RNA–Protein interactions for RNA: ENST00000375238.8

NECAB3-202, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECAB3, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-202ENST00000375238 PREX2Q70Z35 1606 aa28.51■■■□□ 2.16
NECAB3-202ENST00000375238 KCNH8Q96L42 1107 aa28.51■■■□□ 2.16
NECAB3-202ENST00000375238 DIEXFQ68CQ4 756 aaKnown RBP28.51■■■□□ 2.15
NECAB3-202ENST00000375238 CHIC2Q9UKJ5 165 aa28.5■■■□□ 2.15
NECAB3-202ENST00000375238 CDC42BPBQ9Y5S2 1711 aa28.49■■■□□ 2.15
NECAB3-202ENST00000375238 ABCC5O15440 1437 aa28.48■■■□□ 2.15
NECAB3-202ENST00000375238 ZNF316A6NFI3 1004 aaPredicted RBP28.48■■■□□ 2.15
NECAB3-202ENST00000375238 CLSPNQ9HAW4 1339 aa28.48■■■□□ 2.15
NECAB3-202ENST00000375238 MYO5CQ9NQX4 1742 aa28.47■■■□□ 2.15
NECAB3-202ENST00000375238 NAIPQ13075 1403 aa28.46■■■□□ 2.15
NECAB3-202ENST00000375238 GCC2Q8IWJ2 1684 aa28.45■■■□□ 2.14
NECAB3-202ENST00000375238 WDR7Q9Y4E6 1490 aa28.44■■■□□ 2.14
NECAB3-202ENST00000375238 AKNAQ7Z591 1439 aa28.43■■■□□ 2.14
NECAB3-202ENST00000375238 RRP7BPQ9NSQ0 103 aa28.43■■■□□ 2.14
NECAB3-202ENST00000375238 CROCC2H7BZ55 1655 aa28.41■■■□□ 2.14
NECAB3-202ENST00000375238 ARHGAP5Q13017 1502 aa28.41■■■□□ 2.14
NECAB3-202ENST00000375238 NPM1P06748 294 aaKnown RBP eCLIP28.4■■■□□ 2.14
NECAB3-202ENST00000375238 SAMD9LQ8IVG5 1584 aa28.39■■■□□ 2.13
NECAB3-202ENST00000375238 RIMBP3CA6NJZ7 1639 aa28.37■■■□□ 2.13
NECAB3-202ENST00000375238 RIMBP3BA6NNM3 1639 aa28.37■■■□□ 2.13
NECAB3-202ENST00000375238 ROCK1Q13464 1354 aa28.37■■■□□ 2.13
NECAB3-202ENST00000375238 RIMBP3Q9UFD9 1639 aa28.37■■■□□ 2.13
NECAB3-202ENST00000375238 ASXL2Q76L83 1435 aa28.37■■■□□ 2.13
NECAB3-202ENST00000375238 ADGBQ8N7X0 1667 aa28.36■■■□□ 2.13
NECAB3-202ENST00000375238 PLCH2O75038 1416 aa28.32■■■□□ 2.12
NECAB3-202ENST00000375238 ARHGEF5Q12774 1597 aa28.32■■■□□ 2.12
NECAB3-202ENST00000375238 HNRNPMP52272 730 aaKnown RBP eCLIP28.3■■■□□ 2.125e-11■■■□□ 16.7
NECAB3-202ENST00000375238 KDM6BO15054 1643 aa28.29■■■□□ 2.12
NECAB3-202ENST00000375238 SHANK2Q9UPX8 1470 aa28.28■■■□□ 2.12
NECAB3-202ENST00000375238 ABCA9Q8IUA7 1624 aa28.28■■■□□ 2.12
NECAB3-202ENST00000375238 MBD5Q9P267 1494 aa28.28■■■□□ 2.12
NECAB3-202ENST00000375238 MAPKBP1O60336 1514 aa28.27■■■□□ 2.12
NECAB3-202ENST00000375238 ADGRL2O95490 1459 aa28.27■■■□□ 2.12
NECAB3-202ENST00000375238 SYCP2Q9BX26 1530 aa28.27■■■□□ 2.12
NECAB3-202ENST00000375238 CYB5RLQ6IPT4 315 aa28.27■■■□□ 2.12
NECAB3-202ENST00000375238 PLEKHH2Q8IVE3 1493 aa28.25■■■□□ 2.11
NECAB3-202ENST00000375238 CCDC141Q6ZP82 1450 aa28.25■■■□□ 2.11
NECAB3-202ENST00000375238 NCOA1Q15788 1441 aa28.24■■■□□ 2.11
NECAB3-202ENST00000375238 C9orf84Q5VXU9 1444 aa28.24■■■□□ 2.11
NECAB3-202ENST00000375238 EFCAB2Q5VUJ9 269 aa28.24■■■□□ 2.11
NECAB3-202ENST00000375238 ARAP3Q8WWN8 1544 aa28.24■■■□□ 2.11
NECAB3-202ENST00000375238 ANKRD30AQ9BXX3 1397 aa28.23■■■□□ 2.11
NECAB3-202ENST00000375238 TSPY4P0CV99 314 aa28.23■■■□□ 2.11
NECAB3-202ENST00000375238 TSPY10P0CW01 314 aa28.23■■■□□ 2.11
NECAB3-202ENST00000375238 RSPH4AQ5TD94 716 aa28.21■■■□□ 2.11
NECAB3-202ENST00000375238 KIAA1107Q9UPP5 1409 aa28.21■■■□□ 2.11
NECAB3-202ENST00000375238 ABCC1P33527 1531 aa28.16■■■□□ 2.1
NECAB3-202ENST00000375238 TRIM52Q96A61 297 aa28.16■■■□□ 2.1
NECAB3-202ENST00000375238 ARHGEF12Q9NZN5 1544 aa28.15■■■□□ 2.1
NECAB3-202ENST00000375238 FANCAO15360 1455 aa28.12■■■□□ 2.09
NECAB3-202ENST00000375238 ACIN1Q9UKV3 1341 aaKnown RBP28.12■■■□□ 2.09
NECAB3-202ENST00000375238 MAST1Q9Y2H9 1570 aa28.12■■■□□ 2.09
NECAB3-202ENST00000375238 ANKRD50Q9ULJ7 1429 aa28.08■■■□□ 2.09
NECAB3-202ENST00000375238 KIF15Q9NS87 1388 aa28.08■■■□□ 2.09
NECAB3-202ENST00000375238 CD109Q6YHK3 1445 aa28.04■■■□□ 2.08
NECAB3-202ENST00000375238 TRAPPC8Q9Y2L5 1435 aa28.04■■■□□ 2.08
NECAB3-202ENST00000375238 SCAF1Q9H7N4 1312 aaKnown RBP28.04■■■□□ 2.08
NECAB3-202ENST00000375238 SIN3AQ96ST3 1273 aa28.02■■■□□ 2.08
NECAB3-202ENST00000375238 PLXNC1O60486 1568 aa28.02■■■□□ 2.08
NECAB3-202ENST00000375238 MPHOSPH9Q99550 1183 aa28.02■■■□□ 2.08
NECAB3-202ENST00000375238 ADGRL1O94910 1474 aa28.01■■■□□ 2.08
NECAB3-202ENST00000375238 NEUROD1Q13562 356 aa28■■■□□ 2.07
NECAB3-202ENST00000375238 DENND4BO75064 1496 aaPredicted RBP28■■■□□ 2.07
NECAB3-202ENST00000375238 CFAP74Q9C0B2 1584 aa27.99■■■□□ 2.07
NECAB3-202ENST00000375238 SCAPERQ9BY12 1400 aa27.97■■■□□ 2.07
NECAB3-202ENST00000375238 MIER1Q8N108 512 aa27.96■■■□□ 2.07
NECAB3-202ENST00000375238 AFAP1Q8N556 730 aa27.95■■■□□ 2.06
NECAB3-202ENST00000375238 SPAG9O60271 1321 aaKnown RBP27.93■■■□□ 2.06
NECAB3-202ENST00000375238 PZPP20742 1482 aa27.93■■■□□ 2.06
NECAB3-202ENST00000375238 SLC4A1APQ9BWU0 796 aaKnown RBP27.93■■■□□ 2.06
NECAB3-202ENST00000375238 ZFYVE16Q7Z3T8 1539 aa27.91■■■□□ 2.06
NECAB3-202ENST00000375238 DUOX2Q9NRD8 1548 aa27.91■■■□□ 2.06
NECAB3-202ENST00000375238 GLI2P10070 1586 aa27.91■■■□□ 2.06
NECAB3-202ENST00000375238 MAP3K4Q9Y6R4 1608 aa27.91■■■□□ 2.06
NECAB3-202ENST00000375238 RTEL1-TNFRSF6BF6WH68 1400 aa27.9■■■□□ 2.06
NECAB3-202ENST00000375238 CENPBP07199 599 aaPredicted RBP27.88■■■□□ 2.05
NECAB3-202ENST00000375238 INO80Q9ULG1 1556 aaPredicted RBP27.88■■■□□ 2.05
NECAB3-202ENST00000375238 NUP155O75694 1391 aa27.87■■■□□ 2.05
NECAB3-202ENST00000375238 DIP2BQ9P265 1576 aa27.87■■■□□ 2.05
NECAB3-202ENST00000375238 ATP7AQ04656 1500 aa27.87■■■□□ 2.05
NECAB3-202ENST00000375238 FOXD1Q16676 465 aa27.86■■■□□ 2.05
NECAB3-202ENST00000375238 KDM5DQ9BY66 1539 aa27.86■■■□□ 2.05
NECAB3-202ENST00000375238 TIMELESSQ9UNS1 1208 aa27.86■■■□□ 2.05
NECAB3-202ENST00000375238 NEO1Q92859 1461 aa27.84■■■□□ 2.05
NECAB3-202ENST00000375238 ERBINQ96RT1 1412 aa27.84■■■□□ 2.05
NECAB3-202ENST00000375238 ZNF518AQ6AHZ1 1483 aa27.83■■■□□ 2.05
NECAB3-202ENST00000375238 FAM69CQ0P6D2 419 aa27.82■■■□□ 2.04
NECAB3-202ENST00000375238 MYT1LQ9UL68 1186 aa27.82■■■□□ 2.04
NECAB3-202ENST00000375238 UNC13BO14795 1591 aa27.82■■■□□ 2.04
NECAB3-202ENST00000375238 TONSLQ96HA7 1378 aa27.82■■■□□ 2.04
NECAB3-202ENST00000375238 POGZQ7Z3K3 1410 aa27.79■■■□□ 2.04
NECAB3-202ENST00000375238 ANKRD30BQ9BXX2 1392 aa27.79■■■□□ 2.04
NECAB3-202ENST00000375238 PKD2Q13563 968 aa27.78■■■□□ 2.04
NECAB3-202ENST00000375238 KIDINS220Q9ULH0 1771 aa27.76■■■□□ 2.03
NECAB3-202ENST00000375238 FAM135AQ9P2D6 1515 aa27.75■■■□□ 2.03
NECAB3-202ENST00000375238 KDM5CP41229 1560 aa27.75■■■□□ 2.03
NECAB3-202ENST00000375238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.73■■■□□ 2.032e-7■■□□□ 11.7
NECAB3-202ENST00000375238 TSPOAP1O95153 1857 aa27.73■■■□□ 2.03
NECAB3-202ENST00000375238 MAGI2Q86UL8 1455 aa27.7■■■□□ 2.03
NECAB3-202ENST00000375238 IQGAP3Q86VI3 1631 aa27.7■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms