RNA–Protein interactions for RNA: ENST00000378313.6

C19orf54-201, Transcript of chromosome 19 open reading frame 54, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C19orf54, Length 2,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-201ENST00000378313 SPATA31E1Q6ZUB1 1445 aa21.81■■□□□ 1.08
C19orf54-201ENST00000378313 KDM6BO15054 1643 aa21.8■■□□□ 1.08
C19orf54-201ENST00000378313 PAK3O75914 559 aaPredicted RBP21.79■■□□□ 1.08
C19orf54-201ENST00000378313 RPRD2Q5VT52 1461 aaKnown RBP21.78■■□□□ 1.08
C19orf54-201ENST00000378313 MAGI3Q5TCQ9 1506 aa21.78■■□□□ 1.08
C19orf54-201ENST00000378313 KIF7Q2M1P5 1343 aa21.77■■□□□ 1.08
C19orf54-201ENST00000378313 IPO9Q96P70 1041 aaKnown RBP21.77■■□□□ 1.08
C19orf54-201ENST00000378313 TEX14Q8IWB6 1497 aa21.76■■□□□ 1.07
C19orf54-201ENST00000378313 NUDCQ9Y266 331 aa21.76■■□□□ 1.07
C19orf54-201ENST00000378313 MIA2Q96PC5 1412 aa21.76■■□□□ 1.07
C19orf54-201ENST00000378313 ANP32AP39687 249 aaKnown RBP21.76■■□□□ 1.07
C19orf54-201ENST00000378313 ANKRD30BQ9BXX2 1392 aa21.75■■□□□ 1.07
C19orf54-201ENST00000378313 ANO8Q9HCE9 1232 aaPredicted RBP21.74■■□□□ 1.07
C19orf54-201ENST00000378313 CHIC2Q9UKJ5 165 aa21.74■■□□□ 1.07
C19orf54-201ENST00000378313 NBR1Q14596 966 aa21.73■■□□□ 1.07
C19orf54-201ENST00000378313 NBPF8Q3BBV2 869 aa21.72■■□□□ 1.07
C19orf54-201ENST00000378313 CCDC136Q96JN2 1154 aa21.71■■□□□ 1.07
C19orf54-201ENST00000378313 ROCK1Q13464 1354 aa21.69■■□□□ 1.06
C19orf54-201ENST00000378313 DHX29Q7Z478 1369 aaKnown RBP21.69■■□□□ 1.06
C19orf54-201ENST00000378313 ZBTB47Q9UFB7 747 aaPredicted RBP21.67■■□□□ 1.06
C19orf54-201ENST00000378313 RTL5Q5HYW3 569 aaPredicted RBP21.66■■□□□ 1.06
C19orf54-201ENST00000378313 FOXD1Q16676 465 aa21.63■■□□□ 1.05
C19orf54-201ENST00000378313 ARID4BQ4LE39 1312 aaPredicted RBP21.62■■□□□ 1.05
C19orf54-201ENST00000378313 EPRSP07814 1512 aaKnown RBP21.62■■□□□ 1.05
C19orf54-201ENST00000378313 NESP48681 1621 aa21.61■■□□□ 1.05
C19orf54-201ENST00000378313 GAPVD1Q14C86 1478 aa21.6■■□□□ 1.05
C19orf54-201ENST00000378313 DAPK1P53355 1430 aa21.58■■□□□ 1.05
C19orf54-201ENST00000378313 MBD5Q9P267 1494 aa21.58■■□□□ 1.04
C19orf54-201ENST00000378313 SALL2Q9Y467 1007 aaPredicted RBP21.58■■□□□ 1.04
C19orf54-201ENST00000378313 LAMC3Q9Y6N6 1575 aa21.57■■□□□ 1.04
C19orf54-201ENST00000378313 DNMT1P26358 1616 aaKnown RBP21.57■■□□□ 1.04
C19orf54-201ENST00000378313 PNISRQ8TF01 805 aaKnown RBP21.56■■□□□ 1.04
C19orf54-201ENST00000378313 BCORL1Q5H9F3 1711 aa21.55■■□□□ 1.04
C19orf54-201ENST00000378313 URB2Q14146 1524 aaKnown RBP21.54■■□□□ 1.04
C19orf54-201ENST00000378313 ROCK2O75116 1388 aaKnown RBP21.54■■□□□ 1.04
C19orf54-201ENST00000378313 TDRD9Q8NDG6 1382 aaKnown RBP21.53■■□□□ 1.04
C19orf54-201ENST00000378313 ABCC5O15440 1437 aa21.53■■□□□ 1.04
C19orf54-201ENST00000378313 SLC4A1APQ9BWU0 796 aaKnown RBP21.52■■□□□ 1.04
C19orf54-201ENST00000378313 TCERG1O14776 1098 aaKnown RBP21.52■■□□□ 1.03
C19orf54-201ENST00000378313 USP47Q96K76 1375 aa21.52■■□□□ 1.03
C19orf54-201ENST00000378313 WDR62O43379 1518 aa21.51■■□□□ 1.03
C19orf54-201ENST00000378313 KIF14Q15058 1648 aa21.51■■□□□ 1.03
C19orf54-201ENST00000378313 USP35Q9P2H5 1018 aa21.51■■□□□ 1.03
C19orf54-201ENST00000378313 LRPPRCP42704 1394 aaKnown RBP21.5■■□□□ 1.03
C19orf54-201ENST00000378313 KDM5CP41229 1560 aa21.5■■□□□ 1.03
C19orf54-201ENST00000378313 CDK13Q14004 1512 aaKnown RBP21.5■■□□□ 1.03
C19orf54-201ENST00000378313 PZPP20742 1482 aa21.48■■□□□ 1.03
C19orf54-201ENST00000378313 KTN1Q86UP2 1357 aaKnown RBP21.48■■□□□ 1.03
C19orf54-201ENST00000378313 TMC1Q8TDI8 760 aa21.47■■□□□ 1.03
C19orf54-201ENST00000378313 IQGAP2Q13576 1575 aa21.45■■□□□ 1.02
C19orf54-201ENST00000378313 MS4A1P11836 297 aa21.45■■□□□ 1.02
C19orf54-201ENST00000378313 RRP1P56182 461 aaKnown RBP21.45■■□□□ 1.02
C19orf54-201ENST00000378313 BRD4O60885 1362 aaPredicted RBP21.45■■□□□ 1.02
C19orf54-201ENST00000378313 KIF15Q9NS87 1388 aa21.44■■□□□ 1.02
C19orf54-201ENST00000378313 IL27Q8NEV9 243 aa21.43■■□□□ 1.02
C19orf54-201ENST00000378313 KIAA1107Q9UPP5 1409 aa21.43■■□□□ 1.02
C19orf54-201ENST00000378313 UHRF1BP1Q6BDS2 1440 aa21.42■■□□□ 1.02
C19orf54-201ENST00000378313 PDE4AP27815 886 aa21.41■■□□□ 1.02
C19orf54-201ENST00000378313 RALGAPBQ86X10 1494 aa21.4■■□□□ 1.02
C19orf54-201ENST00000378313 BACH2Q9BYV9 841 aa21.4■■□□□ 1.02
C19orf54-201ENST00000378313 MYBBP1AQ9BQG0 1328 aaKnown RBP21.39■■□□□ 1.01
C19orf54-201ENST00000378313 PPM1GO15355 546 aaPredicted RBP21.39■■□□□ 1.01
C19orf54-201ENST00000378313 RALBP1Q15311 655 aa21.39■■□□□ 1.01
C19orf54-201ENST00000378313 EXOC6Q8TAG9 804 aa21.37■■□□□ 1.01
C19orf54-201ENST00000378313 ADGBQ8N7X0 1667 aa21.37■■□□□ 1.01
C19orf54-201ENST00000378313 PDE3BQ13370 1112 aa21.37■■□□□ 1.01
C19orf54-201ENST00000378313 WASHC2CQ9Y4E1 1318 aa21.37■■□□□ 1.01
C19orf54-201ENST00000378313 POLR3GLQ9BT43 218 aa21.36■■□□□ 1.01
C19orf54-201ENST00000378313 RCAN3Q9UKA8 241 aa21.36■■□□□ 1.01
C19orf54-201ENST00000378313 NEFMP07197 916 aa21.36■■□□□ 1.01
C19orf54-201ENST00000378313 TARBP1Q13395 1621 aaKnown RBP21.35■■□□□ 1.01
C19orf54-201ENST00000378313 NPM2Q86SE8 214 aaKnown RBP21.35■■□□□ 1.01
C19orf54-201ENST00000378313 CNGB1Q14028 1251 aaPredicted RBP21.34■■□□□ 1.01
C19orf54-201ENST00000378313 ADGRL2O95490 1459 aa21.34■■□□□ 1.01
C19orf54-201ENST00000378313 E9PCH4 1651 aa21.33■■□□□ 1.01
C19orf54-201ENST00000378313 ARHGEF12Q9NZN5 1544 aa21.33■■□□□ 1.01
C19orf54-201ENST00000378313 UBE2Q2Q8WVN8 375 aa21.33■■□□□ 1
C19orf54-201ENST00000378313 ZNF644Q9H582 1327 aaPredicted RBP21.33■■□□□ 1
C19orf54-201ENST00000378313 PBRM1Q86U86 1689 aa21.32■■□□□ 1
C19orf54-201ENST00000378313 ADAMTS12P58397 1594 aa21.29■■□□□ 1
C19orf54-201ENST00000378313 DDRGK1Q96HY6 314 aa21.29■■□□□ 1
C19orf54-201ENST00000378313 LAS1LQ9Y4W2 734 aaKnown RBP21.29■■□□□ 1
C19orf54-201ENST00000378313 ZNF326Q5BKZ1 582 aaKnown RBP21.29■■□□□ 1
C19orf54-201ENST00000378313 CAMSAP2Q08AD1 1489 aa21.28■■□□□ 1
C19orf54-201ENST00000378313 RTN4Q9NQC3 1192 aaKnown RBP21.28■■□□□ 1
C19orf54-201ENST00000378313 PKD2Q13563 968 aa21.27■■□□□ 1
C19orf54-201ENST00000378313 INSRP06213 1382 aa21.27■■□□□ 1
C19orf54-201ENST00000378313 CROCC2H7BZ55 1655 aa21.27■■□□□ 1
C19orf54-201ENST00000378313 CARD11Q9BXL7 1154 aa21.27■■□□□ 1
C19orf54-201ENST00000378313 ITSN2Q9NZM3 1697 aa21.26■□□□□ 0.99
C19orf54-201ENST00000378313 PDS5BQ9NTI5 1447 aa21.26■□□□□ 0.99
C19orf54-201ENST00000378313 NUP153P49790 1475 aaKnown RBP21.26■□□□□ 0.99
C19orf54-201ENST00000378313 SENP3-EIF4A1A0A087X0R7 540 aa21.26■□□□□ 0.99
C19orf54-201ENST00000378313 ZMYM4Q5VZL5 1548 aa21.25■□□□□ 0.99
C19orf54-201ENST00000378313 NLRP13Q86W25 1043 aa21.25■□□□□ 0.99
C19orf54-201ENST00000378313 PARD3Q8TEW0 1356 aa21.24■□□□□ 0.99
C19orf54-201ENST00000378313 ARID3CA6NKF2 412 aa21.24■□□□□ 0.99
C19orf54-201ENST00000378313 RAPGEF6Q8TEU7 1601 aa21.23■□□□□ 0.99
C19orf54-201ENST00000378313 KIAA0556O60303 1618 aa21.22■□□□□ 0.99
C19orf54-201ENST00000378313 ANKRD30AQ9BXX3 1397 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms