RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 UACAQ9BZF9 1416 aa14.19□□□□□ -0.14
MDC1-201ENST00000376406 SPAG9O60271 1321 aaKnown RBP14.18□□□□□ -0.14
MDC1-201ENST00000376406 HMGXB3Q12766 1538 aa14.17□□□□□ -0.14
MDC1-201ENST00000376406 NOP58Q9Y2X3 529 aaKnown RBP14.17□□□□□ -0.14
MDC1-201ENST00000376406 SENP3Q9H4L4 574 aaPredicted RBP14.17□□□□□ -0.14
MDC1-201ENST00000376406 SENP3-EIF4A1A0A087X0R7 540 aa14.16□□□□□ -0.14
MDC1-201ENST00000376406 NCLP19338 710 aaKnown RBP14.16□□□□□ -0.14
MDC1-201ENST00000376406 KTN1Q86UP2 1357 aaKnown RBP14.16□□□□□ -0.14
MDC1-201ENST00000376406 PTPRGP23470 1445 aa14.16□□□□□ -0.14
MDC1-201ENST00000376406 HDGFL2Q7Z4V5 671 aaPredicted RBP14.16□□□□□ -0.14
MDC1-201ENST00000376406 MPHOSPH9Q99550 1183 aa14.16□□□□□ -0.14
MDC1-201ENST00000376406 ERICH6BQ5W0A0 696 aa14.15□□□□□ -0.14
MDC1-201ENST00000376406 SRPK2P78362 688 aaKnown RBP14.15□□□□□ -0.15
MDC1-201ENST00000376406 FHOD3Q2V2M9 1422 aa14.14□□□□□ -0.15
MDC1-201ENST00000376406 ROCK2O75116 1388 aaKnown RBP14.14□□□□□ -0.15
MDC1-201ENST00000376406 PKD2Q13563 968 aa14.14□□□□□ -0.15
MDC1-201ENST00000376406 TRIM44Q96DX7 344 aaPredicted RBP14.13□□□□□ -0.15
MDC1-201ENST00000376406 NEUROD2Q15784 382 aa14.13□□□□□ -0.15
MDC1-201ENST00000376406 B4GALNT3Q6L9W6 998 aa14.13□□□□□ -0.15
MDC1-201ENST00000376406 PLEKHG5O94827 1062 aa14.12□□□□□ -0.15
MDC1-201ENST00000376406 FGD5Q6ZNL6 1462 aa14.12□□□□□ -0.15
MDC1-201ENST00000376406 RUSC2Q8N2Y8 1516 aa14.11□□□□□ -0.15
MDC1-201ENST00000376406 MRC2Q9UBG0 1479 aa14.11□□□□□ -0.15
MDC1-201ENST00000376406 CALD1Q05682 793 aaKnown RBP14.11□□□□□ -0.15
MDC1-201ENST00000376406 RALBP1Q15311 655 aa14.11□□□□□ -0.15
MDC1-201ENST00000376406 CUX1P39880 1505 aa14.11□□□□□ -0.15
MDC1-201ENST00000376406 LAS1LQ9Y4W2 734 aaKnown RBP14.11□□□□□ -0.15
MDC1-201ENST00000376406 WASHC2CQ9Y4E1 1318 aa14.11□□□□□ -0.15
MDC1-201ENST00000376406 FRAT1Q92837 279 aaPredicted RBP14.1□□□□□ -0.15
MDC1-201ENST00000376406 GRIN2BQ13224 1484 aa14.09□□□□□ -0.15
MDC1-201ENST00000376406 FOXD1Q16676 465 aa14.09□□□□□ -0.15
MDC1-201ENST00000376406 NUP155O75694 1391 aa14.09□□□□□ -0.15
MDC1-201ENST00000376406 CDK11BP21127 795 aaKnown RBP14.08□□□□□ -0.15
MDC1-201ENST00000376406 TNNT2P45379 298 aaPredicted RBP14.08□□□□□ -0.15
MDC1-201ENST00000376406 KIF21BO75037 1637 aa14.08□□□□□ -0.15
MDC1-201ENST00000376406 LAMC3Q9Y6N6 1575 aa14.08□□□□□ -0.16
MDC1-201ENST00000376406 RGS3P49796 1198 aa14.08□□□□□ -0.16
MDC1-201ENST00000376406 DHX57Q6P158 1386 aaKnown RBP14.07□□□□□ -0.16
MDC1-201ENST00000376406 UNC13AQ9UPW8 1703 aa14.07□□□□□ -0.16
MDC1-201ENST00000376406 KIF3BO15066 747 aa14.07□□□□□ -0.16
MDC1-201ENST00000376406 CFAP44Q96MT7 982 aa14.06□□□□□ -0.16
MDC1-201ENST00000376406 RTF1Q92541 710 aaKnown RBP14.06□□□□□ -0.16
MDC1-201ENST00000376406 IFT140Q96RY7 1462 aa14.06□□□□□ -0.16
MDC1-201ENST00000376406 U2SURPO15042 1029 aaKnown RBP14.06□□□□□ -0.16
MDC1-201ENST00000376406 MORC1Q86VD1 984 aa14.05□□□□□ -0.16
MDC1-201ENST00000376406 GOLGA2Q08379 1002 aa14.05□□□□□ -0.16
MDC1-201ENST00000376406 TERF2IPQ9NYB0 399 aa14.04□□□□□ -0.16
MDC1-201ENST00000376406 CYB5RLQ6IPT4 315 aa14.04□□□□□ -0.16
MDC1-201ENST00000376406 TMX4Q9H1E5 349 aaPredicted RBP14.03□□□□□ -0.16
MDC1-201ENST00000376406 RBM19Q9Y4C8 960 aaKnown RBP14.03□□□□□ -0.16
MDC1-201ENST00000376406 AEBP2Q6ZN18 517 aaPredicted RBP14.02□□□□□ -0.16
MDC1-201ENST00000376406 HDAC5Q9UQL6 1122 aa14.02□□□□□ -0.17
MDC1-201ENST00000376406 HSP90AB1P08238 724 aaKnown RBP14.01□□□□□ -0.17
MDC1-201ENST00000376406 RCAN3Q9UKA8 241 aa14□□□□□ -0.17
MDC1-201ENST00000376406 L3MBTL2Q969R5 705 aa13.98□□□□□ -0.17
MDC1-201ENST00000376406 DNMBPQ6XZF7 1577 aa13.98□□□□□ -0.17
MDC1-201ENST00000376406 SYNJ2O15056 1496 aa13.98□□□□□ -0.17
MDC1-201ENST00000376406 PAK3O75914 559 aaPredicted RBP13.98□□□□□ -0.17
MDC1-201ENST00000376406 ERICH3Q5RHP9 1530 aa13.98□□□□□ -0.17
MDC1-201ENST00000376406 HSCBQ8IWL3 235 aa13.98□□□□□ -0.17
MDC1-201ENST00000376406 CFTRP13569 1480 aa13.97□□□□□ -0.17
MDC1-201ENST00000376406 KIF15Q9NS87 1388 aa13.97□□□□□ -0.17
MDC1-201ENST00000376406 STAC3Q96MF2 364 aa13.97□□□□□ -0.17
MDC1-201ENST00000376406 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.97□□□□□ -0.17
MDC1-201ENST00000376406 PHLDB1Q86UU1 1377 aa13.97□□□□□ -0.17
MDC1-201ENST00000376406 HNRNPMP52272 730 aaKnown RBP eCLIP13.97□□□□□ -0.17
MDC1-201ENST00000376406 STK26Q9P289 416 aa13.97□□□□□ -0.17
MDC1-201ENST00000376406 VGFO15240 615 aaPredicted RBP13.96□□□□□ -0.17
MDC1-201ENST00000376406 CUL7Q14999 1698 aa13.96□□□□□ -0.17
MDC1-201ENST00000376406 PTMAP06454 111 aaKnown RBP13.96□□□□□ -0.17
MDC1-201ENST00000376406 EFCAB5A4FU69 1503 aa13.96□□□□□ -0.17
MDC1-201ENST00000376406 CCDC144AA2RUR9 1427 aa13.96□□□□□ -0.18
MDC1-201ENST00000376406 CSB-PGBD3P0DP91 1061 aa13.96□□□□□ -0.18
MDC1-201ENST00000376406 OS9Q13438 667 aaPredicted RBP13.95□□□□□ -0.18
MDC1-201ENST00000376406 TCERG1O14776 1098 aaKnown RBP13.95□□□□□ -0.18
MDC1-201ENST00000376406 ZRSR1Q15695 479 aaKnown RBP13.95□□□□□ -0.18
MDC1-201ENST00000376406 IPO8O15397 1037 aaKnown RBP13.94□□□□□ -0.18
MDC1-201ENST00000376406 MYOM3Q5VTT5 1437 aa13.94□□□□□ -0.18
MDC1-201ENST00000376406 PLEKHH2Q8IVE3 1493 aa13.93□□□□□ -0.18
MDC1-201ENST00000376406 NGDNQ8NEJ9 315 aaKnown RBP13.92□□□□□ -0.18
MDC1-201ENST00000376406 FAM69CQ0P6D2 419 aa13.92□□□□□ -0.18
MDC1-201ENST00000376406 PDE3BQ13370 1112 aa13.92□□□□□ -0.18
MDC1-201ENST00000376406 TOP2BQ02880 1626 aa13.92□□□□□ -0.18
MDC1-201ENST00000376406 LMOD3Q0VAK6 560 aa13.92□□□□□ -0.18
MDC1-201ENST00000376406 HECW1Q76N89 1606 aa13.91□□□□□ -0.18
MDC1-201ENST00000376406 MCCP23508 829 aa13.91□□□□□ -0.18
MDC1-201ENST00000376406 L1TD1Q5T7N2 865 aaKnown RBP13.9□□□□□ -0.18
MDC1-201ENST00000376406 NLRP13Q86W25 1043 aa13.9□□□□□ -0.18
MDC1-201ENST00000376406 LRRC9Q6ZRR7 1453 aa13.9□□□□□ -0.18
MDC1-201ENST00000376406 MYBBP1AQ9BQG0 1328 aaKnown RBP13.9□□□□□ -0.18
MDC1-201ENST00000376406 SYNJ1O43426 1573 aa13.9□□□□□ -0.18
MDC1-201ENST00000376406 ARHGAP5Q13017 1502 aa13.9□□□□□ -0.19
MDC1-201ENST00000376406 SAFB2Q14151 953 aaKnown RBP eCLIP13.89□□□□□ -0.19
MDC1-201ENST00000376406 PMFBP1Q8TBY8 1022 aa13.89□□□□□ -0.19
MDC1-201ENST00000376406 RWDD1Q9H446 243 aaPredicted RBP13.89□□□□□ -0.19
MDC1-201ENST00000376406 SUPT6HQ7KZ85 1726 aaKnown RBP13.88□□□□□ -0.19
MDC1-201ENST00000376406 PTMSP20962 102 aa13.88□□□□□ -0.19
MDC1-201ENST00000376406 RAD54L2Q9Y4B4 1467 aa13.88□□□□□ -0.19
MDC1-201ENST00000376406 IGF1RP08069 1367 aa13.87□□□□□ -0.19
MDC1-201ENST00000376406 FGD6Q6ZV73 1430 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms