RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 DNMT1P26358 1616 aaKnown RBP22.72■■□□□ 1.23
VPS16-203ENST00000380469 ABCC5O15440 1437 aa22.72■■□□□ 1.23
VPS16-203ENST00000380469 NUP153P49790 1475 aaKnown RBP22.72■■□□□ 1.23
VPS16-203ENST00000380469 RAPGEF6Q8TEU7 1601 aa22.72■■□□□ 1.23
VPS16-203ENST00000380469 FOXD1Q16676 465 aa22.71■■□□□ 1.23
VPS16-203ENST00000380469 GRIN2AQ12879 1464 aa22.7■■□□□ 1.22
VPS16-203ENST00000380469 ANKRD30BQ9BXX2 1392 aa22.69■■□□□ 1.22
VPS16-203ENST00000380469 ZNF644Q9H582 1327 aaPredicted RBP22.68■■□□□ 1.22
VPS16-203ENST00000380469 RPRD2Q5VT52 1461 aaKnown RBP22.67■■□□□ 1.22
VPS16-203ENST00000380469 HNRNPUQ00839 825 aaKnown RBP eCLIP22.66■■□□□ 1.22
VPS16-203ENST00000380469 SLC4A1APQ9BWU0 796 aaKnown RBP22.66■■□□□ 1.22
VPS16-203ENST00000380469 CNTLNQ9NXG0 1405 aa22.64■■□□□ 1.22
VPS16-203ENST00000380469 EIF4G3O43432 1585 aaKnown RBP22.63■■□□□ 1.21
VPS16-203ENST00000380469 TROQ12816 1431 aaPredicted RBP22.62■■□□□ 1.21
VPS16-203ENST00000380469 NCOA1Q15788 1441 aa22.61■■□□□ 1.21
VPS16-203ENST00000380469 CFDP1Q9UEE9 299 aaPredicted RBP22.6■■□□□ 1.21
VPS16-203ENST00000380469 CCDC7Q96M83 1385 aa22.6■■□□□ 1.21
VPS16-203ENST00000380469 PRG4Q92954 1404 aaPredicted RBP22.59■■□□□ 1.21
VPS16-203ENST00000380469 NBPF8Q3BBV2 869 aa22.59■■□□□ 1.21
VPS16-203ENST00000380469 CHMP7Q8WUX9 453 aaPredicted RBP22.59■■□□□ 1.21
VPS16-203ENST00000380469 TEX14Q8IWB6 1497 aa22.59■■□□□ 1.21
VPS16-203ENST00000380469 MAGI1Q96QZ7 1491 aaPredicted RBP22.58■■□□□ 1.2
VPS16-203ENST00000380469 CAMSAP2Q08AD1 1489 aa22.57■■□□□ 1.2
VPS16-203ENST00000380469 ITSN2Q9NZM3 1697 aa22.57■■□□□ 1.2
VPS16-203ENST00000380469 C11orf95C9JLR9 678 aaPredicted RBP22.57■■□□□ 1.2
VPS16-203ENST00000380469 GPATCH8Q9UKJ3 1502 aaKnown RBP22.53■■□□□ 1.2
VPS16-203ENST00000380469 ADGBQ8N7X0 1667 aa22.53■■□□□ 1.2
VPS16-203ENST00000380469 PRKRIP1Q9H875 184 aaPredicted RBP22.53■■□□□ 1.2
VPS16-203ENST00000380469 CARMIL2Q6F5E8 1435 aa22.53■■□□□ 1.2
VPS16-203ENST00000380469 SYNJ2O15056 1496 aa22.53■■□□□ 1.2
VPS16-203ENST00000380469 PLB1Q6P1J6 1458 aa22.53■■□□□ 1.2
VPS16-203ENST00000380469 ZNF777Q9ULD5 760 aaPredicted RBP22.52■■□□□ 1.2
VPS16-203ENST00000380469 PZPP20742 1482 aa22.52■■□□□ 1.2
VPS16-203ENST00000380469 CEP170Q5SW79 1584 aa22.52■■□□□ 1.2
VPS16-203ENST00000380469 ERCC6Q03468 1493 aa22.51■■□□□ 1.19
VPS16-203ENST00000380469 ADCY10Q96PN6 1610 aa22.5■■□□□ 1.19
VPS16-203ENST00000380469 SPATA31E1Q6ZUB1 1445 aa22.5■■□□□ 1.19
VPS16-203ENST00000380469 FBLN2P98095 1184 aa22.5■■□□□ 1.19
VPS16-203ENST00000380469 ADGRL2O95490 1459 aa22.49■■□□□ 1.19
VPS16-203ENST00000380469 ANKRD30AQ9BXX3 1397 aa22.48■■□□□ 1.19
VPS16-203ENST00000380469 KIF7Q2M1P5 1343 aa22.47■■□□□ 1.19
VPS16-203ENST00000380469 KIF14Q15058 1648 aa22.47■■□□□ 1.19
VPS16-203ENST00000380469 CCDC184Q52MB2 194 aa22.47■■□□□ 1.19
VPS16-203ENST00000380469 JPH4Q96JJ6 628 aa22.47■■□□□ 1.19
VPS16-203ENST00000380469 KIAA1107Q9UPP5 1409 aa22.47■■□□□ 1.19
VPS16-203ENST00000380469 POLR1AO95602 1720 aaPredicted RBP22.46■■□□□ 1.19
VPS16-203ENST00000380469 MRS2Q9HD23 443 aa22.46■■□□□ 1.19
VPS16-203ENST00000380469 CROCC2H7BZ55 1655 aa22.45■■□□□ 1.18
VPS16-203ENST00000380469 FAM9BQ8IZU0 186 aa22.43■■□□□ 1.18
VPS16-203ENST00000380469 PLEKHD1A6NEE1 506 aa22.43■■□□□ 1.18
VPS16-203ENST00000380469 PKD2Q13563 968 aa22.43■■□□□ 1.18
VPS16-203ENST00000380469 RBM19Q9Y4C8 960 aaKnown RBP22.42■■□□□ 1.18
VPS16-203ENST00000380469 NUP160Q12769 1436 aa22.41■■□□□ 1.18
VPS16-203ENST00000380469 ERICH6BQ5W0A0 696 aa22.41■■□□□ 1.18
VPS16-203ENST00000380469 ANKRD50Q9ULJ7 1429 aa22.4■■□□□ 1.18
VPS16-203ENST00000380469 MBD5Q9P267 1494 aa22.4■■□□□ 1.18
VPS16-203ENST00000380469 ANP32EQ9BTT0 268 aa22.39■■□□□ 1.17
VPS16-203ENST00000380469 IRX6P78412 446 aaPredicted RBP22.37■■□□□ 1.17
VPS16-203ENST00000380469 ZBED9Q6R2W3 1325 aa22.37■■□□□ 1.17
VPS16-203ENST00000380469 ZNF326Q5BKZ1 582 aaKnown RBP22.36■■□□□ 1.17
VPS16-203ENST00000380469 USP47Q96K76 1375 aa22.35■■□□□ 1.17
VPS16-203ENST00000380469 ABCA8O94911 1581 aa22.34■■□□□ 1.17
VPS16-203ENST00000380469 SHANK2Q9UPX8 1470 aa22.34■■□□□ 1.17
VPS16-203ENST00000380469 CDC42BPAQ5VT25 1732 aa22.34■■□□□ 1.17
VPS16-203ENST00000380469 ARID4BQ4LE39 1312 aaPredicted RBP22.33■■□□□ 1.17
VPS16-203ENST00000380469 TSPY4P0CV99 314 aa22.33■■□□□ 1.17
VPS16-203ENST00000380469 TSPY10P0CW01 314 aa22.33■■□□□ 1.17
VPS16-203ENST00000380469 C9orf84Q5VXU9 1444 aa22.33■■□□□ 1.17
VPS16-203ENST00000380469 NUP155O75694 1391 aa22.33■■□□□ 1.16
VPS16-203ENST00000380469 ABCC10Q5T3U5 1492 aa22.33■■□□□ 1.16
VPS16-203ENST00000380469 ATP10BO94823 1461 aa22.32■■□□□ 1.16
VPS16-203ENST00000380469 PPP4R2Q9NY27 417 aa22.3■■□□□ 1.16
VPS16-203ENST00000380469 POLR3GLQ9BT43 218 aa22.3■■□□□ 1.16
VPS16-203ENST00000380469 UHRF1BP1Q6BDS2 1440 aa22.28■■□□□ 1.16
VPS16-203ENST00000380469 DHX29Q7Z478 1369 aaKnown RBP22.28■■□□□ 1.16
VPS16-203ENST00000380469 KDM5CP41229 1560 aa22.27■■□□□ 1.16
VPS16-203ENST00000380469 BCORL1Q5H9F3 1711 aa22.27■■□□□ 1.16
VPS16-203ENST00000380469 RALGAPBQ86X10 1494 aa22.25■■□□□ 1.15
VPS16-203ENST00000380469 KDM5DQ9BY66 1539 aa22.25■■□□□ 1.15
VPS16-203ENST00000380469 ROCK2O75116 1388 aaKnown RBP22.24■■□□□ 1.15
VPS16-203ENST00000380469 ARHGEF12Q9NZN5 1544 aa22.24■■□□□ 1.15
VPS16-203ENST00000380469 CARD11Q9BXL7 1154 aa22.23■■□□□ 1.15
VPS16-203ENST00000380469 KIF15Q9NS87 1388 aa22.23■■□□□ 1.15
VPS16-203ENST00000380469 HNRNPMP52272 730 aaKnown RBP eCLIP22.23■■□□□ 1.15
VPS16-203ENST00000380469 ARHGEF5Q12774 1597 aa22.21■■□□□ 1.15
VPS16-203ENST00000380469 CNGB1Q14028 1251 aaPredicted RBP22.2■■□□□ 1.14
VPS16-203ENST00000380469 PTPRGP23470 1445 aa22.19■■□□□ 1.14
VPS16-203ENST00000380469 KDM2AQ9Y2K7 1162 aa22.18■■□□□ 1.14
VPS16-203ENST00000380469 RSPH4AQ5TD94 716 aa22.17■■□□□ 1.14
VPS16-203ENST00000380469 DCAF11Q8TEB1 546 aa22.15■■□□□ 1.14
VPS16-203ENST00000380469 SMG6Q86US8 1419 aaKnown RBP22.15■■□□□ 1.14
VPS16-203ENST00000380469 CCDC141Q6ZP82 1450 aa22.15■■□□□ 1.14
VPS16-203ENST00000380469 TMC1Q8TDI8 760 aa22.13■■□□□ 1.13
VPS16-203ENST00000380469 ST20-MTHFSA0A0A6YYL1 179 aa22.12■■□□□ 1.13
VPS16-203ENST00000380469 FANCIQ9NVI1 1328 aa22.12■■□□□ 1.13
VPS16-203ENST00000380469 NUDCQ9Y266 331 aa22.11■■□□□ 1.13
VPS16-203ENST00000380469 SAMD9LQ8IVG5 1584 aa22.1■■□□□ 1.13
VPS16-203ENST00000380469 B4GALNT3Q6L9W6 998 aa22.1■■□□□ 1.13
VPS16-203ENST00000380469 PNISRQ8TF01 805 aaKnown RBP22.1■■□□□ 1.13
VPS16-203ENST00000380469 PREX2Q70Z35 1606 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms