RNA–Protein interactions for RNA: ENST00000374884.2

SPIN4-201, Transcript of spindlin family member 4, humanhuman

APPRIS P1 BASIC

Gene SPIN4, Length 4,117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4-201ENST00000374884 FHOD3Q2V2M9 1422 aa12.35□□□□□ -0.43
SPIN4-201ENST00000374884 KTN1Q86UP2 1357 aaKnown RBP12.35□□□□□ -0.43
SPIN4-201ENST00000374884 CDCA8Q53HL2 280 aa12.34□□□□□ -0.43
SPIN4-201ENST00000374884 WDR97A6NE52 1622 aa12.34□□□□□ -0.43
SPIN4-201ENST00000374884 GOLGA6L22H0YM25 854 aa12.34□□□□□ -0.43
SPIN4-201ENST00000374884 NLRP13Q86W25 1043 aa12.34□□□□□ -0.43
SPIN4-201ENST00000374884 CHMP7Q8WUX9 453 aaPredicted RBP12.33□□□□□ -0.44
SPIN4-201ENST00000374884 UACAQ9BZF9 1416 aa12.33□□□□□ -0.44
SPIN4-201ENST00000374884 CNTLNQ9NXG0 1405 aa12.33□□□□□ -0.44
SPIN4-201ENST00000374884 CCDC7Q96M83 1385 aa12.33□□□□□ -0.44
SPIN4-201ENST00000374884 PKD2Q13563 968 aa12.33□□□□□ -0.44
SPIN4-201ENST00000374884 RSPH6AQ9H0K4 717 aa12.32□□□□□ -0.44
SPIN4-201ENST00000374884 ROCK2O75116 1388 aaKnown RBP12.32□□□□□ -0.44
SPIN4-201ENST00000374884 PNNQ9H307 717 aaKnown RBP12.32□□□□□ -0.44
SPIN4-201ENST00000374884 SLC4A3P48751 1232 aa12.32□□□□□ -0.44
SPIN4-201ENST00000374884 IL27Q8NEV9 243 aa12.32□□□□□ -0.44
SPIN4-201ENST00000374884 FRAT1Q92837 279 aaPredicted RBP12.32□□□□□ -0.44
SPIN4-201ENST00000374884 LRRC9Q6ZRR7 1453 aa12.31□□□□□ -0.44
SPIN4-201ENST00000374884 SLKQ9H2G2 1235 aaPredicted RBP12.31□□□□□ -0.44
SPIN4-201ENST00000374884 PRKCSHP14314 528 aaPredicted RBP12.31□□□□□ -0.44
SPIN4-201ENST00000374884 TMF1P82094 1093 aa12.3□□□□□ -0.44
SPIN4-201ENST00000374884 PLEKHD1A6NEE1 506 aa12.3□□□□□ -0.44
SPIN4-201ENST00000374884 FANCD2Q9BXW9 1451 aa12.3□□□□□ -0.44
SPIN4-201ENST00000374884 SYNJ1O43426 1573 aa12.29□□□□□ -0.44
SPIN4-201ENST00000374884 ERICH3Q5RHP9 1530 aa12.29□□□□□ -0.44
SPIN4-201ENST00000374884 PDS5BQ9NTI5 1447 aa12.29□□□□□ -0.44
SPIN4-201ENST00000374884 MYBBP1AQ9BQG0 1328 aaKnown RBP12.29□□□□□ -0.44
SPIN4-201ENST00000374884 KIF7Q2M1P5 1343 aa12.29□□□□□ -0.44
SPIN4-201ENST00000374884 KIF15Q9NS87 1388 aa12.28□□□□□ -0.44
SPIN4-201ENST00000374884 NEUROD2Q15784 382 aa12.28□□□□□ -0.44
SPIN4-201ENST00000374884 FAM161AQ3B820 660 aa12.28□□□□□ -0.44
SPIN4-201ENST00000374884 PLIN1O60240 522 aa12.27□□□□□ -0.44
SPIN4-201ENST00000374884 CCDC184Q52MB2 194 aa12.27□□□□□ -0.44
SPIN4-201ENST00000374884 FTSJ3Q8IY81 847 aaKnown RBP12.27□□□□□ -0.45
SPIN4-201ENST00000374884 CENPQQ7L2Z9 268 aaPredicted RBP12.27□□□□□ -0.45
SPIN4-201ENST00000374884 PRXQ9BXM0 1461 aa12.26□□□□□ -0.45
SPIN4-201ENST00000374884 FGD6Q6ZV73 1430 aa12.26□□□□□ -0.45
SPIN4-201ENST00000374884 NFKBIBQ15653 356 aa12.26□□□□□ -0.45
SPIN4-201ENST00000374884 IGF1RP08069 1367 aa12.26□□□□□ -0.45
SPIN4-201ENST00000374884 CHGAP10645 457 aaKnown RBP12.26□□□□□ -0.45
SPIN4-201ENST00000374884 GZF1Q9H116 711 aaPredicted RBP12.26□□□□□ -0.45
SPIN4-201ENST00000374884 SPRYD3Q8NCJ5 442 aa12.25□□□□□ -0.45
SPIN4-201ENST00000374884 GOLGA6L3A6NEY3 463 aa12.25□□□□□ -0.45
SPIN4-201ENST00000374884 NCLP19338 710 aaKnown RBP12.25□□□□□ -0.45
SPIN4-201ENST00000374884 CRBNQ96SW2 442 aa12.25□□□□□ -0.45
SPIN4-201ENST00000374884 ST20-MTHFSA0A0A6YYL1 179 aa12.24□□□□□ -0.45
SPIN4-201ENST00000374884 GOLGA2Q08379 1002 aa12.24□□□□□ -0.45
SPIN4-201ENST00000374884 AKNAQ7Z591 1439 aa12.24□□□□□ -0.45
SPIN4-201ENST00000374884 HSCBQ8IWL3 235 aa12.24□□□□□ -0.45
SPIN4-201ENST00000374884 USP47Q96K76 1375 aa12.23□□□□□ -0.45
SPIN4-201ENST00000374884 RAD54L2Q9Y4B4 1467 aa12.23□□□□□ -0.45
SPIN4-201ENST00000374884 HSP90AB1P08238 724 aaKnown RBP12.22□□□□□ -0.45
SPIN4-201ENST00000374884 CFAP53Q96M91 514 aa12.22□□□□□ -0.45
SPIN4-201ENST00000374884 MYH16Q9H6N6 1097 aa12.22□□□□□ -0.45
SPIN4-201ENST00000374884 BRPF3Q9ULD4 1205 aa12.22□□□□□ -0.45
SPIN4-201ENST00000374884 CFTRP13569 1480 aa12.21□□□□□ -0.45
SPIN4-201ENST00000374884 BACH2Q9BYV9 841 aa12.21□□□□□ -0.45
SPIN4-201ENST00000374884 NUP155O75694 1391 aa12.2□□□□□ -0.46
SPIN4-201ENST00000374884 SMG6Q86US8 1419 aaKnown RBP12.2□□□□□ -0.46
SPIN4-201ENST00000374884 HMGXB3Q12766 1538 aa12.2□□□□□ -0.46
SPIN4-201ENST00000374884 HSP90AA2PQ14568 343 aaPredicted RBP12.19□□□□□ -0.46
SPIN4-201ENST00000374884 ARID4BQ4LE39 1312 aaPredicted RBP12.19□□□□□ -0.46
SPIN4-201ENST00000374884 MSNP26038 577 aaKnown RBP12.18□□□□□ -0.46
SPIN4-201ENST00000374884 TNNT2P45379 298 aaPredicted RBP12.18□□□□□ -0.46
SPIN4-201ENST00000374884 PTMAP06454 111 aaKnown RBP12.18□□□□□ -0.46
SPIN4-201ENST00000374884 FGD5Q6ZNL6 1462 aa12.18□□□□□ -0.46
SPIN4-201ENST00000374884 MYOM3Q5VTT5 1437 aa12.17□□□□□ -0.46
SPIN4-201ENST00000374884 DNTTIP2Q5QJE6 756 aaKnown RBP12.17□□□□□ -0.46
SPIN4-201ENST00000374884 RWDD1Q9H446 243 aaPredicted RBP12.17□□□□□ -0.46
SPIN4-201ENST00000374884 SLC24A1O60721 1099 aa12.16□□□□□ -0.46
SPIN4-201ENST00000374884 PMFBP1Q8TBY8 1022 aa12.16□□□□□ -0.46
SPIN4-201ENST00000374884 ANKRD30AQ9BXX3 1397 aa12.16□□□□□ -0.46
SPIN4-201ENST00000374884 PNISRQ8TF01 805 aaKnown RBP12.16□□□□□ -0.46
SPIN4-201ENST00000374884 GBP4Q96PP9 640 aa12.16□□□□□ -0.46
SPIN4-201ENST00000374884 TIAM1Q13009 1591 aa12.15□□□□□ -0.46
SPIN4-201ENST00000374884 HFM1A2PYH4 1435 aa12.15□□□□□ -0.46
SPIN4-201ENST00000374884 VSIG10Q8N0Z9 540 aa12.15□□□□□ -0.46
SPIN4-201ENST00000374884 MAPK8IP3Q9UPT6 1336 aa12.15□□□□□ -0.46
SPIN4-201ENST00000374884 PEG3Q9GZU2 1588 aa12.15□□□□□ -0.47
SPIN4-201ENST00000374884 BRD4O60885 1362 aaPredicted RBP12.14□□□□□ -0.47
SPIN4-201ENST00000374884 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.14□□□□□ -0.47
SPIN4-201ENST00000374884 CASKIN1Q8WXD9 1431 aa12.13□□□□□ -0.47
SPIN4-201ENST00000374884 NBPF8Q3BBV2 869 aa12.13□□□□□ -0.47
SPIN4-201ENST00000374884 FRAT2O75474 233 aaPredicted RBP12.13□□□□□ -0.47
SPIN4-201ENST00000374884 PANK3Q9H999 370 aa12.13□□□□□ -0.47
SPIN4-201ENST00000374884 PTMSP20962 102 aa12.12□□□□□ -0.47
SPIN4-201ENST00000374884 CDCA7LQ96GN5 454 aa12.12□□□□□ -0.47
SPIN4-201ENST00000374884 TOP2BQ02880 1626 aa12.12□□□□□ -0.47
SPIN4-201ENST00000374884 MFAP1P55081 439 aaKnown RBP12.11□□□□□ -0.47
SPIN4-201ENST00000374884 CENPJQ9HC77 1338 aaPredicted RBP12.11□□□□□ -0.47
SPIN4-201ENST00000374884 CUX1P39880 1505 aa12.11□□□□□ -0.47
SPIN4-201ENST00000374884 CCDC146Q8IYE0 955 aa12.11□□□□□ -0.47
SPIN4-201ENST00000374884 CGNL1Q0VF96 1302 aa12.11□□□□□ -0.47
SPIN4-201ENST00000374884 MAPKBP1O60336 1514 aa12.1□□□□□ -0.47
SPIN4-201ENST00000374884 CHMP4BQ9H444 224 aaKnown RBP12.1□□□□□ -0.47
SPIN4-201ENST00000374884 C11orf95C9JLR9 678 aaPredicted RBP12.1□□□□□ -0.47
SPIN4-201ENST00000374884 FAM43AQ8N2R8 423 aa12.1□□□□□ -0.47
SPIN4-201ENST00000374884 AQRO60306 1485 aaKnown RBP eCLIP12.1□□□□□ -0.47
SPIN4-201ENST00000374884 NCOA2Q15596 1464 aa12.09□□□□□ -0.47
SPIN4-201ENST00000374884 CASC1Q6TDU7 716 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms