RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 KIF7Q2M1P5 1343 aa22.5■■□□□ 1.19
TRIM39-201ENST00000376656 AKNAQ7Z591 1439 aa22.49■■□□□ 1.19
TRIM39-201ENST00000376656 SMG6Q86US8 1419 aaKnown RBP22.45■■□□□ 1.18
TRIM39-201ENST00000376656 SPATA31E1Q6ZUB1 1445 aa22.44■■□□□ 1.18
TRIM39-201ENST00000376656 CNGB1Q14028 1251 aaPredicted RBP22.42■■□□□ 1.18
TRIM39-201ENST00000376656 TDRD9Q8NDG6 1382 aaKnown RBP22.42■■□□□ 1.18
TRIM39-201ENST00000376656 RPRD2Q5VT52 1461 aaKnown RBP22.42■■□□□ 1.18
TRIM39-201ENST00000376656 TEX14Q8IWB6 1497 aa22.42■■□□□ 1.18
TRIM39-201ENST00000376656 ANKRD30BQ9BXX2 1392 aa22.42■■□□□ 1.18
TRIM39-201ENST00000376656 ABCA5Q8WWZ7 1642 aa22.41■■□□□ 1.18
TRIM39-201ENST00000376656 POLR1AO95602 1720 aaPredicted RBP22.41■■□□□ 1.18
TRIM39-201ENST00000376656 PRKCSHP14314 528 aaPredicted RBP22.41■■□□□ 1.18
TRIM39-201ENST00000376656 NESP48681 1621 aa22.4■■□□□ 1.18
TRIM39-201ENST00000376656 CCDC136Q96JN2 1154 aa22.39■■□□□ 1.18
TRIM39-201ENST00000376656 NUDCQ9Y266 331 aa22.39■■□□□ 1.18
TRIM39-201ENST00000376656 RNF123Q5XPI4 1314 aa22.38■■□□□ 1.17
TRIM39-201ENST00000376656 SENP3-EIF4A1A0A087X0R7 540 aa22.37■■□□□ 1.17
TRIM39-201ENST00000376656 IPO9Q96P70 1041 aaKnown RBP22.36■■□□□ 1.17
TRIM39-201ENST00000376656 KIF21AQ7Z4S6 1674 aa22.36■■□□□ 1.17
TRIM39-201ENST00000376656 DHX29Q7Z478 1369 aaKnown RBP22.35■■□□□ 1.17
TRIM39-201ENST00000376656 ANP32AP39687 249 aaKnown RBP22.35■■□□□ 1.17
TRIM39-201ENST00000376656 MIA2Q96PC5 1412 aa22.34■■□□□ 1.17
TRIM39-201ENST00000376656 GAPVD1Q14C86 1478 aa22.33■■□□□ 1.17
TRIM39-201ENST00000376656 ARID3CA6NKF2 412 aa22.32■■□□□ 1.16
TRIM39-201ENST00000376656 URB2Q14146 1524 aaKnown RBP22.32■■□□□ 1.16
TRIM39-201ENST00000376656 EPRSP07814 1512 aaKnown RBP22.32■■□□□ 1.16
TRIM39-201ENST00000376656 CDK13Q14004 1512 aaKnown RBP22.32■■□□□ 1.16
TRIM39-201ENST00000376656 POLR3GLQ9BT43 218 aa22.31■■□□□ 1.16
TRIM39-201ENST00000376656 SLC4A1APQ9BWU0 796 aaKnown RBP22.29■■□□□ 1.16
TRIM39-201ENST00000376656 LAMC3Q9Y6N6 1575 aa22.29■■□□□ 1.16
TRIM39-201ENST00000376656 ZBTB47Q9UFB7 747 aaPredicted RBP22.29■■□□□ 1.16
TRIM39-201ENST00000376656 DAPK1P53355 1430 aa22.27■■□□□ 1.16
TRIM39-201ENST00000376656 BCORL1Q5H9F3 1711 aa22.27■■□□□ 1.15
TRIM39-201ENST00000376656 ROCK1Q13464 1354 aa22.25■■□□□ 1.15
TRIM39-201ENST00000376656 RTL5Q5HYW3 569 aaPredicted RBP22.24■■□□□ 1.15
TRIM39-201ENST00000376656 ABCC5O15440 1437 aa22.23■■□□□ 1.15
TRIM39-201ENST00000376656 PNISRQ8TF01 805 aaKnown RBP22.23■■□□□ 1.15
TRIM39-201ENST00000376656 USP47Q96K76 1375 aa22.22■■□□□ 1.15
TRIM39-201ENST00000376656 ZNF644Q9H582 1327 aaPredicted RBP22.21■■□□□ 1.15
TRIM39-201ENST00000376656 ZNF326Q5BKZ1 582 aaKnown RBP22.21■■□□□ 1.15
TRIM39-201ENST00000376656 DNMT1P26358 1616 aaKnown RBP22.2■■□□□ 1.14
TRIM39-201ENST00000376656 WDR62O43379 1518 aa22.19■■□□□ 1.14
TRIM39-201ENST00000376656 MBD5Q9P267 1494 aa22.18■■□□□ 1.14
TRIM39-201ENST00000376656 TMC1Q8TDI8 760 aa22.18■■□□□ 1.14
TRIM39-201ENST00000376656 PZPP20742 1482 aa22.17■■□□□ 1.14
TRIM39-201ENST00000376656 NPM2Q86SE8 214 aaKnown RBP22.15■■□□□ 1.14
TRIM39-201ENST00000376656 IQGAP2Q13576 1575 aa22.14■■□□□ 1.13
TRIM39-201ENST00000376656 KDM5CP41229 1560 aa22.13■■□□□ 1.13
TRIM39-201ENST00000376656 EXOC6Q8TAG9 804 aa22.12■■□□□ 1.13
TRIM39-201ENST00000376656 RRP1P56182 461 aaKnown RBP22.11■■□□□ 1.13
TRIM39-201ENST00000376656 KIF14Q15058 1648 aa22.1■■□□□ 1.13
TRIM39-201ENST00000376656 ARID4BQ4LE39 1312 aaPredicted RBP22.1■■□□□ 1.13
TRIM39-201ENST00000376656 LRPPRCP42704 1394 aaKnown RBP22.09■■□□□ 1.13
TRIM39-201ENST00000376656 KIAA1107Q9UPP5 1409 aa22.07■■□□□ 1.12
TRIM39-201ENST00000376656 TCERG1O14776 1098 aaKnown RBP22.06■■□□□ 1.12
TRIM39-201ENST00000376656 LAS1LQ9Y4W2 734 aaKnown RBP22.06■■□□□ 1.12
TRIM39-201ENST00000376656 IL27Q8NEV9 243 aa22.06■■□□□ 1.12
TRIM39-201ENST00000376656 ROCK2O75116 1388 aaKnown RBP22.06■■□□□ 1.12
TRIM39-201ENST00000376656 PDE4AP27815 886 aa22.05■■□□□ 1.12
TRIM39-201ENST00000376656 KIF15Q9NS87 1388 aa22.05■■□□□ 1.12
TRIM39-201ENST00000376656 ANO8Q9HCE9 1232 aaPredicted RBP22.05■■□□□ 1.12
TRIM39-201ENST00000376656 PKD2Q13563 968 aa22.05■■□□□ 1.12
TRIM39-201ENST00000376656 TARBP1Q13395 1621 aaKnown RBP22.04■■□□□ 1.12
TRIM39-201ENST00000376656 RCAN3Q9UKA8 241 aa22.03■■□□□ 1.12
TRIM39-201ENST00000376656 SALL2Q9Y467 1007 aaPredicted RBP22.03■■□□□ 1.12
TRIM39-201ENST00000376656 BRD4O60885 1362 aaPredicted RBP22.02■■□□□ 1.12
TRIM39-201ENST00000376656 MYBBP1AQ9BQG0 1328 aaKnown RBP22.02■■□□□ 1.12
TRIM39-201ENST00000376656 PBRM1Q86U86 1689 aa22.02■■□□□ 1.12
TRIM39-201ENST00000376656 NEFMP07197 916 aa22.01■■□□□ 1.11
TRIM39-201ENST00000376656 CARD11Q9BXL7 1154 aa22.01■■□□□ 1.11
TRIM39-201ENST00000376656 BACH2Q9BYV9 841 aa22.01■■□□□ 1.11
TRIM39-201ENST00000376656 RALGAPBQ86X10 1494 aa22■■□□□ 1.11
TRIM39-201ENST00000376656 CAMSAP2Q08AD1 1489 aa21.98■■□□□ 1.11
TRIM39-201ENST00000376656 NUP153P49790 1475 aaKnown RBP21.98■■□□□ 1.11
TRIM39-201ENST00000376656 UHRF1BP1Q6BDS2 1440 aa21.98■■□□□ 1.11
TRIM39-201ENST00000376656 ST20-MTHFSA0A0A6YYL1 179 aa21.97■■□□□ 1.11
TRIM39-201ENST00000376656 ADAMTS12P58397 1594 aa21.97■■□□□ 1.11
TRIM39-201ENST00000376656 RALBP1Q15311 655 aa21.97■■□□□ 1.11
TRIM39-201ENST00000376656 RTN4Q9NQC3 1192 aaKnown RBP21.96■■□□□ 1.11
TRIM39-201ENST00000376656 ADGBQ8N7X0 1667 aa21.96■■□□□ 1.11
TRIM39-201ENST00000376656 PDS5BQ9NTI5 1447 aa21.95■■□□□ 1.1
TRIM39-201ENST00000376656 MS4A1P11836 297 aa21.95■■□□□ 1.1
TRIM39-201ENST00000376656 CFDP1Q9UEE9 299 aaPredicted RBP21.95■■□□□ 1.1
TRIM39-201ENST00000376656 USP35Q9P2H5 1018 aa21.93■■□□□ 1.1
TRIM39-201ENST00000376656 ZNF777Q9ULD5 760 aaPredicted RBP21.93■■□□□ 1.1
TRIM39-201ENST00000376656 KDM2AQ9Y2K7 1162 aa21.93■■□□□ 1.1
TRIM39-201ENST00000376656 KTN1Q86UP2 1357 aaKnown RBP21.93■■□□□ 1.1
TRIM39-201ENST00000376656 PRG4Q92954 1404 aaPredicted RBP21.92■■□□□ 1.1
TRIM39-201ENST00000376656 CDCA7LQ96GN5 454 aa21.92■■□□□ 1.1
TRIM39-201ENST00000376656 SKAP1Q86WV1 359 aa21.91■■□□□ 1.1
TRIM39-201ENST00000376656 E9PCH4 1651 aa21.91■■□□□ 1.1
TRIM39-201ENST00000376656 ADGRL2O95490 1459 aa21.91■■□□□ 1.1
TRIM39-201ENST00000376656 RAPGEF6Q8TEU7 1601 aa21.9■■□□□ 1.1
TRIM39-201ENST00000376656 KIAA0556O60303 1618 aa21.9■■□□□ 1.1
TRIM39-201ENST00000376656 DISP1Q96F81 1524 aa21.9■■□□□ 1.1
TRIM39-201ENST00000376656 PLIN1O60240 522 aa21.9■■□□□ 1.1
TRIM39-201ENST00000376656 PDE3BQ13370 1112 aa21.89■■□□□ 1.09
TRIM39-201ENST00000376656 PPM1GO15355 546 aaPredicted RBP21.88■■□□□ 1.09
TRIM39-201ENST00000376656 NLRP13Q86W25 1043 aa21.88■■□□□ 1.09
TRIM39-201ENST00000376656 ANKRD50Q9ULJ7 1429 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms