RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 ABCC5O15440 1437 aa21.87■■□□□ 1.09
TMEM50A-201ENST00000374358 RAPGEF6Q8TEU7 1601 aa21.87■■□□□ 1.09
TMEM50A-201ENST00000374358 PRG4Q92954 1404 aaPredicted RBP21.86■■□□□ 1.09
TMEM50A-201ENST00000374358 PLB1Q6P1J6 1458 aa21.84■■□□□ 1.09
TMEM50A-201ENST00000374358 DNMT1P26358 1616 aaKnown RBP21.83■■□□□ 1.09
TMEM50A-201ENST00000374358 ERCC6Q03468 1493 aa21.82■■□□□ 1.08
TMEM50A-201ENST00000374358 CHMP7Q8WUX9 453 aaPredicted RBP21.82■■□□□ 1.08
TMEM50A-201ENST00000374358 ZNF777Q9ULD5 760 aaPredicted RBP21.81■■□□□ 1.08
TMEM50A-201ENST00000374358 TSHZ2Q9NRE2 1034 aa21.81■■□□□ 1.08
TMEM50A-201ENST00000374358 CEP170Q5SW79 1584 aa21.8■■□□□ 1.08
TMEM50A-201ENST00000374358 C11orf95C9JLR9 678 aaPredicted RBP21.8■■□□□ 1.08
TMEM50A-201ENST00000374358 EIF4G2P78344 907 aaKnown RBP eCLIP21.8■■□□□ 1.086e-6■■■■□ 25.1
TMEM50A-201ENST00000374358 NBPF8Q3BBV2 869 aa21.79■■□□□ 1.08
TMEM50A-201ENST00000374358 SLC4A1APQ9BWU0 796 aaKnown RBP21.79■■□□□ 1.08
TMEM50A-201ENST00000374358 ANKRD30BQ9BXX2 1392 aa21.78■■□□□ 1.08
TMEM50A-201ENST00000374358 CDK11AQ9UQ88 783 aaPredicted RBP21.77■■□□□ 1.08
TMEM50A-201ENST00000374358 ROCK1Q13464 1354 aa21.77■■□□□ 1.08
TMEM50A-201ENST00000374358 KIF14Q15058 1648 aa21.77■■□□□ 1.08
TMEM50A-201ENST00000374358 CFDP1Q9UEE9 299 aaPredicted RBP21.76■■□□□ 1.07
TMEM50A-201ENST00000374358 CAMSAP2Q08AD1 1489 aa21.75■■□□□ 1.07
TMEM50A-201ENST00000374358 TROQ12816 1431 aaPredicted RBP21.74■■□□□ 1.07
TMEM50A-201ENST00000374358 RPRD2Q5VT52 1461 aaKnown RBP21.74■■□□□ 1.07
TMEM50A-201ENST00000374358 HNRNPUQ00839 825 aaKnown RBP eCLIP21.73■■□□□ 1.07
TMEM50A-201ENST00000374358 CCDC184Q52MB2 194 aa21.73■■□□□ 1.07
TMEM50A-201ENST00000374358 TEX14Q8IWB6 1497 aa21.73■■□□□ 1.07
TMEM50A-201ENST00000374358 SYNJ2O15056 1496 aa21.71■■□□□ 1.07
TMEM50A-201ENST00000374358 MAGI1Q96QZ7 1491 aaPredicted RBP21.71■■□□□ 1.07
TMEM50A-201ENST00000374358 GPATCH8Q9UKJ3 1502 aaKnown RBP21.71■■□□□ 1.07
TMEM50A-201ENST00000374358 NEFLP07196 543 aa21.7■■□□□ 1.06
TMEM50A-201ENST00000374358 JPH4Q96JJ6 628 aa21.69■■□□□ 1.06
TMEM50A-201ENST00000374358 PZPP20742 1482 aa21.68■■□□□ 1.06
TMEM50A-201ENST00000374358 CNTLNQ9NXG0 1405 aa21.67■■□□□ 1.06
TMEM50A-201ENST00000374358 NCOA1Q15788 1441 aa21.67■■□□□ 1.06
TMEM50A-201ENST00000374358 CCDC7Q96M83 1385 aa21.66■■□□□ 1.06
TMEM50A-201ENST00000374358 ZNF326Q5BKZ1 582 aaKnown RBP21.65■■□□□ 1.06
TMEM50A-201ENST00000374358 ITSN2Q9NZM3 1697 aa21.64■■□□□ 1.05
TMEM50A-201ENST00000374358 IRX6P78412 446 aaPredicted RBP21.63■■□□□ 1.05
TMEM50A-201ENST00000374358 CNGB1Q14028 1251 aaPredicted RBP21.63■■□□□ 1.05
TMEM50A-201ENST00000374358 CARMIL2Q6F5E8 1435 aa21.61■■□□□ 1.05
TMEM50A-201ENST00000374358 KIF7Q2M1P5 1343 aa21.61■■□□□ 1.05
TMEM50A-201ENST00000374358 NUP160Q12769 1436 aa21.6■■□□□ 1.05
TMEM50A-201ENST00000374358 ADGBQ8N7X0 1667 aa21.6■■□□□ 1.05
TMEM50A-201ENST00000374358 PKD2Q13563 968 aa21.6■■□□□ 1.05
TMEM50A-201ENST00000374358 PRKRIP1Q9H875 184 aaPredicted RBP21.59■■□□□ 1.05
TMEM50A-201ENST00000374358 ADCY10Q96PN6 1610 aa21.59■■□□□ 1.05
TMEM50A-201ENST00000374358 CROCC2H7BZ55 1655 aa21.58■■□□□ 1.05
TMEM50A-201ENST00000374358 FAM9BQ8IZU0 186 aa21.58■■□□□ 1.05
TMEM50A-201ENST00000374358 SPATA31E1Q6ZUB1 1445 aa21.58■■□□□ 1.04
TMEM50A-201ENST00000374358 POLR3GLQ9BT43 218 aa21.56■■□□□ 1.04
TMEM50A-201ENST00000374358 CDC42BPAQ5VT25 1732 aa21.56■■□□□ 1.04
TMEM50A-201ENST00000374358 PLEKHD1A6NEE1 506 aa21.55■■□□□ 1.04
TMEM50A-201ENST00000374358 KIAA1107Q9UPP5 1409 aa21.54■■□□□ 1.04
TMEM50A-201ENST00000374358 ANKRD30AQ9BXX3 1397 aa21.54■■□□□ 1.04
TMEM50A-201ENST00000374358 ANKRD50Q9ULJ7 1429 aa21.54■■□□□ 1.04
TMEM50A-201ENST00000374358 ATP10BO94823 1461 aa21.54■■□□□ 1.04
TMEM50A-201ENST00000374358 ADGRL2O95490 1459 aa21.54■■□□□ 1.04
TMEM50A-201ENST00000374358 MRS2Q9HD23 443 aa21.54■■□□□ 1.04
TMEM50A-201ENST00000374358 ABCA8O94911 1581 aa21.52■■□□□ 1.04
TMEM50A-201ENST00000374358 ABCC10Q5T3U5 1492 aa21.5■■□□□ 1.03
TMEM50A-201ENST00000374358 MBD5Q9P267 1494 aa21.5■■□□□ 1.03
TMEM50A-201ENST00000374358 HNRNPMP52272 730 aaKnown RBP eCLIP21.5■■□□□ 1.03
TMEM50A-201ENST00000374358 C9orf84Q5VXU9 1444 aa21.5■■□□□ 1.03
TMEM50A-201ENST00000374358 NUP155O75694 1391 aa21.49■■□□□ 1.03
TMEM50A-201ENST00000374358 USP47Q96K76 1375 aa21.48■■□□□ 1.03
TMEM50A-201ENST00000374358 BCORL1Q5H9F3 1711 aa21.48■■□□□ 1.03
TMEM50A-201ENST00000374358 POLR1AO95602 1720 aaPredicted RBP21.46■■□□□ 1.03
TMEM50A-201ENST00000374358 SENP3-EIF4A1A0A087X0R7 540 aa21.45■■□□□ 1.02
TMEM50A-201ENST00000374358 KDM2AQ9Y2K7 1162 aa21.43■■□□□ 1.02
TMEM50A-201ENST00000374358 TSPY4P0CV99 314 aa21.42■■□□□ 1.02
TMEM50A-201ENST00000374358 TSPY10P0CW01 314 aa21.42■■□□□ 1.02
TMEM50A-201ENST00000374358 KIF15Q9NS87 1388 aa21.41■■□□□ 1.02
TMEM50A-201ENST00000374358 PTPRGP23470 1445 aa21.39■■□□□ 1.01
TMEM50A-201ENST00000374358 DHX29Q7Z478 1369 aaKnown RBP21.39■■□□□ 1.01
TMEM50A-201ENST00000374358 RBM19Q9Y4C8 960 aaKnown RBP21.39■■□□□ 1.01
TMEM50A-201ENST00000374358 KDM5CP41229 1560 aa21.39■■□□□ 1.01
TMEM50A-201ENST00000374358 SHANK2Q9UPX8 1470 aa21.38■■□□□ 1.01
TMEM50A-201ENST00000374358 CARD11Q9BXL7 1154 aa21.36■■□□□ 1.01
TMEM50A-201ENST00000374358 SAMD9LQ8IVG5 1584 aa21.35■■□□□ 1.01
TMEM50A-201ENST00000374358 DCAF11Q8TEB1 546 aa21.34■■□□□ 1.01
TMEM50A-201ENST00000374358 ZBED9Q6R2W3 1325 aa21.34■■□□□ 1.01
TMEM50A-201ENST00000374358 CDC42BPBQ9Y5S2 1711 aa21.34■■□□□ 1.01
TMEM50A-201ENST00000374358 MYT1Q01538 1121 aa21.33■■□□□ 1.01
TMEM50A-201ENST00000374358 RALGAPBQ86X10 1494 aa21.31■■□□□ 1
TMEM50A-201ENST00000374358 ST20-MTHFSA0A0A6YYL1 179 aa21.31■■□□□ 1
TMEM50A-201ENST00000374358 UHRF1BP1Q6BDS2 1440 aa21.29■■□□□ 1
TMEM50A-201ENST00000374358 CCDC141Q6ZP82 1450 aa21.29■■□□□ 1
TMEM50A-201ENST00000374358 KDM5DQ9BY66 1539 aa21.29■■□□□ 1
TMEM50A-201ENST00000374358 CHD1O14646 1710 aa21.29■■□□□ 1
TMEM50A-201ENST00000374358 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.28■■□□□ 1
TMEM50A-201ENST00000374358 SYCP2Q9BX26 1530 aa21.28■■□□□ 1
TMEM50A-201ENST00000374358 ARHGEF5Q12774 1597 aa21.28■■□□□ 1
TMEM50A-201ENST00000374358 PREX2Q70Z35 1606 aa21.28■■□□□ 1
TMEM50A-201ENST00000374358 TTC37Q6PGP7 1564 aa21.27■■□□□ 1
TMEM50A-201ENST00000374358 RGL3Q3MIN7 710 aa21.27■■□□□ 1
TMEM50A-201ENST00000374358 ERCC6L2Q5T890 1561 aa21.26■□□□□ 0.99
TMEM50A-201ENST00000374358 FAM135AQ9P2D6 1515 aa21.26■□□□□ 0.99
TMEM50A-201ENST00000374358 ARHGEF12Q9NZN5 1544 aa21.25■□□□□ 0.99
TMEM50A-201ENST00000374358 B4GALNT3Q6L9W6 998 aa21.24■□□□□ 0.99
TMEM50A-201ENST00000374358 ARHGAP5Q13017 1502 aa21.24■□□□□ 0.99
TMEM50A-201ENST00000374358 ANP32EQ9BTT0 268 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms