58
CSPG5-202ENST00000383738 ERICH3Q5RHP9 1530 aa24.9■■□□□ 1.58
CSPG5-202ENST00000383738 CASKIN1Q8WXD9 1431 aa24.9■■□□□ 1.58
CSPG5-202ENST00000383738 A0A0G2JS52 829 aa24.9■■□□□ 1.58
CSPG5-202ENST00000383738 MYOM3Q5VTT5 1437 aa24.88■■□□□ 1.57
CSPG5-202ENST00000383738 TIMELESSQ9UNS1 1208 aa24.88■■□□□ 1.57
CSPG5-202ENST00000383738 ABCA10Q8WWZ4 1543 aa24.87■■□□□ 1.57
CSPG5-202ENST00000383738 ST20-MTHFSA0A0A6YYL1 179 aa24.87■■□□□ 1.57
CSPG5-202ENST00000383738 ANO8Q9HCE9 1232 aaPredicted RBP24.86■■□□□ 1.57
CSPG5-202ENST00000383738 ROCK2O75116 1388 aaKnown RBP24.86■■□□□ 1.57
CSPG5-202ENST00000383738 TMF1P82094 1093 aa24.86■■□□□ 1.57
CSPG5-202ENST00000383738 TRAK1Q9UPV9 953 aa24.86■■□□□ 1.57
CSPG5-202ENST00000383738 RSPH4AQ5TD94 716 aa24.84■■□□□ 1.57
CSPG5-202ENST00000383738 LAMC3Q9Y6N6 1575 aa24.84■■□□□ 1.57
CSPG5-202ENST00000383738 CCER2I3L3R5 266 aa24.82■■□□□ 1.56
CSPG5-202ENST00000383738 MSH5O43196 834 aa24.81■■□□□ 1.56
CSPG5-202ENST00000383738 CDK13Q14004 1512 aaKnown RBP24.8■■□□□ 1.56
CSPG5-202ENST00000383738 U2SURPO15042 1029 aaKnown RBP24.79■■□□□ 1.56
CSPG5-202ENST00000383738 CDCA8Q53HL2 280 aa24.79■■□□□ 1.56
CSPG5-202ENST00000383738 RAPGEF3O95398 923 aa24.79■■□□□ 1.56
CSPG5-202ENST00000383738 KIF15Q9NS87 1388 aa24.78■■□□□ 1.56
CSPG5-202ENST00000383738 PLB1Q6P1J6 1458 aa24.77■■□□□ 1.56
CSPG5-202ENST00000383738 RGS3P49796 1198 aa24.68■■□□□ 1.54
CSPG5-202ENST00000383738 CCDC144AA2RUR9 1427 aa24.68■■□□□ 1.54
CSPG5-202ENST00000383738 FYCO1Q9BQS8 1478 aa24.67■■□□□ 1.54
CSPG5-202ENST00000383738 PAK3O75914 559 aaPredicted RBP24.66■■□□□ 1.54
CSPG5-202ENST00000383738 ANKRD50Q9ULJ7 1429 aa24.66■■□□□ 1.54
CSPG5-202ENST00000383738 PRKCSHP14314 528 aaPredicted RBP24.66■■□□□ 1.54
CSPG5-202ENST00000383738 KIAA0586Q9BVV6 1533 aa24.65■■□□□ 1.54
CSPG5-202ENST00000383738 MORC1Q86VD1 984 aa24.64■■□□□ 1.54
CSPG5-202ENST00000383738 HAP1P54257 671 aaPredicted RBP24.64■■□□□ 1.53
CSPG5-202ENST00000383738 IL27Q8NEV9 243 aa24.63■■□□□ 1.53
CSPG5-202ENST00000383738 CFAP53Q96M91 514 aa24.63■■□□□ 1.53
CSPG5-202ENST00000383738 SYNJ2O15056 1496 aa24.62■■□□□ 1.53
CSPG5-202ENST00000383738 TMEM132EQ6IEE7 984 aa24.62■■□□□ 1.53
CSPG5-202ENST00000383738 FANCIQ9NVI1 1328 aa24.62■■□□□ 1.53
CSPG5-202ENST00000383738 SLC4A3P48751 1232 aa24.61■■□□□ 1.53
CSPG5-202ENST00000383738 IPO9Q96P70 1041 aaKnown RBP24.61■■□□□ 1.53
CSPG5-202ENST00000383738 RRBP1Q9P2E9 1410 aaKnown RBP24.6■■□□□ 1.53
CSPG5-202ENST00000383738 GRIN2AQ12879 1464 aa24.59■■□□□ 1.53
CSPG5-202ENST00000383738 SCAPERQ9BY12 1400 aa24.59■■□□□ 1.53
CSPG5-202ENST00000383738 ARHGAP5Q13017 1502 aa24.58■■□□□ 1.53
CSPG5-202ENST00000383738 EPRSP07814 1512 aaKnown RBP24.57■■□□□ 1.52
CSPG5-202ENST00000383738 FRAT1Q92837 279 aaPredicted RBP24.57■■□□□ 1.52
CSPG5-202ENST00000383738 TROQ12816 1431 aaPredicted RBP24.56■■□□□ 1.52
CSPG5-202ENST00000383738 TIAM1Q13009 1591 aa24.56■■□□□ 1.52
CSPG5-202ENST00000383738 NBPF1Q3BBV0 1214 aa24.56■■□□□ 1.52
CSPG5-202ENST00000383738 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.56■■□□□ 1.52
CSPG5-202ENST00000383738 PANK3Q9H999 370 aa24.55■■□□□ 1.52
CSPG5-202ENST00000383738 NBPF8Q3BBV2 869 aa24.54■■□□□ 1.52
CSPG5-202ENST00000383738 MINK1Q8N4C8 1332 aaPredicted RBP24.54■■□□□ 1.52
CSPG5-202ENST00000383738 ARHGEF11O15085 1522 aa24.53■■□□□ 1.52
CSPG5-202ENST00000383738 PCF11O94913 1555 aaKnown RBP24.53■■□□□ 1.52
CSPG5-202ENST00000383738 IQGAP2Q13576 1575 aa24.53■■□□□ 1.52
CSPG5-202ENST00000383738 UACAQ9BZF9 1416 aa24.53■■□□□ 1.52
CSPG5-202ENST00000383738 CCDC146Q8IYE0 955 aa24.52■■□□□ 1.52
CSPG5-202ENST00000383738 GLIPR1L2Q4G1C9 344 aa24.51■■□□□ 1.51
CSPG5-202ENST00000383738 EFCAB5A4FU69 1503 aa24.51■■□□□ 1.51
CSPG5-202ENST00000383738 HDGFP51858 240 aaKnown RBP24.5■■□□□ 1.51
CSPG5-202ENST00000383738 USP47Q96K76 1375 aa24.5■■□□□ 1.51
CSPG5-202ENST00000383738 MAPK8IP3Q9UPT6 1336 aa24.49■■□□□ 1.51
CSPG5-202ENST00000383738 CFAP70Q5T0N1 1121 aa24.49■■□□□ 1.51
CSPG5-202ENST00000383738 BIVM-ERCC5R4GMW8 1640 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms