RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 HIRIP3Q9BW71 556 aaPredicted RBP11.15□□□□□ -0.62
PTPRR-203ENST00000378778 ROCK1Q13464 1354 aa11.14□□□□□ -0.63
PTPRR-203ENST00000378778 RPRD2Q5VT52 1461 aaKnown RBP11.14□□□□□ -0.63
PTPRR-203ENST00000378778 ANP32AP39687 249 aaKnown RBP11.14□□□□□ -0.63
PTPRR-203ENST00000378778 FANCD2Q9BXW9 1451 aa11.13□□□□□ -0.63
PTPRR-203ENST00000378778 SPATA31E1Q6ZUB1 1445 aa11.13□□□□□ -0.63
PTPRR-203ENST00000378778 DENND4BO75064 1496 aaPredicted RBP11.12□□□□□ -0.63
PTPRR-203ENST00000378778 TOPBP1Q92547 1522 aa11.12□□□□□ -0.63
PTPRR-203ENST00000378778 IPO9Q96P70 1041 aaKnown RBP11.12□□□□□ -0.63
PTPRR-203ENST00000378778 KTN1Q86UP2 1357 aaKnown RBP11.12□□□□□ -0.63
PTPRR-203ENST00000378778 POLA1P09884 1462 aaPredicted RBP11.11□□□□□ -0.63
PTPRR-203ENST00000378778 USP35Q9P2H5 1018 aa11.11□□□□□ -0.63
PTPRR-203ENST00000378778 MRS2Q9HD23 443 aa11.11□□□□□ -0.63
PTPRR-203ENST00000378778 NUDCQ9Y266 331 aa11.1□□□□□ -0.63
PTPRR-203ENST00000378778 ROCK2O75116 1388 aaKnown RBP11.1□□□□□ -0.63
PTPRR-203ENST00000378778 TEX14Q8IWB6 1497 aa11.1□□□□□ -0.63
PTPRR-203ENST00000378778 RTL5Q5HYW3 569 aaPredicted RBP11.1□□□□□ -0.63
PTPRR-203ENST00000378778 ANKRD30BQ9BXX2 1392 aa11.08□□□□□ -0.64
PTPRR-203ENST00000378778 IRX6P78412 446 aaPredicted RBP11.07□□□□□ -0.64
PTPRR-203ENST00000378778 ATP1B4Q9UN42 357 aaPredicted RBP11.07□□□□□ -0.64
PTPRR-203ENST00000378778 ZBTB47Q9UFB7 747 aaPredicted RBP11.07□□□□□ -0.64
PTPRR-203ENST00000378778 B4GALNT3Q6L9W6 998 aa11.06□□□□□ -0.64
PTPRR-203ENST00000378778 DNMT1P26358 1616 aaKnown RBP11.06□□□□□ -0.64
PTPRR-203ENST00000378778 MPHOSPH9Q99550 1183 aa11.06□□□□□ -0.64
PTPRR-203ENST00000378778 KIF14Q15058 1648 aa11.05□□□□□ -0.64
PTPRR-203ENST00000378778 P3H3Q8IVL6 736 aa11.05□□□□□ -0.64
PTPRR-203ENST00000378778 INSRP06213 1382 aa11.05□□□□□ -0.64
PTPRR-203ENST00000378778 NESP48681 1621 aa11.05□□□□□ -0.64
PTPRR-203ENST00000378778 MBD5Q9P267 1494 aa11.05□□□□□ -0.64
PTPRR-203ENST00000378778 ZMYM4Q5VZL5 1548 aa11.05□□□□□ -0.64
PTPRR-203ENST00000378778 MS4A1P11836 297 aa11.05□□□□□ -0.64
PTPRR-203ENST00000378778 CCDC136Q96JN2 1154 aa11.05□□□□□ -0.64
PTPRR-203ENST00000378778 TCERG1O14776 1098 aaKnown RBP11.04□□□□□ -0.64
PTPRR-203ENST00000378778 L3MBTL2Q969R5 705 aa11.04□□□□□ -0.64
PTPRR-203ENST00000378778 KIF7Q2M1P5 1343 aa11.04□□□□□ -0.64
PTPRR-203ENST00000378778 FAM9BQ8IZU0 186 aa11.04□□□□□ -0.64
PTPRR-203ENST00000378778 RAD54L2Q9Y4B4 1467 aa11.03□□□□□ -0.64
PTPRR-203ENST00000378778 DHX29Q7Z478 1369 aaKnown RBP11.03□□□□□ -0.64
PTPRR-203ENST00000378778 MAGI3Q5TCQ9 1506 aa11.03□□□□□ -0.64
PTPRR-203ENST00000378778 KDM6BO15054 1643 aa11.03□□□□□ -0.64
PTPRR-203ENST00000378778 LAMC3Q9Y6N6 1575 aa11.02□□□□□ -0.65
PTPRR-203ENST00000378778 ADGBQ8N7X0 1667 aa11.02□□□□□ -0.65
PTPRR-203ENST00000378778 EPRSP07814 1512 aaKnown RBP11.02□□□□□ -0.65
PTPRR-203ENST00000378778 PPM1GO15355 546 aaPredicted RBP11.02□□□□□ -0.65
PTPRR-203ENST00000378778 CCDC184Q52MB2 194 aa11.01□□□□□ -0.65
PTPRR-203ENST00000378778 C11orf95C9JLR9 678 aaPredicted RBP11.01□□□□□ -0.65
PTPRR-203ENST00000378778 KDM5CP41229 1560 aa11□□□□□ -0.65
PTPRR-203ENST00000378778 PDE3BQ13370 1112 aa11□□□□□ -0.65
PTPRR-203ENST00000378778 WDR62O43379 1518 aa11□□□□□ -0.65
PTPRR-203ENST00000378778 GAPVD1Q14C86 1478 aa11□□□□□ -0.65
PTPRR-203ENST00000378778 DAPK1P53355 1430 aa11□□□□□ -0.65
PTPRR-203ENST00000378778 UHRF1BP1Q6BDS2 1440 aa11□□□□□ -0.65
PTPRR-203ENST00000378778 BRD4O60885 1362 aaPredicted RBP11□□□□□ -0.65
PTPRR-203ENST00000378778 ARHGEF12Q9NZN5 1544 aa11□□□□□ -0.65
PTPRR-203ENST00000378778 LRPPRCP42704 1394 aaKnown RBP10.99□□□□□ -0.65
PTPRR-203ENST00000378778 PAK3O75914 559 aaPredicted RBP10.99□□□□□ -0.65
PTPRR-203ENST00000378778 NPM3O75607 178 aaKnown RBP10.98□□□□□ -0.65
PTPRR-203ENST00000378778 IQGAP2Q13576 1575 aa10.97□□□□□ -0.65
PTPRR-203ENST00000378778 DDRGK1Q96HY6 314 aa10.97□□□□□ -0.65
PTPRR-203ENST00000378778 KIF15Q9NS87 1388 aa10.97□□□□□ -0.65
PTPRR-203ENST00000378778 RALGAPBQ86X10 1494 aa10.97□□□□□ -0.65
PTPRR-203ENST00000378778 ITSN2Q9NZM3 1697 aa10.97□□□□□ -0.65
PTPRR-203ENST00000378778 RRP7BPQ9NSQ0 103 aa10.97□□□□□ -0.65
PTPRR-203ENST00000378778 ADGRL2O95490 1459 aa10.97□□□□□ -0.65
PTPRR-203ENST00000378778 E9PCH4 1651 aa10.97□□□□□ -0.65
PTPRR-203ENST00000378778 WASHC2CQ9Y4E1 1318 aa10.96□□□□□ -0.65
PTPRR-203ENST00000378778 RALBP1Q15311 655 aa10.96□□□□□ -0.65
PTPRR-203ENST00000378778 BCORL1Q5H9F3 1711 aa10.95□□□□□ -0.66
PTPRR-203ENST00000378778 NBPF8Q3BBV2 869 aa10.95□□□□□ -0.66
PTPRR-203ENST00000378778 PNISRQ8TF01 805 aaKnown RBP10.95□□□□□ -0.66
PTPRR-203ENST00000378778 NBR1Q14596 966 aa10.95□□□□□ -0.66
PTPRR-203ENST00000378778 KIAA1107Q9UPP5 1409 aa10.95□□□□□ -0.66
PTPRR-203ENST00000378778 PLEKHH2Q8IVE3 1493 aa10.95□□□□□ -0.66
PTPRR-203ENST00000378778 ABCC5O15440 1437 aa10.94□□□□□ -0.66
PTPRR-203ENST00000378778 CROCC2H7BZ55 1655 aa10.94□□□□□ -0.66
PTPRR-203ENST00000378778 USP47Q96K76 1375 aa10.94□□□□□ -0.66
PTPRR-203ENST00000378778 PZPP20742 1482 aa10.93□□□□□ -0.66
PTPRR-203ENST00000378778 URB2Q14146 1524 aaKnown RBP10.93□□□□□ -0.66
PTPRR-203ENST00000378778 PBRM1Q86U86 1689 aa10.93□□□□□ -0.66
PTPRR-203ENST00000378778 RRP1P56182 461 aaKnown RBP10.92□□□□□ -0.66
PTPRR-203ENST00000378778 MYBBP1AQ9BQG0 1328 aaKnown RBP10.92□□□□□ -0.66
PTPRR-203ENST00000378778 KDM5DQ9BY66 1539 aa10.92□□□□□ -0.66
PTPRR-203ENST00000378778 ADCY10Q96PN6 1610 aa10.91□□□□□ -0.66
PTPRR-203ENST00000378778 PPP4R3CPQ6ZMV5 832 aa10.91□□□□□ -0.66
PTPRR-203ENST00000378778 BACH2Q9BYV9 841 aa10.91□□□□□ -0.66
PTPRR-203ENST00000378778 TARBP1Q13395 1621 aaKnown RBP10.91□□□□□ -0.66
PTPRR-203ENST00000378778 TMC1Q8TDI8 760 aa10.9□□□□□ -0.66
PTPRR-203ENST00000378778 ADAMTS12P58397 1594 aa10.9□□□□□ -0.66
PTPRR-203ENST00000378778 LAMC1P11047 1609 aa10.9□□□□□ -0.67
PTPRR-203ENST00000378778 PDE4AP27815 886 aa10.89□□□□□ -0.67
PTPRR-203ENST00000378778 CHIC2Q9UKJ5 165 aa10.89□□□□□ -0.67
PTPRR-203ENST00000378778 SHANK2Q9UPX8 1470 aa10.88□□□□□ -0.67
PTPRR-203ENST00000378778 PDS5BQ9NTI5 1447 aa10.88□□□□□ -0.67
PTPRR-203ENST00000378778 DAXXQ9UER7 740 aaPredicted RBP10.88□□□□□ -0.67
PTPRR-203ENST00000378778 CDK13Q14004 1512 aaKnown RBP10.87□□□□□ -0.67
PTPRR-203ENST00000378778 RCAN3Q9UKA8 241 aa10.87□□□□□ -0.67
PTPRR-203ENST00000378778 RAPGEF6Q8TEU7 1601 aa10.87□□□□□ -0.67
PTPRR-203ENST00000378778 TAOK2Q9UL54 1235 aa10.86□□□□□ -0.67
PTPRR-203ENST00000378778 NEFMP07197 916 aa10.86□□□□□ -0.67
PTPRR-203ENST00000378778 NLRP13Q86W25 1043 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms