RNA–Protein interactions for RNA: ENST00000378910.9

NPHS1-202, Transcript of NPHS1, nephrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHS1, Length 4,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1-202ENST00000378910 PLCD3Q8N3E9 789 aa15.23■□□□□ 0.03
NPHS1-202ENST00000378910 PLPPR3Q6T4P5 718 aa15.22■□□□□ 0.03
NPHS1-202ENST00000378910 CARD11Q9BXL7 1154 aa15.22■□□□□ 0.03
NPHS1-202ENST00000378910 TOP2AP11388 1531 aaKnown RBP15.22■□□□□ 0.03
NPHS1-202ENST00000378910 TCERG1O14776 1098 aaKnown RBP15.2■□□□□ 0.02
NPHS1-202ENST00000378910 NUDCQ9Y266 331 aa15.2■□□□□ 0.02
NPHS1-202ENST00000378910 TNNT3P45378 269 aaPredicted RBP15.19■□□□□ 0.02
NPHS1-202ENST00000378910 TSPY4P0CV99 314 aa15.18■□□□□ 0.02
NPHS1-202ENST00000378910 TSPY10P0CW01 314 aa15.18■□□□□ 0.02
NPHS1-202ENST00000378910 CARMIL1Q5VZK9 1371 aa15.18■□□□□ 0.02
NPHS1-202ENST00000378910 ARHGAP35Q9NRY4 1499 aa15.18■□□□□ 0.02
NPHS1-202ENST00000378910 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.16■□□□□ 0.02
NPHS1-202ENST00000378910 RCAN3Q9UKA8 241 aa15.14■□□□□ 0.01
NPHS1-202ENST00000378910 FOXD1Q16676 465 aa15.13■□□□□ 0.01
NPHS1-202ENST00000378910 FAM13BQ9NYF5 915 aa15.13■□□□□ 0.01
NPHS1-202ENST00000378910 RGL3Q3MIN7 710 aa15.12■□□□□ 0.01
NPHS1-202ENST00000378910 CUX2O14529 1486 aa15.12■□□□□ 0.01
NPHS1-202ENST00000378910 MAP7D2Q96T17 732 aa15.12■□□□□ 0.01
NPHS1-202ENST00000378910 PRKRIP1Q9H875 184 aaPredicted RBP15.12■□□□□ 0.01
NPHS1-202ENST00000378910 PDCL3Q9H2J4 239 aa15.12■□□□□ 0.01
NPHS1-202ENST00000378910 ZBED9Q6R2W3 1325 aa15.11■□□□□ 0.01
NPHS1-202ENST00000378910 C11orf95C9JLR9 678 aaPredicted RBP15.11■□□□□ 0.01
NPHS1-202ENST00000378910 L3MBTL2Q969R5 705 aa15.11■□□□□ 0.01
NPHS1-202ENST00000378910 FRAT1Q92837 279 aaPredicted RBP15.1■□□□□ 0.01
NPHS1-202ENST00000378910 IPO4Q8TEX9 1081 aaKnown RBP15.1■□□□□ 0.01
NPHS1-202ENST00000378910 ZHX1Q9UKY1 873 aaPredicted RBP15.1■□□□□ 0.01
NPHS1-202ENST00000378910 MAPK8IP2Q13387 824 aaPredicted RBP15.09■□□□□ 0.01
NPHS1-202ENST00000378910 TPM2P07951 284 aa15.08■□□□□ 0
NPHS1-202ENST00000378910 CC2D1BQ5T0F9 858 aaKnown RBP15.08■□□□□ 0
NPHS1-202ENST00000378910 MPHOSPH9Q99550 1183 aa15.08■□□□□ 0
NPHS1-202ENST00000378910 HSP90B1P14625 803 aaKnown RBP15.07■□□□□ 0
NPHS1-202ENST00000378910 KNSTRNQ9Y448 316 aa15.07■□□□□ 0
NPHS1-202ENST00000378910 MSNP26038 577 aaKnown RBP15.07■□□□□ 0
NPHS1-202ENST00000378910 CALD1Q05682 793 aaKnown RBP15.06■□□□□ 0
NPHS1-202ENST00000378910 FTSJ3Q8IY81 847 aaKnown RBP15.06■□□□□ 0
NPHS1-202ENST00000378910 CFDP1Q9UEE9 299 aaPredicted RBP15.06■□□□□ 0
NPHS1-202ENST00000378910 FMN1Q68DA7 1419 aa15.06■□□□□ 0
NPHS1-202ENST00000378910 PDE4AP27815 886 aa15.06■□□□□ 0
NPHS1-202ENST00000378910 IRX3P78415 501 aaPredicted RBP15.04■□□□□ -0
NPHS1-202ENST00000378910 PTMAP06454 111 aaKnown RBP15.04■□□□□ -0
NPHS1-202ENST00000378910 WWC1Q8IX03 1113 aa15.04■□□□□ -0
NPHS1-202ENST00000378910 KIF21BO75037 1637 aa15.04■□□□□ -0
NPHS1-202ENST00000378910 AEBP1Q8IUX7 1158 aa15.02■□□□□ -0
NPHS1-202ENST00000378910 GOLGA6L22H0YM25 854 aa15.02□□□□□ -0.01
NPHS1-202ENST00000378910 GOLGA6L3A6NEY3 463 aa15.01□□□□□ -0.01
NPHS1-202ENST00000378910 CHGAP10645 457 aaKnown RBP15□□□□□ -0.01
NPHS1-202ENST00000378910 DCAF11Q8TEB1 546 aa15□□□□□ -0.01
NPHS1-202ENST00000378910 EXOC6Q8TAG9 804 aa15□□□□□ -0.01
NPHS1-202ENST00000378910 E9PSI1 815 aa14.99□□□□□ -0.01
NPHS1-202ENST00000378910 RALBP1Q15311 655 aa14.99□□□□□ -0.01
NPHS1-202ENST00000378910 SLKQ9H2G2 1235 aaPredicted RBP14.99□□□□□ -0.01
NPHS1-202ENST00000378910 MYH16Q9H6N6 1097 aa14.99□□□□□ -0.01
NPHS1-202ENST00000378910 NEUROD2Q15784 382 aa14.98□□□□□ -0.01
NPHS1-202ENST00000378910 MTERF4Q7Z6M4 381 aaKnown RBP14.98□□□□□ -0.01
NPHS1-202ENST00000378910 VGLL3A8MV65 326 aa14.98□□□□□ -0.01
NPHS1-202ENST00000378910 ZFP91Q96JP5 570 aaPredicted RBP14.98□□□□□ -0.01
NPHS1-202ENST00000378910 SLC4A3P48751 1232 aa14.97□□□□□ -0.01
NPHS1-202ENST00000378910 KTN1Q86UP2 1357 aaKnown RBP14.97□□□□□ -0.01
NPHS1-202ENST00000378910 SMARCA2P51531 1590 aa14.97□□□□□ -0.01
NPHS1-202ENST00000378910 PDE3BQ13370 1112 aa14.96□□□□□ -0.01
NPHS1-202ENST00000378910 NFKBIBQ15653 356 aa14.96□□□□□ -0.01
NPHS1-202ENST00000378910 CDCA8Q53HL2 280 aa14.96□□□□□ -0.01
NPHS1-202ENST00000378910 CCDC9Q9Y3X0 531 aaKnown RBP14.96□□□□□ -0.01
NPHS1-202ENST00000378910 ZNF771Q7L3S4 317 aaPredicted RBP14.96□□□□□ -0.01
NPHS1-202ENST00000378910 RRBP1Q9P2E9 1410 aaKnown RBP14.96□□□□□ -0.01
NPHS1-202ENST00000378910 RRP1P56182 461 aaKnown RBP14.96□□□□□ -0.02
NPHS1-202ENST00000378910 PKD2Q13563 968 aa14.95□□□□□ -0.02
NPHS1-202ENST00000378910 BCCIPQ9P287 314 aaKnown RBP eCLIP14.95□□□□□ -0.02
NPHS1-202ENST00000378910 SPRYD3Q8NCJ5 442 aa14.95□□□□□ -0.02
NPHS1-202ENST00000378910 FHOD3Q2V2M9 1422 aa14.95□□□□□ -0.02
NPHS1-202ENST00000378910 SMARCA4P51532 1647 aa14.94□□□□□ -0.02
NPHS1-202ENST00000378910 CCDC18Q5T9S5 1454 aa14.94□□□□□ -0.02
NPHS1-202ENST00000378910 NLRP13Q86W25 1043 aa14.94□□□□□ -0.02
NPHS1-202ENST00000378910 PRDM10Q9NQV6 1147 aa14.93□□□□□ -0.02
NPHS1-202ENST00000378910 MS4A1P11836 297 aa14.93□□□□□ -0.02
NPHS1-202ENST00000378910 WASHC2AQ641Q2 1341 aa14.93□□□□□ -0.02
NPHS1-202ENST00000378910 PLEKHD1A6NEE1 506 aa14.93□□□□□ -0.02
NPHS1-202ENST00000378910 GZF1Q9H116 711 aaPredicted RBP14.93□□□□□ -0.02
NPHS1-202ENST00000378910 TAF3Q5VWG9 929 aa14.92□□□□□ -0.02
NPHS1-202ENST00000378910 TMF1P82094 1093 aa14.92□□□□□ -0.02
NPHS1-202ENST00000378910 PHLDB1Q86UU1 1377 aa14.91□□□□□ -0.02
NPHS1-202ENST00000378910 PLIN1O60240 522 aa14.9□□□□□ -0.02
NPHS1-202ENST00000378910 RSPH4AQ5TD94 716 aa14.9□□□□□ -0.02
NPHS1-202ENST00000378910 CCDC7Q96M83 1385 aa14.89□□□□□ -0.03
NPHS1-202ENST00000378910 HSP90AB1P08238 724 aaKnown RBP14.89□□□□□ -0.03
NPHS1-202ENST00000378910 HSCBQ8IWL3 235 aa14.89□□□□□ -0.03
NPHS1-202ENST00000378910 CNTLNQ9NXG0 1405 aa14.89□□□□□ -0.03
NPHS1-202ENST00000378910 ROCK2O75116 1388 aaKnown RBP14.88□□□□□ -0.03
NPHS1-202ENST00000378910 CNPY4Q8N129 248 aa14.88□□□□□ -0.03
NPHS1-202ENST00000378910 ARAP1Q96P48 1450 aa14.87□□□□□ -0.03
NPHS1-202ENST00000378910 MYBBP1AQ9BQG0 1328 aaKnown RBP14.87□□□□□ -0.03
NPHS1-202ENST00000378910 FAM193AP78312 1265 aa14.87□□□□□ -0.03
NPHS1-202ENST00000378910 FAM161AQ3B820 660 aa14.87□□□□□ -0.03
NPHS1-202ENST00000378910 CFAP53Q96M91 514 aa14.87□□□□□ -0.03
NPHS1-202ENST00000378910 CLGNO14967 610 aa14.86□□□□□ -0.03
NPHS1-202ENST00000378910 KIF15Q9NS87 1388 aa14.86□□□□□ -0.03
NPHS1-202ENST00000378910 CRBNQ96SW2 442 aa14.86□□□□□ -0.03
NPHS1-202ENST00000378910 WASHC2CQ9Y4E1 1318 aa14.86□□□□□ -0.03
NPHS1-202ENST00000378910 WDR97A6NE52 1622 aa14.85□□□□□ -0.03
NPHS1-202ENST00000378910 KIF7Q2M1P5 1343 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms