RNA–Protein interactions for RNA: ENST00000378633.5

CDK11A-205, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best) BASIC

Gene CDK11A, Length 2,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-205ENST00000378633 CEP170Q5SW79 1584 aa26.29■■□□□ 1.8
CDK11A-205ENST00000378633 ERCC6Q03468 1493 aa26.28■■□□□ 1.8
CDK11A-205ENST00000378633 TROQ12816 1431 aaPredicted RBP26.28■■□□□ 1.8
CDK11A-205ENST00000378633 SYNJ2O15056 1496 aa26.28■■□□□ 1.8
CDK11A-205ENST00000378633 FOXD1Q16676 465 aa26.27■■□□□ 1.8
CDK11A-205ENST00000378633 ANKRD30BQ9BXX2 1392 aa26.26■■□□□ 1.79
CDK11A-205ENST00000378633 L3MBTL2Q969R5 705 aa26.26■■□□□ 1.79
CDK11A-205ENST00000378633 CHMP7Q8WUX9 453 aaPredicted RBP26.26■■□□□ 1.79
CDK11A-205ENST00000378633 PRG4Q92954 1404 aaPredicted RBP26.25■■□□□ 1.79
CDK11A-205ENST00000378633 WASHC2AQ641Q2 1341 aa26.24■■□□□ 1.79
CDK11A-205ENST00000378633 EIF4G2P78344 907 aaKnown RBP eCLIP26.23■■□□□ 1.79
CDK11A-205ENST00000378633 RPRD2Q5VT52 1461 aaKnown RBP26.23■■□□□ 1.79
CDK11A-205ENST00000378633 PLB1Q6P1J6 1458 aa26.23■■□□□ 1.79
CDK11A-205ENST00000378633 CAMSAP2Q08AD1 1489 aa26.21■■□□□ 1.79
CDK11A-205ENST00000378633 ITSN2Q9NZM3 1697 aa26.19■■□□□ 1.78
CDK11A-205ENST00000378633 ADCY10Q96PN6 1610 aa26.18■■□□□ 1.78
CDK11A-205ENST00000378633 GPATCH8Q9UKJ3 1502 aaKnown RBP26.18■■□□□ 1.78
CDK11A-205ENST00000378633 NUP160Q12769 1436 aa26.18■■□□□ 1.78
CDK11A-205ENST00000378633 CFDP1Q9UEE9 299 aaPredicted RBP26.17■■□□□ 1.78
CDK11A-205ENST00000378633 TEX14Q8IWB6 1497 aa26.17■■□□□ 1.78
CDK11A-205ENST00000378633 CARMIL2Q6F5E8 1435 aa26.17■■□□□ 1.78
CDK11A-205ENST00000378633 SLC4A1APQ9BWU0 796 aaKnown RBP26.16■■□□□ 1.78
CDK11A-205ENST00000378633 FKBP8Q14318 412 aa26.15■■□□□ 1.78
CDK11A-205ENST00000378633 KIF14Q15058 1648 aa26.15■■□□□ 1.78
CDK11A-205ENST00000378633 NCOA1Q15788 1441 aa26.14■■□□□ 1.77
CDK11A-205ENST00000378633 JPH4Q96JJ6 628 aa26.14■■□□□ 1.77
CDK11A-205ENST00000378633 FBLN2P98095 1184 aa26.13■■□□□ 1.77
CDK11A-205ENST00000378633 ADGBQ8N7X0 1667 aa26.12■■□□□ 1.77
CDK11A-205ENST00000378633 PZPP20742 1482 aa26.12■■□□□ 1.77
CDK11A-205ENST00000378633 NBPF8Q3BBV2 869 aa26.11■■□□□ 1.77
CDK11A-205ENST00000378633 ADGRL2O95490 1459 aa26.11■■□□□ 1.77
CDK11A-205ENST00000378633 CNTLNQ9NXG0 1405 aa26.1■■□□□ 1.77
CDK11A-205ENST00000378633 CROCC2H7BZ55 1655 aa26.08■■□□□ 1.77
CDK11A-205ENST00000378633 CCDC7Q96M83 1385 aa26.07■■□□□ 1.76
CDK11A-205ENST00000378633 BCANQ96GW7 911 aa26.07■■□□□ 1.76
CDK11A-205ENST00000378633 TSHZ2Q9NRE2 1034 aa26.07■■□□□ 1.76
CDK11A-205ENST00000378633 C11orf95C9JLR9 678 aaPredicted RBP26.06■■□□□ 1.76
CDK11A-205ENST00000378633 NEFLP07196 543 aa26.06■■□□□ 1.76
CDK11A-205ENST00000378633 ZNF777Q9ULD5 760 aaPredicted RBP26.06■■□□□ 1.76
CDK11A-205ENST00000378633 ABCA8O94911 1581 aa26.04■■□□□ 1.76
CDK11A-205ENST00000378633 SPATA31E1Q6ZUB1 1445 aa26.03■■□□□ 1.76
CDK11A-205ENST00000378633 ANKRD30AQ9BXX3 1397 aa26.02■■□□□ 1.76
CDK11A-205ENST00000378633 KIAA1107Q9UPP5 1409 aa26.01■■□□□ 1.75
CDK11A-205ENST00000378633 PLEKHD1A6NEE1 506 aa25.99■■□□□ 1.75
CDK11A-205ENST00000378633 ABCC10Q5T3U5 1492 aa25.99■■□□□ 1.75
CDK11A-205ENST00000378633 HNRNPUQ00839 825 aaKnown RBP eCLIP25.98■■□□□ 1.75
CDK11A-205ENST00000378633 ATP10BO94823 1461 aa25.98■■□□□ 1.75
CDK11A-205ENST00000378633 CDC42BPAQ5VT25 1732 aa25.98■■□□□ 1.75
CDK11A-205ENST00000378633 MBD5Q9P267 1494 aa25.97■■□□□ 1.75
CDK11A-205ENST00000378633 ANKRD50Q9ULJ7 1429 aa25.96■■□□□ 1.75
CDK11A-205ENST00000378633 POLR1AO95602 1720 aaPredicted RBP25.95■■□□□ 1.74
CDK11A-205ENST00000378633 SHANK2Q9UPX8 1470 aa25.94■■□□□ 1.74
CDK11A-205ENST00000378633 PRKRIP1Q9H875 184 aaPredicted RBP25.94■■□□□ 1.74
CDK11A-205ENST00000378633 MYT1Q01538 1121 aa25.93■■□□□ 1.74
CDK11A-205ENST00000378633 KIF7Q2M1P5 1343 aa25.93■■□□□ 1.74
CDK11A-205ENST00000378633 PKD2Q13563 968 aa25.93■■□□□ 1.74
CDK11A-205ENST00000378633 C9orf84Q5VXU9 1444 aa25.9■■□□□ 1.74
CDK11A-205ENST00000378633 CCDC184Q52MB2 194 aa25.9■■□□□ 1.74
CDK11A-205ENST00000378633 NUP155O75694 1391 aa25.83■■□□□ 1.73
CDK11A-205ENST00000378633 KDM5DQ9BY66 1539 aa25.83■■□□□ 1.73
CDK11A-205ENST00000378633 TSPY4P0CV99 314 aa25.82■■□□□ 1.72
CDK11A-205ENST00000378633 TSPY10P0CW01 314 aa25.82■■□□□ 1.72
CDK11A-205ENST00000378633 PTPRGP23470 1445 aa25.81■■□□□ 1.72
CDK11A-205ENST00000378633 ARHGEF5Q12774 1597 aa25.81■■□□□ 1.72
CDK11A-205ENST00000378633 USP47Q96K76 1375 aa25.81■■□□□ 1.72
CDK11A-205ENST00000378633 MRS2Q9HD23 443 aa25.8■■□□□ 1.72
CDK11A-205ENST00000378633 UHRF1BP1Q6BDS2 1440 aa25.79■■□□□ 1.72
CDK11A-205ENST00000378633 KIF15Q9NS87 1388 aa25.78■■□□□ 1.72
CDK11A-205ENST00000378633 ZNF326Q5BKZ1 582 aaKnown RBP25.77■■□□□ 1.72
CDK11A-205ENST00000378633 KDM5CP41229 1560 aa25.77■■□□□ 1.72
CDK11A-205ENST00000378633 HNRNPMP52272 730 aaKnown RBP eCLIP25.77■■□□□ 1.72
CDK11A-205ENST00000378633 BCORL1Q5H9F3 1711 aa25.77■■□□□ 1.72
CDK11A-205ENST00000378633 FAM9BQ8IZU0 186 aa25.76■■□□□ 1.71
CDK11A-205ENST00000378633 ARHGEF12Q9NZN5 1544 aa25.75■■□□□ 1.71
CDK11A-205ENST00000378633 RALGAPBQ86X10 1494 aa25.74■■□□□ 1.71
CDK11A-205ENST00000378633 DHX29Q7Z478 1369 aaKnown RBP25.73■■□□□ 1.71
CDK11A-205ENST00000378633 ARID4BQ4LE39 1312 aaPredicted RBP25.73■■□□□ 1.71
CDK11A-205ENST00000378633 SAMD9LQ8IVG5 1584 aa25.73■■□□□ 1.71
CDK11A-205ENST00000378633 CCDC141Q6ZP82 1450 aa25.72■■□□□ 1.71
CDK11A-205ENST00000378633 PREX2Q70Z35 1606 aa25.71■■□□□ 1.71
CDK11A-205ENST00000378633 CDC42BPBQ9Y5S2 1711 aa25.71■■□□□ 1.71
CDK11A-205ENST00000378633 ZBED9Q6R2W3 1325 aa25.71■■□□□ 1.71
CDK11A-205ENST00000378633 RSPH4AQ5TD94 716 aa25.68■■□□□ 1.7
CDK11A-205ENST00000378633 IRX6P78412 446 aaPredicted RBP25.64■■□□□ 1.7
CDK11A-205ENST00000378633 CHD1O14646 1710 aa25.64■■□□□ 1.7
CDK11A-205ENST00000378633 ERICH6BQ5W0A0 696 aa25.64■■□□□ 1.69
CDK11A-205ENST00000378633 CARD11Q9BXL7 1154 aa25.64■■□□□ 1.69
CDK11A-205ENST00000378633 FAM135AQ9P2D6 1515 aa25.63■■□□□ 1.69
CDK11A-205ENST00000378633 POLR3GLQ9BT43 218 aa25.62■■□□□ 1.69
CDK11A-205ENST00000378633 ROCK2O75116 1388 aaKnown RBP25.62■■□□□ 1.69
CDK11A-205ENST00000378633 SHROOM2Q13796 1616 aa25.61■■□□□ 1.69
CDK11A-205ENST00000378633 RBM19Q9Y4C8 960 aaKnown RBP25.59■■□□□ 1.69
CDK11A-205ENST00000378633 SYCP2Q9BX26 1530 aa25.59■■□□□ 1.69
CDK11A-205ENST00000378633 DCAF11Q8TEB1 546 aa25.59■■□□□ 1.69
CDK11A-205ENST00000378633 KDM2AQ9Y2K7 1162 aa25.59■■□□□ 1.69
CDK11A-205ENST00000378633 TTC37Q6PGP7 1564 aa25.58■■□□□ 1.69
CDK11A-205ENST00000378633 MAST1Q9Y2H9 1570 aa25.58■■□□□ 1.69
CDK11A-205ENST00000378633 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.57■■□□□ 1.68
CDK11A-205ENST00000378633 ARHGAP5Q13017 1502 aa25.56■■□□□ 1.68
CDK11A-205ENST00000378633 ST20-MTHFSA0A0A6YYL1 179 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms