RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 CANXP27824 592 aaKnown RBP13.7□□□□□ -0.22
ARHGEF39-201ENST00000378387 KIF7Q2M1P5 1343 aa13.69□□□□□ -0.22
ARHGEF39-201ENST00000378387 GOLGA6L3A6NEY3 463 aa13.69□□□□□ -0.22
ARHGEF39-201ENST00000378387 MTUS2Q5JR59 1369 aa13.69□□□□□ -0.22
ARHGEF39-201ENST00000378387 SMG6Q86US8 1419 aaKnown RBP13.69□□□□□ -0.22
ARHGEF39-201ENST00000378387 UPF2Q9HAU5 1272 aaKnown RBP13.68□□□□□ -0.22
ARHGEF39-201ENST00000378387 SLC4A1APQ9BWU0 796 aaKnown RBP13.67□□□□□ -0.22
ARHGEF39-201ENST00000378387 EIF4G1Q04637 1599 aaKnown RBP13.67□□□□□ -0.22
ARHGEF39-201ENST00000378387 FAM161AQ3B820 660 aa13.67□□□□□ -0.22
ARHGEF39-201ENST00000378387 FHAD1B1AJZ9 1412 aa13.63□□□□□ -0.23
ARHGEF39-201ENST00000378387 CC2D1BQ5T0F9 858 aaKnown RBP13.63□□□□□ -0.23
ARHGEF39-201ENST00000378387 MYH16Q9H6N6 1097 aa13.62□□□□□ -0.23
ARHGEF39-201ENST00000378387 MPHOSPH9Q99550 1183 aa13.62□□□□□ -0.23
ARHGEF39-201ENST00000378387 UNC13AQ9UPW8 1703 aa13.62□□□□□ -0.23
ARHGEF39-201ENST00000378387 RRP9O43818 475 aaKnown RBP13.62□□□□□ -0.23
ARHGEF39-201ENST00000378387 ZBTB7CA1YPR0 619 aa13.61□□□□□ -0.23
ARHGEF39-201ENST00000378387 PNISRQ8TF01 805 aaKnown RBP13.61□□□□□ -0.23
ARHGEF39-201ENST00000378387 SYNJ1O43426 1573 aa13.61□□□□□ -0.23
ARHGEF39-201ENST00000378387 ANP32BQ92688 251 aaKnown RBP13.6□□□□□ -0.23
ARHGEF39-201ENST00000378387 CCDC18Q5T9S5 1454 aa13.6□□□□□ -0.23
ARHGEF39-201ENST00000378387 KIF27Q86VH2 1401 aa13.6□□□□□ -0.23
ARHGEF39-201ENST00000378387 NBPF8Q3BBV2 869 aa13.6□□□□□ -0.23
ARHGEF39-201ENST00000378387 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.6□□□□□ -0.23
ARHGEF39-201ENST00000378387 CUX2O14529 1486 aa13.6□□□□□ -0.23
ARHGEF39-201ENST00000378387 PANK2Q9BZ23 570 aa13.59□□□□□ -0.23
ARHGEF39-201ENST00000378387 ARHGAP35Q9NRY4 1499 aa13.59□□□□□ -0.23
ARHGEF39-201ENST00000378387 RBM10P98175 930 aaKnown RBP13.59□□□□□ -0.23
ARHGEF39-201ENST00000378387 CARD11Q9BXL7 1154 aa13.59□□□□□ -0.23
ARHGEF39-201ENST00000378387 C20orf194Q5TEA3 1177 aa13.58□□□□□ -0.24
ARHGEF39-201ENST00000378387 AMER1Q5JTC6 1135 aaPredicted RBP13.57□□□□□ -0.24
ARHGEF39-201ENST00000378387 FAM13BQ9NYF5 915 aa13.57□□□□□ -0.24
ARHGEF39-201ENST00000378387 CENPQQ7L2Z9 268 aaPredicted RBP13.55□□□□□ -0.24
ARHGEF39-201ENST00000378387 WDR43Q15061 677 aaKnown RBP eCLIP13.54□□□□□ -0.24
ARHGEF39-201ENST00000378387 LRRC9Q6ZRR7 1453 aa13.53□□□□□ -0.24
ARHGEF39-201ENST00000378387 XRCC6P12956 609 aaKnown RBP eCLIP13.53□□□□□ -0.24
ARHGEF39-201ENST00000378387 FMN1Q68DA7 1419 aa13.53□□□□□ -0.24
ARHGEF39-201ENST00000378387 UACAQ9BZF9 1416 aa13.53□□□□□ -0.24
ARHGEF39-201ENST00000378387 ZNF777Q9ULD5 760 aaPredicted RBP13.52□□□□□ -0.25
ARHGEF39-201ENST00000378387 NCLP19338 710 aaKnown RBP13.52□□□□□ -0.25
ARHGEF39-201ENST00000378387 ATAD2BQ9ULI0 1458 aa13.51□□□□□ -0.25
ARHGEF39-201ENST00000378387 KTN1Q86UP2 1357 aaKnown RBP13.5□□□□□ -0.25
ARHGEF39-201ENST00000378387 RNF123Q5XPI4 1314 aa13.5□□□□□ -0.25
ARHGEF39-201ENST00000378387 ESPNB1AK53 854 aa13.5□□□□□ -0.25
ARHGEF39-201ENST00000378387 MSNP26038 577 aaKnown RBP13.5□□□□□ -0.25
ARHGEF39-201ENST00000378387 PDE3BQ13370 1112 aa13.5□□□□□ -0.25
ARHGEF39-201ENST00000378387 MYBBP1AQ9BQG0 1328 aaKnown RBP13.48□□□□□ -0.25
ARHGEF39-201ENST00000378387 FHOD3Q2V2M9 1422 aa13.48□□□□□ -0.25
ARHGEF39-201ENST00000378387 ST20-MTHFSA0A0A6YYL1 179 aa13.48□□□□□ -0.25
ARHGEF39-201ENST00000378387 FOXD4L1Q9NU39 408 aa13.48□□□□□ -0.25
ARHGEF39-201ENST00000378387 NLRP13Q86W25 1043 aa13.47□□□□□ -0.25
ARHGEF39-201ENST00000378387 TRAK2O60296 914 aa13.47□□□□□ -0.25
ARHGEF39-201ENST00000378387 CLCN1P35523 988 aa13.47□□□□□ -0.25
ARHGEF39-201ENST00000378387 NEUROD2Q15784 382 aa13.46□□□□□ -0.25
ARHGEF39-201ENST00000378387 KIAA1211Q6ZU35 1233 aa13.46□□□□□ -0.25
ARHGEF39-201ENST00000378387 CARMIL1Q5VZK9 1371 aa13.46□□□□□ -0.25
ARHGEF39-201ENST00000378387 RALBP1Q15311 655 aa13.46□□□□□ -0.25
ARHGEF39-201ENST00000378387 RGL3Q3MIN7 710 aa13.46□□□□□ -0.25
ARHGEF39-201ENST00000378387 C8orf34Q49A92 452 aa13.46□□□□□ -0.25
ARHGEF39-201ENST00000378387 PRXQ9BXM0 1461 aa13.45□□□□□ -0.26
ARHGEF39-201ENST00000378387 MFAP1P55081 439 aaKnown RBP13.45□□□□□ -0.26
ARHGEF39-201ENST00000378387 USP47Q96K76 1375 aa13.44□□□□□ -0.26
ARHGEF39-201ENST00000378387 MRE11P49959 708 aa13.44□□□□□ -0.26
ARHGEF39-201ENST00000378387 PRDM10Q9NQV6 1147 aa13.44□□□□□ -0.26
ARHGEF39-201ENST00000378387 NCOA1Q15788 1441 aa13.44□□□□□ -0.26
ARHGEF39-201ENST00000378387 DNTTIP2Q5QJE6 756 aaKnown RBP13.43□□□□□ -0.26
ARHGEF39-201ENST00000378387 R3HCC1Q9Y3T6 440 aaKnown RBP13.43□□□□□ -0.26
ARHGEF39-201ENST00000378387 BICRAQ9NZM4 1560 aa13.42□□□□□ -0.26
ARHGEF39-201ENST00000378387 CCDC146Q8IYE0 955 aa13.42□□□□□ -0.26
ARHGEF39-201ENST00000378387 GRPEL1Q9HAV7 217 aa13.42□□□□□ -0.26
ARHGEF39-201ENST00000378387 MCM4P33991 863 aa13.42□□□□□ -0.26
ARHGEF39-201ENST00000378387 ZHX1Q9UKY1 873 aaPredicted RBP13.42□□□□□ -0.26
ARHGEF39-201ENST00000378387 AQRO60306 1485 aaKnown RBP eCLIP13.42□□□□□ -0.26
ARHGEF39-201ENST00000378387 KIF15Q9NS87 1388 aa13.41□□□□□ -0.26
ARHGEF39-201ENST00000378387 SEC24BO95487 1268 aa13.41□□□□□ -0.26
ARHGEF39-201ENST00000378387 FGD6Q6ZV73 1430 aa13.41□□□□□ -0.26
ARHGEF39-201ENST00000378387 COG6Q9Y2V7 657 aa13.41□□□□□ -0.26
ARHGEF39-201ENST00000378387 TNNT2P45379 298 aaPredicted RBP13.41□□□□□ -0.26
ARHGEF39-201ENST00000378387 HSCBQ8IWL3 235 aa13.4□□□□□ -0.26
ARHGEF39-201ENST00000378387 PDCL3Q9H2J4 239 aa13.4□□□□□ -0.26
ARHGEF39-201ENST00000378387 CLUAP1Q96AJ1 413 aa13.4□□□□□ -0.27
ARHGEF39-201ENST00000378387 TIAM1Q13009 1591 aa13.39□□□□□ -0.27
ARHGEF39-201ENST00000378387 HSP90AB1P08238 724 aaKnown RBP13.39□□□□□ -0.27
ARHGEF39-201ENST00000378387 GOLGA2Q08379 1002 aa13.39□□□□□ -0.27
ARHGEF39-201ENST00000378387 TPM2P07951 284 aa13.38□□□□□ -0.27
ARHGEF39-201ENST00000378387 TPRNQ4KMQ1 711 aa13.38□□□□□ -0.27
ARHGEF39-201ENST00000378387 PKD2Q13563 968 aa13.37□□□□□ -0.27
ARHGEF39-201ENST00000378387 NAIPQ13075 1403 aa13.36□□□□□ -0.27
ARHGEF39-201ENST00000378387 BCAR3O75815 825 aa13.36□□□□□ -0.27
ARHGEF39-201ENST00000378387 PTMAP06454 111 aaKnown RBP13.36□□□□□ -0.27
ARHGEF39-201ENST00000378387 CHMP5Q9NZZ3 219 aa13.36□□□□□ -0.27
ARHGEF39-201ENST00000378387 ADAMTS8Q9UP79 889 aa13.36□□□□□ -0.27
ARHGEF39-201ENST00000378387 MAP3K1Q13233 1512 aa13.36□□□□□ -0.27
ARHGEF39-201ENST00000378387 GOLGA6L22H0YM25 854 aa13.35□□□□□ -0.27
ARHGEF39-201ENST00000378387 TBC1D2Q9BYX2 928 aa13.35□□□□□ -0.27
ARHGEF39-201ENST00000378387 HFM1A2PYH4 1435 aa13.35□□□□□ -0.27
ARHGEF39-201ENST00000378387 PTPRKQ15262 1439 aa13.35□□□□□ -0.27
ARHGEF39-201ENST00000378387 FBLN2P98095 1184 aa13.35□□□□□ -0.27
ARHGEF39-201ENST00000378387 BCL2L13Q9BXK5 485 aa13.35□□□□□ -0.27
ARHGEF39-201ENST00000378387 PANK1Q8TE04 598 aa13.35□□□□□ -0.27
ARHGEF39-201ENST00000378387 ERICH3Q5RHP9 1530 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms