RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 ACIN1Q9UKV3 1341 aaKnown RBP11.49□□□□□ -0.57
CRNKL1-202ENST00000377340 EID1Q9Y6B2 187 aa11.49□□□□□ -0.57
CRNKL1-202ENST00000377340 TOP2BQ02880 1626 aa11.48□□□□□ -0.57
CRNKL1-202ENST00000377340 RAB3GAP2Q9H2M9 1393 aa11.47□□□□□ -0.57
CRNKL1-202ENST00000377340 MRS2Q9HD23 443 aa11.45□□□□□ -0.58
CRNKL1-202ENST00000377340 PEG3Q9GZU2 1588 aa11.45□□□□□ -0.58
CRNKL1-202ENST00000377340 ABCA10Q8WWZ4 1543 aa11.45□□□□□ -0.58
CRNKL1-202ENST00000377340 KNSTRNQ9Y448 316 aa11.45□□□□□ -0.58
CRNKL1-202ENST00000377340 WDR43Q15061 677 aaKnown RBP eCLIP11.44□□□□□ -0.58
CRNKL1-202ENST00000377340 HNRNPUQ00839 825 aaKnown RBP eCLIP11.44□□□□□ -0.58
CRNKL1-202ENST00000377340 PAK3O75914 559 aaPredicted RBP11.44□□□□□ -0.58
CRNKL1-202ENST00000377340 SYNJ2O15056 1496 aa11.43□□□□□ -0.58
CRNKL1-202ENST00000377340 PRXQ9BXM0 1461 aa11.42□□□□□ -0.58
CRNKL1-202ENST00000377340 CDCA8Q53HL2 280 aa11.42□□□□□ -0.58
CRNKL1-202ENST00000377340 ERICH6Q7L0X2 663 aa11.42□□□□□ -0.58
CRNKL1-202ENST00000377340 KIAA0586Q9BVV6 1533 aa11.42□□□□□ -0.58
CRNKL1-202ENST00000377340 ARAP1Q96P48 1450 aa11.41□□□□□ -0.58
CRNKL1-202ENST00000377340 TRAK1Q9UPV9 953 aa11.4□□□□□ -0.58
CRNKL1-202ENST00000377340 L3MBTL2Q969R5 705 aa11.4□□□□□ -0.58
CRNKL1-202ENST00000377340 CC2D1BQ5T0F9 858 aaKnown RBP11.4□□□□□ -0.59
CRNKL1-202ENST00000377340 ZBTB47Q9UFB7 747 aaPredicted RBP11.4□□□□□ -0.59
CRNKL1-202ENST00000377340 GRIN2AQ12879 1464 aa11.39□□□□□ -0.59
CRNKL1-202ENST00000377340 NEUROD2Q15784 382 aa11.39□□□□□ -0.59
CRNKL1-202ENST00000377340 ARXQ96QS3 562 aa11.39□□□□□ -0.59
CRNKL1-202ENST00000377340 NPM2Q86SE8 214 aaKnown RBP11.38□□□□□ -0.59
CRNKL1-202ENST00000377340 SCAPERQ9BY12 1400 aa11.38□□□□□ -0.59
CRNKL1-202ENST00000377340 PHLDB1Q86UU1 1377 aa11.38□□□□□ -0.59
CRNKL1-202ENST00000377340 UACAQ9BZF9 1416 aa11.38□□□□□ -0.59
CRNKL1-202ENST00000377340 PLB1Q6P1J6 1458 aa11.37□□□□□ -0.59
CRNKL1-202ENST00000377340 TMF1P82094 1093 aa11.37□□□□□ -0.59
CRNKL1-202ENST00000377340 KIF15Q9NS87 1388 aa11.37□□□□□ -0.59
CRNKL1-202ENST00000377340 MAGI1Q96QZ7 1491 aaPredicted RBP11.36□□□□□ -0.59
CRNKL1-202ENST00000377340 KIF21BO75037 1637 aa11.36□□□□□ -0.59
CRNKL1-202ENST00000377340 ARHGAP5Q13017 1502 aa11.35□□□□□ -0.59
CRNKL1-202ENST00000377340 CASKIN1Q8WXD9 1431 aa11.35□□□□□ -0.59
CRNKL1-202ENST00000377340 U2SURPO15042 1029 aaKnown RBP11.34□□□□□ -0.59
CRNKL1-202ENST00000377340 MYOM3Q5VTT5 1437 aa11.34□□□□□ -0.59
CRNKL1-202ENST00000377340 MIER1Q8N108 512 aa11.34□□□□□ -0.59
CRNKL1-202ENST00000377340 NGDNQ8NEJ9 315 aaKnown RBP11.33□□□□□ -0.6
CRNKL1-202ENST00000377340 CFAP53Q96M91 514 aa11.33□□□□□ -0.6
CRNKL1-202ENST00000377340 HSPA5P11021 654 aaKnown RBP11.32□□□□□ -0.6
CRNKL1-202ENST00000377340 ROCK2O75116 1388 aaKnown RBP11.32□□□□□ -0.6
CRNKL1-202ENST00000377340 NCOA2Q15596 1464 aa11.32□□□□□ -0.6
CRNKL1-202ENST00000377340 DAXXQ9UER7 740 aaPredicted RBP11.32□□□□□ -0.6
CRNKL1-202ENST00000377340 FGD6Q6ZV73 1430 aa11.32□□□□□ -0.6
CRNKL1-202ENST00000377340 VGFO15240 615 aaPredicted RBP11.32□□□□□ -0.6
CRNKL1-202ENST00000377340 ERICH3Q5RHP9 1530 aa11.31□□□□□ -0.6
CRNKL1-202ENST00000377340 CCDC9Q9Y3X0 531 aaKnown RBP11.31□□□□□ -0.6
CRNKL1-202ENST00000377340 LRRC9Q6ZRR7 1453 aa11.3□□□□□ -0.6
CRNKL1-202ENST00000377340 CCDC144AA2RUR9 1427 aa11.3□□□□□ -0.6
CRNKL1-202ENST00000377340 CD109Q6YHK3 1445 aa11.3□□□□□ -0.6
CRNKL1-202ENST00000377340 CDK13Q14004 1512 aaKnown RBP11.3□□□□□ -0.6
CRNKL1-202ENST00000377340 LAS1LQ9Y4W2 734 aaKnown RBP11.29□□□□□ -0.6
CRNKL1-202ENST00000377340 TROQ12816 1431 aaPredicted RBP11.29□□□□□ -0.6
CRNKL1-202ENST00000377340 IQGAP2Q13576 1575 aa11.29□□□□□ -0.6
CRNKL1-202ENST00000377340 MINK1Q8N4C8 1332 aaPredicted RBP11.28□□□□□ -0.6
CRNKL1-202ENST00000377340 CSB-PGBD3P0DP91 1061 aa11.28□□□□□ -0.6
CRNKL1-202ENST00000377340 CEBPAP49715 358 aaPredicted RBP11.28□□□□□ -0.6
CRNKL1-202ENST00000377340 HDGFL2Q7Z4V5 671 aaPredicted RBP11.28□□□□□ -0.6
CRNKL1-202ENST00000377340 ANKRD50Q9ULJ7 1429 aa11.28□□□□□ -0.6
CRNKL1-202ENST00000377340 MORC1Q86VD1 984 aa11.27□□□□□ -0.6
CRNKL1-202ENST00000377340 TXNDC2Q86VQ3 553 aa11.27□□□□□ -0.6
CRNKL1-202ENST00000377340 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.27□□□□□ -0.6
CRNKL1-202ENST00000377340 TMEM132EQ6IEE7 984 aa11.27□□□□□ -0.61
CRNKL1-202ENST00000377340 NUDCQ9Y266 331 aa11.26□□□□□ -0.61
CRNKL1-202ENST00000377340 ST20-MTHFSA0A0A6YYL1 179 aa11.25□□□□□ -0.61
CRNKL1-202ENST00000377340 TIMELESSQ9UNS1 1208 aa11.25□□□□□ -0.61
CRNKL1-202ENST00000377340 ARHGEF11O15085 1522 aa11.25□□□□□ -0.61
CRNKL1-202ENST00000377340 LTV1Q96GA3 475 aaPredicted RBP11.25□□□□□ -0.61
CRNKL1-202ENST00000377340 SLC26A8Q96RN1 970 aa11.25□□□□□ -0.61
CRNKL1-202ENST00000377340 KIF21AQ7Z4S6 1674 aa11.24□□□□□ -0.61
CRNKL1-202ENST00000377340 FYCO1Q9BQS8 1478 aa11.24□□□□□ -0.61
CRNKL1-202ENST00000377340 MAPK8IP3Q9UPT6 1336 aa11.23□□□□□ -0.61
CRNKL1-202ENST00000377340 EPRSP07814 1512 aaKnown RBP11.23□□□□□ -0.61
CRNKL1-202ENST00000377340 GTF3C3Q9Y5Q9 886 aa11.22□□□□□ -0.61
CRNKL1-202ENST00000377340 EFCAB5A4FU69 1503 aa11.21□□□□□ -0.61
CRNKL1-202ENST00000377340 IRX6P78412 446 aaPredicted RBP11.2□□□□□ -0.62
CRNKL1-202ENST00000377340 THEMISQ8N1K5 641 aaPredicted RBP11.19□□□□□ -0.62
CRNKL1-202ENST00000377340 TERF2IPQ9NYB0 399 aa11.19□□□□□ -0.62
CRNKL1-202ENST00000377340 PROSER2Q86WR7 435 aaPredicted RBP11.19□□□□□ -0.62
CRNKL1-202ENST00000377340 C9orf84Q5VXU9 1444 aa11.19□□□□□ -0.62
CRNKL1-202ENST00000377340 CFAP70Q5T0N1 1121 aa11.19□□□□□ -0.62
CRNKL1-202ENST00000377340 FBXO31Q5XUX0 539 aaPredicted RBP11.18□□□□□ -0.62
CRNKL1-202ENST00000377340 ATF3P18847 181 aa11.18□□□□□ -0.62
CRNKL1-202ENST00000377340 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.18□□□□□ -0.62
CRNKL1-202ENST00000377340 NPHP1O15259 732 aa11.17□□□□□ -0.62
CRNKL1-202ENST00000377340 DHX57Q6P158 1386 aaKnown RBP11.17□□□□□ -0.62
CRNKL1-202ENST00000377340 CUL7Q14999 1698 aa11.17□□□□□ -0.62
CRNKL1-202ENST00000377340 U2AF1L5P0DN76 240 aaPredicted RBP11.17□□□□□ -0.62
CRNKL1-202ENST00000377340 AMPHP49418 695 aa11.17□□□□□ -0.62
CRNKL1-202ENST00000377340 U2AF1Q01081 240 aaKnown RBP eCLIP11.17□□□□□ -0.62
CRNKL1-202ENST00000377340 PSME1Q06323 249 aa11.17□□□□□ -0.62
CRNKL1-202ENST00000377340 NUTM2GQ5VZR2 741 aa11.16□□□□□ -0.62
CRNKL1-202ENST00000377340 RBM33Q96EV2 1170 aaKnown RBP11.16□□□□□ -0.62
CRNKL1-202ENST00000377340 FKBP8Q14318 412 aa11.16□□□□□ -0.62
CRNKL1-202ENST00000377340 ASXL2Q76L83 1435 aa11.15□□□□□ -0.62
CRNKL1-202ENST00000377340 ZNF330Q9Y3S2 320 aaPredicted RBP11.15□□□□□ -0.62
CRNKL1-202ENST00000377340 ANKLE2Q86XL3 938 aa11.15□□□□□ -0.62
CRNKL1-202ENST00000377340 ADGRL1O94910 1474 aa11.15□□□□□ -0.63
CRNKL1-202ENST00000377340 EIF3AQ14152 1382 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms