RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 NUTM2DQ5VT03 806 aaPredicted RBP15.06■□□□□ 0
HDAC6-203ENST00000376619 STAG3Q9UJ98 1225 aa15.06■□□□□ 0
HDAC6-203ENST00000376619 NEUROD2Q15784 382 aa15.06■□□□□ 0
HDAC6-203ENST00000376619 CCDC136Q96JN2 1154 aa15.06■□□□□ 0
HDAC6-203ENST00000376619 LRRC9Q6ZRR7 1453 aa15.06■□□□□ 0
HDAC6-203ENST00000376619 GGT6Q6P531 493 aa15.03■□□□□ -0
HDAC6-203ENST00000376619 SLC24A1O60721 1099 aa15.03■□□□□ -0
HDAC6-203ENST00000376619 DAXXQ9UER7 740 aaPredicted RBP15.02■□□□□ -0
HDAC6-203ENST00000376619 ERICH3Q5RHP9 1530 aa15.02■□□□□ -0
HDAC6-203ENST00000376619 CANXP27824 592 aaKnown RBP15.01□□□□□ -0.01
HDAC6-203ENST00000376619 MLECQ14165 292 aa15□□□□□ -0.01
HDAC6-203ENST00000376619 FGD6Q6ZV73 1430 aa14.99□□□□□ -0.01
HDAC6-203ENST00000376619 ST20-MTHFSA0A0A6YYL1 179 aa14.99□□□□□ -0.01
HDAC6-203ENST00000376619 CCDC18Q5T9S5 1454 aa14.98□□□□□ -0.01
HDAC6-203ENST00000376619 CCDC184Q52MB2 194 aa14.97□□□□□ -0.01
HDAC6-203ENST00000376619 NBR1Q14596 966 aa14.97□□□□□ -0.01
HDAC6-203ENST00000376619 KIAA0586Q9BVV6 1533 aa14.97□□□□□ -0.01
HDAC6-203ENST00000376619 MYT1Q01538 1121 aa14.95□□□□□ -0.02
HDAC6-203ENST00000376619 WDR43Q15061 677 aaKnown RBP eCLIP14.94□□□□□ -0.02
HDAC6-203ENST00000376619 RRBP1Q9P2E9 1410 aaKnown RBP14.94□□□□□ -0.02
HDAC6-203ENST00000376619 PPM1GO15355 546 aaPredicted RBP14.94□□□□□ -0.02
HDAC6-203ENST00000376619 TIMELESSQ9UNS1 1208 aa14.94□□□□□ -0.02
HDAC6-203ENST00000376619 NBPF8Q3BBV2 869 aa14.93□□□□□ -0.02
HDAC6-203ENST00000376619 NCOA2Q15596 1464 aa14.93□□□□□ -0.02
HDAC6-203ENST00000376619 ARID4BQ4LE39 1312 aaPredicted RBP14.93□□□□□ -0.02
HDAC6-203ENST00000376619 KIF3BO15066 747 aa14.92□□□□□ -0.02
HDAC6-203ENST00000376619 ADAMTS12P58397 1594 aa14.92□□□□□ -0.02
HDAC6-203ENST00000376619 PBRM1Q86U86 1689 aa14.91□□□□□ -0.02
HDAC6-203ENST00000376619 CHD1O14646 1710 aa14.91□□□□□ -0.02
HDAC6-203ENST00000376619 ABCA5Q8WWZ7 1642 aa14.91□□□□□ -0.02
HDAC6-203ENST00000376619 STK26Q9P289 416 aa14.9□□□□□ -0.02
HDAC6-203ENST00000376619 WASHC2AQ641Q2 1341 aa14.9□□□□□ -0.02
HDAC6-203ENST00000376619 ESF1Q9H501 851 aaKnown RBP14.89□□□□□ -0.03
HDAC6-203ENST00000376619 KNSTRNQ9Y448 316 aa14.89□□□□□ -0.03
HDAC6-203ENST00000376619 MYOM3Q5VTT5 1437 aa14.89□□□□□ -0.03
HDAC6-203ENST00000376619 ARHGEF11O15085 1522 aa14.88□□□□□ -0.03
HDAC6-203ENST00000376619 C11orf95C9JLR9 678 aaPredicted RBP14.88□□□□□ -0.03
HDAC6-203ENST00000376619 TSHZ2Q9NRE2 1034 aa14.88□□□□□ -0.03
HDAC6-203ENST00000376619 CASKIN1Q8WXD9 1431 aa14.88□□□□□ -0.03
HDAC6-203ENST00000376619 AFAP1Q8N556 730 aa14.87□□□□□ -0.03
HDAC6-203ENST00000376619 CCER2I3L3R5 266 aa14.87□□□□□ -0.03
HDAC6-203ENST00000376619 CUL7Q14999 1698 aa14.87□□□□□ -0.03
HDAC6-203ENST00000376619 CDK13Q14004 1512 aaKnown RBP14.87□□□□□ -0.03
HDAC6-203ENST00000376619 PRKRIP1Q9H875 184 aaPredicted RBP14.86□□□□□ -0.03
HDAC6-203ENST00000376619 IQGAP2Q13576 1575 aa14.86□□□□□ -0.03
HDAC6-203ENST00000376619 ANKRD30AQ9BXX3 1397 aa14.86□□□□□ -0.03
HDAC6-203ENST00000376619 WDR97A6NE52 1622 aa14.85□□□□□ -0.03
HDAC6-203ENST00000376619 ROCK2O75116 1388 aaKnown RBP14.85□□□□□ -0.03
HDAC6-203ENST00000376619 NUP160Q12769 1436 aa14.85□□□□□ -0.03
HDAC6-203ENST00000376619 SOX12O15370 315 aa14.83□□□□□ -0.03
HDAC6-203ENST00000376619 RTL5Q5HYW3 569 aaPredicted RBP14.83□□□□□ -0.03
HDAC6-203ENST00000376619 EFCAB2Q5VUJ9 269 aa14.83□□□□□ -0.03
HDAC6-203ENST00000376619 NBPF1Q3BBV0 1214 aa14.83□□□□□ -0.04
HDAC6-203ENST00000376619 RBM19Q9Y4C8 960 aaKnown RBP14.83□□□□□ -0.04
HDAC6-203ENST00000376619 PLB1Q6P1J6 1458 aa14.82□□□□□ -0.04
HDAC6-203ENST00000376619 CEP170Q5SW79 1584 aa14.82□□□□□ -0.04
HDAC6-203ENST00000376619 TIAM1Q13009 1591 aa14.82□□□□□ -0.04
HDAC6-203ENST00000376619 KIF7Q2M1P5 1343 aa14.81□□□□□ -0.04
HDAC6-203ENST00000376619 CCDC146Q8IYE0 955 aa14.81□□□□□ -0.04
HDAC6-203ENST00000376619 ANP32AP39687 249 aaKnown RBP14.8□□□□□ -0.04
HDAC6-203ENST00000376619 UACAQ9BZF9 1416 aa14.8□□□□□ -0.04
HDAC6-203ENST00000376619 PLIN1O60240 522 aa14.79□□□□□ -0.04
HDAC6-203ENST00000376619 PTPRKQ15262 1439 aa14.79□□□□□ -0.04
HDAC6-203ENST00000376619 PCF11O94913 1555 aaKnown RBP14.79□□□□□ -0.04
HDAC6-203ENST00000376619 FRAT1Q92837 279 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-203ENST00000376619 TRAK1Q9UPV9 953 aa14.78□□□□□ -0.04
HDAC6-203ENST00000376619 SPAG9O60271 1321 aaKnown RBP14.78□□□□□ -0.04
HDAC6-203ENST00000376619 RGS3P49796 1198 aa14.77□□□□□ -0.04
HDAC6-203ENST00000376619 TMF1P82094 1093 aa14.77□□□□□ -0.04
HDAC6-203ENST00000376619 PANK3Q9H999 370 aa14.77□□□□□ -0.05
HDAC6-203ENST00000376619 USP47Q96K76 1375 aa14.76□□□□□ -0.05
HDAC6-203ENST00000376619 ERCC6L2Q5T890 1561 aa14.76□□□□□ -0.05
HDAC6-203ENST00000376619 NUTM2FA1L443 756 aa14.76□□□□□ -0.05
HDAC6-203ENST00000376619 PPP4R2Q9NY27 417 aa14.75□□□□□ -0.05
HDAC6-203ENST00000376619 NAIPQ13075 1403 aa14.75□□□□□ -0.05
HDAC6-203ENST00000376619 ZBTB7CA1YPR0 619 aa14.75□□□□□ -0.05
HDAC6-203ENST00000376619 ARXQ96QS3 562 aa14.75□□□□□ -0.05
HDAC6-203ENST00000376619 U2SURPO15042 1029 aaKnown RBP14.74□□□□□ -0.05
HDAC6-203ENST00000376619 LAS1LQ9Y4W2 734 aaKnown RBP14.74□□□□□ -0.05
HDAC6-203ENST00000376619 FYCO1Q9BQS8 1478 aa14.74□□□□□ -0.05
HDAC6-203ENST00000376619 KIF15Q9NS87 1388 aa14.73□□□□□ -0.05
HDAC6-203ENST00000376619 POGKQ9P215 609 aa14.72□□□□□ -0.05
HDAC6-203ENST00000376619 RRP7AQ9Y3A4 280 aaKnown RBP14.72□□□□□ -0.05
HDAC6-203ENST00000376619 NEFMP07197 916 aa14.71□□□□□ -0.06
HDAC6-203ENST00000376619 SRPK2P78362 688 aaKnown RBP14.71□□□□□ -0.06
HDAC6-203ENST00000376619 AEBP2Q6ZN18 517 aaPredicted RBP14.7□□□□□ -0.06
HDAC6-203ENST00000376619 ANKRD50Q9ULJ7 1429 aa14.7□□□□□ -0.06
HDAC6-203ENST00000376619 C14orf37Q86TY3 774 aa14.7□□□□□ -0.06
HDAC6-203ENST00000376619 TMEM132EQ6IEE7 984 aa14.7□□□□□ -0.06
HDAC6-203ENST00000376619 RAPGEF3O95398 923 aa14.69□□□□□ -0.06
HDAC6-203ENST00000376619 CCDC7Q96M83 1385 aa14.69□□□□□ -0.06
HDAC6-203ENST00000376619 RIMBP3CA6NJZ7 1639 aa14.68□□□□□ -0.06
HDAC6-203ENST00000376619 RIMBP3BA6NNM3 1639 aa14.68□□□□□ -0.06
HDAC6-203ENST00000376619 RIMBP3Q9UFD9 1639 aa14.68□□□□□ -0.06
HDAC6-203ENST00000376619 ZBTB47Q9UFB7 747 aaPredicted RBP14.67□□□□□ -0.06
HDAC6-203ENST00000376619 HFM1A2PYH4 1435 aa14.67□□□□□ -0.06
HDAC6-203ENST00000376619 EPRSP07814 1512 aaKnown RBP14.67□□□□□ -0.06
HDAC6-203ENST00000376619 CDCA7LQ96GN5 454 aa14.66□□□□□ -0.06
HDAC6-203ENST00000376619 WASHC2CQ9Y4E1 1318 aa14.66□□□□□ -0.06
HDAC6-203ENST00000376619 CCDC144AA2RUR9 1427 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms