RNA–Protein interactions for RNA: ENST00000378154.1

CASK-201, Transcript of calcium/calmodulin dependent serine protein kinase, humanhuman

TSL 5 BASIC

Gene CASK, Length 2,494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASK-201ENST00000378154 TSHZ2Q9NRE2 1034 aa31.87■■■□□ 2.69
CASK-201ENST00000378154 EIF4G3O43432 1585 aaKnown RBP31.86■■■□□ 2.69
CASK-201ENST00000378154 RAPGEF6Q8TEU7 1601 aa31.85■■■□□ 2.69
CASK-201ENST00000378154 ROCK1Q13464 1354 aa31.84■■■□□ 2.69
CASK-201ENST00000378154 EIF4G2P78344 907 aaKnown RBP eCLIP31.83■■■□□ 2.69
CASK-201ENST00000378154 PRG4Q92954 1404 aaPredicted RBP31.83■■■□□ 2.69
CASK-201ENST00000378154 DNMT1P26358 1616 aaKnown RBP31.81■■■□□ 2.68
CASK-201ENST00000378154 ANKRD30BQ9BXX2 1392 aa31.81■■■□□ 2.68
CASK-201ENST00000378154 CDK11AQ9UQ88 783 aaPredicted RBP31.8■■■□□ 2.68
CASK-201ENST00000378154 C11orf95C9JLR9 678 aaPredicted RBP31.78■■■□□ 2.68
CASK-201ENST00000378154 NBPF8Q3BBV2 869 aa31.78■■■□□ 2.68
CASK-201ENST00000378154 CHMP7Q8WUX9 453 aaPredicted RBP31.77■■■□□ 2.68
CASK-201ENST00000378154 PLB1Q6P1J6 1458 aa31.77■■■□□ 2.68
CASK-201ENST00000378154 FBLN2P98095 1184 aa31.76■■■□□ 2.68
CASK-201ENST00000378154 SLC4A1APQ9BWU0 796 aaKnown RBP31.76■■■□□ 2.68
CASK-201ENST00000378154 RPRD2Q5VT52 1461 aaKnown RBP31.73■■■□□ 2.67
CASK-201ENST00000378154 CFDP1Q9UEE9 299 aaPredicted RBP31.72■■■□□ 2.67
CASK-201ENST00000378154 TROQ12816 1431 aaPredicted RBP31.72■■■□□ 2.67
CASK-201ENST00000378154 CEP170Q5SW79 1584 aa31.71■■■□□ 2.67
CASK-201ENST00000378154 ZNF777Q9ULD5 760 aaPredicted RBP31.7■■■□□ 2.67
CASK-201ENST00000378154 ERCC6Q03468 1493 aa31.7■■■□□ 2.67
CASK-201ENST00000378154 NEFLP07196 543 aa31.69■■■□□ 2.66
CASK-201ENST00000378154 TEX14Q8IWB6 1497 aa31.69■■■□□ 2.66
CASK-201ENST00000378154 HNRNPUQ00839 825 aaKnown RBP eCLIP31.69■■■□□ 2.66
CASK-201ENST00000378154 CAMSAP2Q08AD1 1489 aa31.68■■■□□ 2.66
CASK-201ENST00000378154 CCDC184Q52MB2 194 aa31.67■■■□□ 2.66
CASK-201ENST00000378154 MAGI1Q96QZ7 1491 aaPredicted RBP31.66■■■□□ 2.66
CASK-201ENST00000378154 GPATCH8Q9UKJ3 1502 aaKnown RBP31.65■■■□□ 2.66
CASK-201ENST00000378154 SYNJ2O15056 1496 aa31.64■■■□□ 2.66
CASK-201ENST00000378154 CNTLNQ9NXG0 1405 aa31.64■■■□□ 2.66
CASK-201ENST00000378154 KIF14Q15058 1648 aa31.64■■■□□ 2.66
CASK-201ENST00000378154 NCOA1Q15788 1441 aa31.63■■■□□ 2.65
CASK-201ENST00000378154 CCDC7Q96M83 1385 aa31.63■■■□□ 2.65
CASK-201ENST00000378154 PZPP20742 1482 aa31.62■■■□□ 2.65
CASK-201ENST00000378154 JPH4Q96JJ6 628 aa31.62■■■□□ 2.65
CASK-201ENST00000378154 SPATA31E1Q6ZUB1 1445 aa31.54■■■□□ 2.64
CASK-201ENST00000378154 PRKRIP1Q9H875 184 aaPredicted RBP31.53■■■□□ 2.64
CASK-201ENST00000378154 CARMIL2Q6F5E8 1435 aa31.52■■■□□ 2.64
CASK-201ENST00000378154 KIF7Q2M1P5 1343 aa31.52■■■□□ 2.64
CASK-201ENST00000378154 NUP160Q12769 1436 aa31.51■■■□□ 2.64
CASK-201ENST00000378154 ITSN2Q9NZM3 1697 aa31.51■■■□□ 2.64
CASK-201ENST00000378154 PKD2Q13563 968 aa31.49■■■□□ 2.63
CASK-201ENST00000378154 ADCY10Q96PN6 1610 aa31.48■■■□□ 2.63
CASK-201ENST00000378154 ADGRL2O95490 1459 aa31.46■■■□□ 2.63
CASK-201ENST00000378154 ADGBQ8N7X0 1667 aa31.46■■■□□ 2.63
CASK-201ENST00000378154 IRX6P78412 446 aaPredicted RBP31.45■■■□□ 2.63
CASK-201ENST00000378154 ZNF326Q5BKZ1 582 aaKnown RBP31.45■■■□□ 2.63
CASK-201ENST00000378154 KIAA1107Q9UPP5 1409 aa31.45■■■□□ 2.62
CASK-201ENST00000378154 PLEKHD1A6NEE1 506 aa31.44■■■□□ 2.62
CASK-201ENST00000378154 ANKRD30AQ9BXX3 1397 aa31.44■■■□□ 2.62
CASK-201ENST00000378154 FAM9BQ8IZU0 186 aa31.43■■■□□ 2.62
CASK-201ENST00000378154 CROCC2H7BZ55 1655 aa31.42■■■□□ 2.62
CASK-201ENST00000378154 ANKRD50Q9ULJ7 1429 aa31.41■■■□□ 2.62
CASK-201ENST00000378154 MRS2Q9HD23 443 aa31.41■■■□□ 2.62
CASK-201ENST00000378154 ATP10BO94823 1461 aa31.41■■■□□ 2.62
CASK-201ENST00000378154 MBD5Q9P267 1494 aa31.39■■■□□ 2.62
CASK-201ENST00000378154 ABCA8O94911 1581 aa31.37■■■□□ 2.61
CASK-201ENST00000378154 ABCC10Q5T3U5 1492 aa31.37■■■□□ 2.61
CASK-201ENST00000378154 CDC42BPAQ5VT25 1732 aa31.35■■■□□ 2.61
CASK-201ENST00000378154 CNGB1Q14028 1251 aaPredicted RBP31.33■■■□□ 2.61
CASK-201ENST00000378154 NUP155O75694 1391 aa31.33■■■□□ 2.61
CASK-201ENST00000378154 C9orf84Q5VXU9 1444 aa31.32■■■□□ 2.61
CASK-201ENST00000378154 USP47Q96K76 1375 aa31.32■■■□□ 2.6
CASK-201ENST00000378154 POLR3GLQ9BT43 218 aa31.32■■■□□ 2.6
CASK-201ENST00000378154 HNRNPMP52272 730 aaKnown RBP eCLIP31.31■■■□□ 2.6
CASK-201ENST00000378154 POLR1AO95602 1720 aaPredicted RBP31.27■■■□□ 2.6
CASK-201ENST00000378154 BCORL1Q5H9F3 1711 aa31.26■■■□□ 2.6
CASK-201ENST00000378154 RBM19Q9Y4C8 960 aaKnown RBP31.26■■■□□ 2.6
CASK-201ENST00000378154 TSPY4P0CV99 314 aa31.25■■■□□ 2.59
CASK-201ENST00000378154 TSPY10P0CW01 314 aa31.25■■■□□ 2.59
CASK-201ENST00000378154 DHX29Q7Z478 1369 aaKnown RBP31.24■■■□□ 2.59
CASK-201ENST00000378154 SHANK2Q9UPX8 1470 aa31.23■■■□□ 2.59
CASK-201ENST00000378154 KIF15Q9NS87 1388 aa31.2■■■□□ 2.58
CASK-201ENST00000378154 ZBED9Q6R2W3 1325 aa31.2■■■□□ 2.58
CASK-201ENST00000378154 KDM2AQ9Y2K7 1162 aa31.19■■■□□ 2.58
CASK-201ENST00000378154 PTPRGP23470 1445 aa31.18■■■□□ 2.58
CASK-201ENST00000378154 KDM5CP41229 1560 aa31.18■■■□□ 2.58
CASK-201ENST00000378154 UHRF1BP1Q6BDS2 1440 aa31.14■■■□□ 2.58
CASK-201ENST00000378154 CARD11Q9BXL7 1154 aa31.14■■■□□ 2.58
CASK-201ENST00000378154 RALGAPBQ86X10 1494 aa31.11■■■□□ 2.57
CASK-201ENST00000378154 DCAF11Q8TEB1 546 aa31.1■■■□□ 2.57
CASK-201ENST00000378154 KDM5DQ9BY66 1539 aa31.1■■■□□ 2.57
CASK-201ENST00000378154 ANP32EQ9BTT0 268 aa31.07■■■□□ 2.56
CASK-201ENST00000378154 SAMD9LQ8IVG5 1584 aa31.07■■■□□ 2.56
CASK-201ENST00000378154 ARHGEF5Q12774 1597 aa31.06■■■□□ 2.56
CASK-201ENST00000378154 SENP3-EIF4A1A0A087X0R7 540 aa31.06■■■□□ 2.56
CASK-201ENST00000378154 ST20-MTHFSA0A0A6YYL1 179 aa31.06■■■□□ 2.56
CASK-201ENST00000378154 ARHGEF12Q9NZN5 1544 aa31.04■■■□□ 2.56
CASK-201ENST00000378154 CCDC141Q6ZP82 1450 aa31.03■■■□□ 2.56
CASK-201ENST00000378154 ARID4BQ4LE39 1312 aaPredicted RBP31.03■■■□□ 2.56
CASK-201ENST00000378154 CDC42BPBQ9Y5S2 1711 aa31.03■■■□□ 2.56
CASK-201ENST00000378154 PPP4R2Q9NY27 417 aa31.02■■■□□ 2.56
CASK-201ENST00000378154 ERICH6BQ5W0A0 696 aa31■■■□□ 2.55
CASK-201ENST00000378154 FAM135AQ9P2D6 1515 aa30.98■■■□□ 2.55
CASK-201ENST00000378154 PREX2Q70Z35 1606 aa30.97■■■□□ 2.55
CASK-201ENST00000378154 B4GALNT3Q6L9W6 998 aa30.96■■■□□ 2.55
CASK-201ENST00000378154 SYCP2Q9BX26 1530 aa30.94■■■□□ 2.54
CASK-201ENST00000378154 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.94■■■□□ 2.54
CASK-201ENST00000378154 ROCK2O75116 1388 aaKnown RBP30.93■■■□□ 2.54
CASK-201ENST00000378154 PNISRQ8TF01 805 aaKnown RBP30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms