RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 KIF21AQ7Z4S6 1674 aa20.08■□□□□ 0.81
CTNS-202ENST00000381870 PPM1GO15355 546 aaPredicted RBP20.08■□□□□ 0.81
CTNS-202ENST00000381870 RRP7BPQ9NSQ0 103 aa20.08■□□□□ 0.81
CTNS-202ENST00000381870 FGD5Q6ZNL6 1462 aa20.08■□□□□ 0.8
CTNS-202ENST00000381870 TCERG1O14776 1098 aaKnown RBP20.07■□□□□ 0.8
CTNS-202ENST00000381870 EIF5BO60841 1220 aaKnown RBP20.06■□□□□ 0.8
CTNS-202ENST00000381870 NBPF8Q3BBV2 869 aa20.05■□□□□ 0.8
CTNS-202ENST00000381870 BACH2Q9BYV9 841 aa20.05■□□□□ 0.8
CTNS-202ENST00000381870 MTUS2Q5JR59 1369 aa20.05■□□□□ 0.8
CTNS-202ENST00000381870 FOXD1Q16676 465 aa20.04■□□□□ 0.8
CTNS-202ENST00000381870 EXOC6Q8TAG9 804 aa20.04■□□□□ 0.8
CTNS-202ENST00000381870 GSE1Q14687 1217 aa20.03■□□□□ 0.8
CTNS-202ENST00000381870 CHIC2Q9UKJ5 165 aa20.03■□□□□ 0.8
CTNS-202ENST00000381870 PRDM2Q13029 1718 aa20.03■□□□□ 0.8
CTNS-202ENST00000381870 URB2Q14146 1524 aaKnown RBP20.02■□□□□ 0.8
CTNS-202ENST00000381870 DHX29Q7Z478 1369 aaKnown RBP20■□□□□ 0.79
CTNS-202ENST00000381870 ABCA5Q8WWZ7 1642 aa19.99■□□□□ 0.79
CTNS-202ENST00000381870 MYOM3Q5VTT5 1437 aa19.99■□□□□ 0.79
CTNS-202ENST00000381870 SPATA31E1Q6ZUB1 1445 aa19.99■□□□□ 0.79
CTNS-202ENST00000381870 MPHOSPH9Q99550 1183 aa19.98■□□□□ 0.79
CTNS-202ENST00000381870 HECW1Q76N89 1606 aa19.98■□□□□ 0.79
CTNS-202ENST00000381870 RRP1P56182 461 aaKnown RBP19.98■□□□□ 0.79
CTNS-202ENST00000381870 TOPBP1Q92547 1522 aa19.97■□□□□ 0.79
CTNS-202ENST00000381870 KDM6BO15054 1643 aa19.96■□□□□ 0.79
CTNS-202ENST00000381870 FRAT1Q92837 279 aaPredicted RBP19.96■□□□□ 0.79
CTNS-202ENST00000381870 PNISRQ8TF01 805 aaKnown RBP19.96■□□□□ 0.79
CTNS-202ENST00000381870 NFKBIBQ15653 356 aa19.95■□□□□ 0.78
CTNS-202ENST00000381870 POLR3GLQ9BT43 218 aa19.95■□□□□ 0.78
CTNS-202ENST00000381870 MS4A1P11836 297 aa19.95■□□□□ 0.78
CTNS-202ENST00000381870 EFCAB5A4FU69 1503 aa19.95■□□□□ 0.78
CTNS-202ENST00000381870 RAD54L2Q9Y4B4 1467 aa19.95■□□□□ 0.78
CTNS-202ENST00000381870 SNAPC4Q5SXM2 1469 aa19.94■□□□□ 0.78
CTNS-202ENST00000381870 SKAP1Q86WV1 359 aa19.93■□□□□ 0.78
CTNS-202ENST00000381870 POLR1AO95602 1720 aaPredicted RBP19.93■□□□□ 0.78
CTNS-202ENST00000381870 SLC4A3P48751 1232 aa19.92■□□□□ 0.78
CTNS-202ENST00000381870 MRC2Q9UBG0 1479 aa19.9■□□□□ 0.78
CTNS-202ENST00000381870 TMC1Q8TDI8 760 aa19.9■□□□□ 0.78
CTNS-202ENST00000381870 DDRGK1Q96HY6 314 aa19.89■□□□□ 0.77
CTNS-202ENST00000381870 GCC2Q8IWJ2 1684 aa19.89■□□□□ 0.77
CTNS-202ENST00000381870 POLA1P09884 1462 aaPredicted RBP19.89■□□□□ 0.77
CTNS-202ENST00000381870 DNMBPQ6XZF7 1577 aa19.88■□□□□ 0.77
CTNS-202ENST00000381870 RCAN3Q9UKA8 241 aa19.88■□□□□ 0.77
CTNS-202ENST00000381870 TEX14Q8IWB6 1497 aa19.88■□□□□ 0.77
CTNS-202ENST00000381870 LRRIQ1Q96JM4 1722 aa19.87■□□□□ 0.77
CTNS-202ENST00000381870 RPRD2Q5VT52 1461 aaKnown RBP19.86■□□□□ 0.77
CTNS-202ENST00000381870 TDRD9Q8NDG6 1382 aaKnown RBP19.85■□□□□ 0.77
CTNS-202ENST00000381870 ANKRD30BQ9BXX2 1392 aa19.85■□□□□ 0.77
CTNS-202ENST00000381870 SUPT6HQ7KZ85 1726 aaKnown RBP19.84■□□□□ 0.77
CTNS-202ENST00000381870 BCORL1Q5H9F3 1711 aa19.82■□□□□ 0.76
CTNS-202ENST00000381870 LRPPRCP42704 1394 aaKnown RBP19.81■□□□□ 0.76
CTNS-202ENST00000381870 RSPH6AQ9H0K4 717 aa19.81■□□□□ 0.76
CTNS-202ENST00000381870 UGGT2Q9NYU1 1516 aa19.8■□□□□ 0.76
CTNS-202ENST00000381870 MIA2Q96PC5 1412 aa19.8■□□□□ 0.76
CTNS-202ENST00000381870 DCAF11Q8TEB1 546 aa19.79■□□□□ 0.76
CTNS-202ENST00000381870 PLIN1O60240 522 aa19.79■□□□□ 0.76
CTNS-202ENST00000381870 EHBP1L1Q8N3D4 1523 aa19.78■□□□□ 0.76
CTNS-202ENST00000381870 FAM43AQ8N2R8 423 aa19.78■□□□□ 0.76
CTNS-202ENST00000381870 USP47Q96K76 1375 aa19.77■□□□□ 0.76
CTNS-202ENST00000381870 TCOF1Q13428 1488 aaKnown RBP19.77■□□□□ 0.76
CTNS-202ENST00000381870 GRIN2BQ13224 1484 aa19.77■□□□□ 0.75
CTNS-202ENST00000381870 FRAT2O75474 233 aaPredicted RBP19.77■□□□□ 0.75
CTNS-202ENST00000381870 DAXXQ9UER7 740 aaPredicted RBP19.77■□□□□ 0.75
CTNS-202ENST00000381870 CTTNBP2Q8WZ74 1663 aa19.76■□□□□ 0.75
CTNS-202ENST00000381870 ARHGEF11O15085 1522 aa19.76■□□□□ 0.75
CTNS-202ENST00000381870 MAGI3Q5TCQ9 1506 aa19.76■□□□□ 0.75
CTNS-202ENST00000381870 THOC2Q8NI27 1593 aaKnown RBP19.75■□□□□ 0.75
CTNS-202ENST00000381870 ZNF326Q5BKZ1 582 aaKnown RBP19.75■□□□□ 0.75
CTNS-202ENST00000381870 WDR62O43379 1518 aa19.74■□□□□ 0.75
CTNS-202ENST00000381870 CDCA7LQ96GN5 454 aa19.74■□□□□ 0.75
CTNS-202ENST00000381870 CRBNQ96SW2 442 aa19.74■□□□□ 0.75
CTNS-202ENST00000381870 SLC4A1APQ9BWU0 796 aaKnown RBP19.71■□□□□ 0.75
CTNS-202ENST00000381870 BRD4O60885 1362 aaPredicted RBP19.71■□□□□ 0.75
CTNS-202ENST00000381870 ZNF608Q9ULD9 1512 aaPredicted RBP19.7■□□□□ 0.74
CTNS-202ENST00000381870 MYBBP1AQ9BQG0 1328 aaKnown RBP19.7■□□□□ 0.74
CTNS-202ENST00000381870 KIF15Q9NS87 1388 aa19.7■□□□□ 0.74
CTNS-202ENST00000381870 PKNOX2Q96KN3 472 aa19.68■□□□□ 0.74
CTNS-202ENST00000381870 ARID4BQ4LE39 1312 aaPredicted RBP19.67■□□□□ 0.74
CTNS-202ENST00000381870 PDE3BQ13370 1112 aa19.66■□□□□ 0.74
CTNS-202ENST00000381870 SAMD9Q5K651 1589 aa19.66■□□□□ 0.74
CTNS-202ENST00000381870 ABCA10Q8WWZ4 1543 aa19.66■□□□□ 0.74
CTNS-202ENST00000381870 ROCK2O75116 1388 aaKnown RBP19.65■□□□□ 0.74
CTNS-202ENST00000381870 MBD5Q9P267 1494 aa19.65■□□□□ 0.74
CTNS-202ENST00000381870 KDM5CP41229 1560 aa19.65■□□□□ 0.74
CTNS-202ENST00000381870 C8orf34Q49A92 452 aa19.64■□□□□ 0.73
CTNS-202ENST00000381870 C20orf194Q5TEA3 1177 aa19.64■□□□□ 0.73
CTNS-202ENST00000381870 RALBP1Q15311 655 aa19.63■□□□□ 0.73
CTNS-202ENST00000381870 KDM2BQ8NHM5 1336 aa19.63■□□□□ 0.73
CTNS-202ENST00000381870 TARBP1Q13395 1621 aaKnown RBP19.62■□□□□ 0.73
CTNS-202ENST00000381870 RRAGDQ9NQL2 400 aaPredicted RBP19.62■□□□□ 0.73
CTNS-202ENST00000381870 CUL7Q14999 1698 aa19.62■□□□□ 0.73
CTNS-202ENST00000381870 FAM161AQ3B820 660 aa19.62■□□□□ 0.73
CTNS-202ENST00000381870 GAPVD1Q14C86 1478 aa19.6■□□□□ 0.73
CTNS-202ENST00000381870 IFT140Q96RY7 1462 aa19.59■□□□□ 0.73
CTNS-202ENST00000381870 FBLN2P98095 1184 aa19.59■□□□□ 0.73
CTNS-202ENST00000381870 POGKQ9P215 609 aa19.59■□□□□ 0.73
CTNS-202ENST00000381870 KTN1Q86UP2 1357 aaKnown RBP19.58■□□□□ 0.73
CTNS-202ENST00000381870 KIF14Q15058 1648 aa19.57■□□□□ 0.72
CTNS-202ENST00000381870 DAPK1P53355 1430 aa19.57■□□□□ 0.72
CTNS-202ENST00000381870 ROCK1Q13464 1354 aa19.56■□□□□ 0.72
CTNS-202ENST00000381870 NLRP13Q86W25 1043 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms