RNA–Protein interactions for RNA: ENST00000376188.1

PPP1R3F-202, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 2,443 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-202ENST00000376188 KIF14Q15058 1648 aa26.97■■□□□ 1.91
PPP1R3F-202ENST00000376188 GTF3C3Q9Y5Q9 886 aa26.96■■□□□ 1.91
PPP1R3F-202ENST00000376188 CAMSAP2Q08AD1 1489 aa26.94■■□□□ 1.9
PPP1R3F-202ENST00000376188 DENND4BO75064 1496 aaPredicted RBP26.94■■□□□ 1.9
PPP1R3F-202ENST00000376188 GPATCH8Q9UKJ3 1502 aaKnown RBP26.93■■□□□ 1.9
PPP1R3F-202ENST00000376188 ADGBQ8N7X0 1667 aa26.93■■□□□ 1.9
PPP1R3F-202ENST00000376188 TRIM52Q96A61 297 aa26.92■■□□□ 1.9
PPP1R3F-202ENST00000376188 CHD1O14646 1710 aa26.91■■□□□ 1.9
PPP1R3F-202ENST00000376188 ZNF644Q9H582 1327 aaPredicted RBP26.9■■□□□ 1.9
PPP1R3F-202ENST00000376188 CROCC2H7BZ55 1655 aa26.89■■□□□ 1.9
PPP1R3F-202ENST00000376188 CFDP1Q9UEE9 299 aaPredicted RBP26.89■■□□□ 1.9
PPP1R3F-202ENST00000376188 KDM5BQ9UGL1 1544 aa26.88■■□□□ 1.89
PPP1R3F-202ENST00000376188 MPHOSPH9Q99550 1183 aa26.86■■□□□ 1.89
PPP1R3F-202ENST00000376188 CDC42BPAQ5VT25 1732 aa26.86■■□□□ 1.89
PPP1R3F-202ENST00000376188 ATP10BO94823 1461 aa26.86■■□□□ 1.89
PPP1R3F-202ENST00000376188 PLEKHD1A6NEE1 506 aa26.84■■□□□ 1.89
PPP1R3F-202ENST00000376188 ADGRL2O95490 1459 aa26.82■■□□□ 1.88
PPP1R3F-202ENST00000376188 ABCC10Q5T3U5 1492 aa26.81■■□□□ 1.88
PPP1R3F-202ENST00000376188 PTPRGP23470 1445 aa26.8■■□□□ 1.88
PPP1R3F-202ENST00000376188 SHROOM2Q13796 1616 aa26.79■■□□□ 1.88
PPP1R3F-202ENST00000376188 NCOA1Q15788 1441 aa26.78■■□□□ 1.88
PPP1R3F-202ENST00000376188 DDX10Q13206 875 aaKnown RBP26.77■■□□□ 1.88
PPP1R3F-202ENST00000376188 SHANK2Q9UPX8 1470 aa26.73■■□□□ 1.87
PPP1R3F-202ENST00000376188 ZNF777Q9ULD5 760 aaPredicted RBP26.73■■□□□ 1.87
PPP1R3F-202ENST00000376188 ANKRD30BQ9BXX2 1392 aa26.72■■□□□ 1.87
PPP1R3F-202ENST00000376188 ANKRD30AQ9BXX3 1397 aa26.72■■□□□ 1.87
PPP1R3F-202ENST00000376188 RPRD2Q5VT52 1461 aaKnown RBP26.71■■□□□ 1.87
PPP1R3F-202ENST00000376188 HIRIP3Q9BW71 556 aaPredicted RBP26.69■■□□□ 1.86
PPP1R3F-202ENST00000376188 SLC4A1APQ9BWU0 796 aaKnown RBP26.67■■□□□ 1.86
PPP1R3F-202ENST00000376188 PZPP20742 1482 aa26.67■■□□□ 1.86
PPP1R3F-202ENST00000376188 ARHGEF5Q12774 1597 aa26.65■■□□□ 1.86
PPP1R3F-202ENST00000376188 FOXD1Q16676 465 aa26.64■■□□□ 1.86
PPP1R3F-202ENST00000376188 PREX2Q70Z35 1606 aa26.64■■□□□ 1.85
PPP1R3F-202ENST00000376188 TEX14Q8IWB6 1497 aa26.62■■□□□ 1.85
PPP1R3F-202ENST00000376188 C9orf84Q5VXU9 1444 aa26.62■■□□□ 1.85
PPP1R3F-202ENST00000376188 L3MBTL2Q969R5 705 aa26.61■■□□□ 1.85
PPP1R3F-202ENST00000376188 ANKRD50Q9ULJ7 1429 aa26.61■■□□□ 1.85
PPP1R3F-202ENST00000376188 CDC42BPBQ9Y5S2 1711 aa26.61■■□□□ 1.85
PPP1R3F-202ENST00000376188 ABCC2Q92887 1545 aa26.58■■□□□ 1.85
PPP1R3F-202ENST00000376188 KIAA1107Q9UPP5 1409 aa26.57■■□□□ 1.84
PPP1R3F-202ENST00000376188 ANP32CO43423 234 aa26.56■■□□□ 1.84
PPP1R3F-202ENST00000376188 SAMD9LQ8IVG5 1584 aa26.55■■□□□ 1.84
PPP1R3F-202ENST00000376188 CCER2I3L3R5 266 aa26.55■■□□□ 1.84
PPP1R3F-202ENST00000376188 TSPY4P0CV99 314 aa26.55■■□□□ 1.84
PPP1R3F-202ENST00000376188 TSPY10P0CW01 314 aa26.55■■□□□ 1.84
PPP1R3F-202ENST00000376188 EIF4G2P78344 907 aaKnown RBP eCLIP26.54■■□□□ 1.846e-6■■■■□ 25.1
PPP1R3F-202ENST00000376188 MBD5Q9P267 1494 aa26.53■■□□□ 1.84
PPP1R3F-202ENST00000376188 ERCC6L2Q5T890 1561 aa26.53■■□□□ 1.84
PPP1R3F-202ENST00000376188 KDM5DQ9BY66 1539 aa26.52■■□□□ 1.84
PPP1R3F-202ENST00000376188 HSPA5P11021 654 aaKnown RBP26.52■■□□□ 1.84
PPP1R3F-202ENST00000376188 CLASP1Q7Z460 1538 aa26.52■■□□□ 1.84
PPP1R3F-202ENST00000376188 CCDC141Q6ZP82 1450 aa26.52■■□□□ 1.84
PPP1R3F-202ENST00000376188 KCNH8Q96L42 1107 aa26.5■■□□□ 1.83
PPP1R3F-202ENST00000376188 RSPH4AQ5TD94 716 aa26.49■■□□□ 1.83
PPP1R3F-202ENST00000376188 TTC37Q6PGP7 1564 aa26.49■■□□□ 1.83
PPP1R3F-202ENST00000376188 MYO5CQ9NQX4 1742 aa26.48■■□□□ 1.83
PPP1R3F-202ENST00000376188 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.47■■□□□ 1.83
PPP1R3F-202ENST00000376188 KIF15Q9NS87 1388 aa26.47■■□□□ 1.83
PPP1R3F-202ENST00000376188 HNRNPMP52272 730 aaKnown RBP eCLIP26.45■■□□□ 1.83
PPP1R3F-202ENST00000376188 PKD2Q13563 968 aa26.45■■□□□ 1.82
PPP1R3F-202ENST00000376188 MAST1Q9Y2H9 1570 aa26.44■■□□□ 1.82
PPP1R3F-202ENST00000376188 ARHGAP5Q13017 1502 aa26.44■■□□□ 1.82
PPP1R3F-202ENST00000376188 POLR1AO95602 1720 aaPredicted RBP26.43■■□□□ 1.82
PPP1R3F-202ENST00000376188 NUP155O75694 1391 aa26.43■■□□□ 1.82
PPP1R3F-202ENST00000376188 WASHC2AQ641Q2 1341 aa26.42■■□□□ 1.82
PPP1R3F-202ENST00000376188 NBPF8Q3BBV2 869 aa26.42■■□□□ 1.82
PPP1R3F-202ENST00000376188 PELP1Q8IZL8 1130 aaKnown RBP26.42■■□□□ 1.82
PPP1R3F-202ENST00000376188 UHRF1BP1LA0JNW5 1464 aa26.41■■□□□ 1.82
PPP1R3F-202ENST00000376188 SYCP2Q9BX26 1530 aa26.41■■□□□ 1.82
PPP1R3F-202ENST00000376188 PLEKHH2Q8IVE3 1493 aa26.41■■□□□ 1.82
PPP1R3F-202ENST00000376188 ZCCHC11Q5TAX3 1644 aaKnown RBP26.4■■□□□ 1.82
PPP1R3F-202ENST00000376188 SPATA31E1Q6ZUB1 1445 aa26.35■■□□□ 1.81
PPP1R3F-202ENST00000376188 PLXNC1O60486 1568 aa26.34■■□□□ 1.81
PPP1R3F-202ENST00000376188 CNTLNQ9NXG0 1405 aa26.34■■□□□ 1.81
PPP1R3F-202ENST00000376188 ARHGEF12Q9NZN5 1544 aa26.33■■□□□ 1.8
PPP1R3F-202ENST00000376188 CCDC7Q96M83 1385 aa26.32■■□□□ 1.8
PPP1R3F-202ENST00000376188 UNC13BO14795 1591 aa26.31■■□□□ 1.8
PPP1R3F-202ENST00000376188 FAM135AQ9P2D6 1515 aa26.3■■□□□ 1.8
PPP1R3F-202ENST00000376188 UHRF1BP1Q6BDS2 1440 aa26.28■■□□□ 1.8
PPP1R3F-202ENST00000376188 PLCH2O75038 1416 aa26.27■■□□□ 1.8
PPP1R3F-202ENST00000376188 C11orf95C9JLR9 678 aaPredicted RBP26.23■■□□□ 1.79
PPP1R3F-202ENST00000376188 RALGAPBQ86X10 1494 aa26.22■■□□□ 1.79
PPP1R3F-202ENST00000376188 DUOX2Q9NRD8 1548 aa26.22■■□□□ 1.79
PPP1R3F-202ENST00000376188 KDM5CP41229 1560 aa26.21■■□□□ 1.79
PPP1R3F-202ENST00000376188 ABCC1P33527 1531 aa26.21■■□□□ 1.79
PPP1R3F-202ENST00000376188 IQGAP3Q86VI3 1631 aa26.21■■□□□ 1.79
PPP1R3F-202ENST00000376188 ARAP3Q8WWN8 1544 aa26.2■■□□□ 1.79
PPP1R3F-202ENST00000376188 SUPT16HQ9Y5B9 1047 aaKnown RBP26.19■■□□□ 1.78
PPP1R3F-202ENST00000376188 USP47Q96K76 1375 aa26.19■■□□□ 1.78
PPP1R3F-202ENST00000376188 EFCAB2Q5VUJ9 269 aa26.19■■□□□ 1.78
PPP1R3F-202ENST00000376188 KIF7Q2M1P5 1343 aa26.19■■□□□ 1.78
PPP1R3F-202ENST00000376188 ERBINQ96RT1 1412 aa26.17■■□□□ 1.78
PPP1R3F-202ENST00000376188 ZNF326Q5BKZ1 582 aaKnown RBP26.16■■□□□ 1.78
PPP1R3F-202ENST00000376188 MAGI2Q86UL8 1455 aa26.15■■□□□ 1.78
PPP1R3F-202ENST00000376188 BCORL1Q5H9F3 1711 aa26.13■■□□□ 1.77
PPP1R3F-202ENST00000376188 CCDC144AA2RUR9 1427 aa26.12■■□□□ 1.77
PPP1R3F-202ENST00000376188 ARID4BQ4LE39 1312 aaPredicted RBP26.12■■□□□ 1.77
PPP1R3F-202ENST00000376188 PRKRIP1Q9H875 184 aaPredicted RBP26.09■■□□□ 1.77
PPP1R3F-202ENST00000376188 WDR7Q9Y4E6 1490 aa26.09■■□□□ 1.77
PPP1R3F-202ENST00000376188 TRAPPC8Q9Y2L5 1435 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms