RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 MYO5CQ9NQX4 1742 aa24.91■■□□□ 1.58
CDKN1A-202ENST00000373711 MLECQ14165 292 aa24.9■■□□□ 1.58
CDKN1A-202ENST00000373711 PLCH2O75038 1416 aa24.89■■□□□ 1.58
CDKN1A-202ENST00000373711 C9orf84Q5VXU9 1444 aa24.89■■□□□ 1.58
CDKN1A-202ENST00000373711 SCAPERQ9BY12 1400 aa24.89■■□□□ 1.58
CDKN1A-202ENST00000373711 ARHGEF12Q9NZN5 1544 aa24.89■■□□□ 1.57
CDKN1A-202ENST00000373711 ATP10AO60312 1499 aa24.88■■□□□ 1.57
CDKN1A-202ENST00000373711 CDK13Q14004 1512 aaKnown RBP24.86■■□□□ 1.57
CDKN1A-202ENST00000373711 SETD1BQ9UPS6 1966 aaKnown RBP24.83■■□□□ 1.57
CDKN1A-202ENST00000373711 DMRT2Q9Y5R5 561 aa24.82■■□□□ 1.56
CDKN1A-202ENST00000373711 EFCAB2Q5VUJ9 269 aa24.81■■□□□ 1.56
CDKN1A-202ENST00000373711 ZNF518AQ6AHZ1 1483 aa24.8■■□□□ 1.56
CDKN1A-202ENST00000373711 CDK11AQ9UQ88 783 aaPredicted RBP24.79■■□□□ 1.56
CDKN1A-202ENST00000373711 KIF14Q15058 1648 aa24.79■■□□□ 1.56
CDKN1A-202ENST00000373711 FMN1Q68DA7 1419 aa24.78■■□□□ 1.56
CDKN1A-202ENST00000373711 UHRF1BP1Q6BDS2 1440 aa24.78■■□□□ 1.56
CDKN1A-202ENST00000373711 STRCQ7RTU9 1775 aa24.75■■□□□ 1.55
CDKN1A-202ENST00000373711 KDM5CP41229 1560 aa24.75■■□□□ 1.55
CDKN1A-202ENST00000373711 ARHGAP5Q13017 1502 aa24.73■■□□□ 1.55
CDKN1A-202ENST00000373711 REREQ9P2R6 1566 aa24.72■■□□□ 1.55
CDKN1A-202ENST00000373711 CLIP1P30622 1438 aa24.71■■□□□ 1.55
CDKN1A-202ENST00000373711 DISP3Q9P2K9 1392 aa24.7■■□□□ 1.55
CDKN1A-202ENST00000373711 ATP1B4Q9UN42 357 aaPredicted RBP24.7■■□□□ 1.54
CDKN1A-202ENST00000373711 MYT1LQ9UL68 1186 aa24.69■■□□□ 1.54
CDKN1A-202ENST00000373711 DIP2CQ9Y2E4 1556 aa24.68■■□□□ 1.54
CDKN1A-202ENST00000373711 CEBPAP49715 358 aaPredicted RBP24.68■■□□□ 1.54
CDKN1A-202ENST00000373711 C3P01024 1663 aa24.67■■□□□ 1.54
CDKN1A-202ENST00000373711 TROQ12816 1431 aaPredicted RBP24.67■■□□□ 1.54
CDKN1A-202ENST00000373711 ESF1Q9H501 851 aaKnown RBP24.65■■□□□ 1.54
CDKN1A-202ENST00000373711 PTPRTO14522 1441 aa24.64■■□□□ 1.54
CDKN1A-202ENST00000373711 ABCA6Q8N139 1617 aa24.63■■□□□ 1.53
CDKN1A-202ENST00000373711 CDC42BPBQ9Y5S2 1711 aa24.62■■□□□ 1.53
CDKN1A-202ENST00000373711 MLH3Q9UHC1 1453 aa24.62■■□□□ 1.53
CDKN1A-202ENST00000373711 AGLP35573 1532 aa24.61■■□□□ 1.53
CDKN1A-202ENST00000373711 SPATA31D1Q6ZQQ2 1576 aa24.61■■□□□ 1.53
CDKN1A-202ENST00000373711 UBTFP17480 764 aaKnown RBP24.6■■□□□ 1.53
CDKN1A-202ENST00000373711 AFAP1Q8N556 730 aa24.6■■□□□ 1.53
CDKN1A-202ENST00000373711 ARHGAP35Q9NRY4 1499 aa24.59■■□□□ 1.53
CDKN1A-202ENST00000373711 SOCS7O14512 581 aa24.59■■□□□ 1.53
CDKN1A-202ENST00000373711 PREX2Q70Z35 1606 aa24.59■■□□□ 1.53
CDKN1A-202ENST00000373711 IQSEC2Q5JU85 1478 aa24.58■■□□□ 1.53
CDKN1A-202ENST00000373711 ITSN2Q9NZM3 1697 aa24.58■■□□□ 1.53
CDKN1A-202ENST00000373711 CNTLNQ9NXG0 1405 aa24.57■■□□□ 1.52
CDKN1A-202ENST00000373711 ABCC1P33527 1531 aa24.56■■□□□ 1.52
CDKN1A-202ENST00000373711 LRRIQ1Q96JM4 1722 aa24.56■■□□□ 1.52
CDKN1A-202ENST00000373711 TRAPPC8Q9Y2L5 1435 aa24.56■■□□□ 1.52
CDKN1A-202ENST00000373711 ILDR2Q71H61 639 aa24.53■■□□□ 1.52
CDKN1A-202ENST00000373711 MROH2AA6NES4 1674 aa24.53■■□□□ 1.52
CDKN1A-202ENST00000373711 CCDC18Q5T9S5 1454 aa24.51■■□□□ 1.51
CDKN1A-202ENST00000373711 KIDINS220Q9ULH0 1771 aa24.5■■□□□ 1.51
CDKN1A-202ENST00000373711 NCOA1Q15788 1441 aa24.5■■□□□ 1.51
CDKN1A-202ENST00000373711 LTBP4Q8N2S1 1624 aa24.5■■□□□ 1.51
CDKN1A-202ENST00000373711 CDC42BPAQ5VT25 1732 aa24.47■■□□□ 1.51
CDKN1A-202ENST00000373711 NPATQ14207 1427 aa24.46■■□□□ 1.51
CDKN1A-202ENST00000373711 EHMT2Q96KQ7 1210 aa24.44■■□□□ 1.5
CDKN1A-202ENST00000373711 CAMSAP1Q5T5Y3 1602 aa24.43■■□□□ 1.5
CDKN1A-202ENST00000373711 SUPT6HQ7KZ85 1726 aaKnown RBP24.42■■□□□ 1.5
CDKN1A-202ENST00000373711 CASKIN1Q8WXD9 1431 aa24.4■■□□□ 1.5
CDKN1A-202ENST00000373711 SAMD9LQ8IVG5 1584 aa24.39■■□□□ 1.5
CDKN1A-202ENST00000373711 ZNF142P52746 1687 aaPredicted RBP24.39■■□□□ 1.49
CDKN1A-202ENST00000373711 MYO3AQ8NEV4 1616 aa24.35■■□□□ 1.49
CDKN1A-202ENST00000373711 CLTCQ00610 1675 aaKnown RBP24.34■■□□□ 1.49
CDKN1A-202ENST00000373711 ZMYM3Q14202 1370 aa24.34■■□□□ 1.49
CDKN1A-202ENST00000373711 SYCP2Q9BX26 1530 aa24.34■■□□□ 1.49
CDKN1A-202ENST00000373711 PLA2R1Q13018 1463 aa24.33■■□□□ 1.49
CDKN1A-202ENST00000373711 SPAG9O60271 1321 aaKnown RBP24.33■■□□□ 1.48
CDKN1A-202ENST00000373711 FYCO1Q9BQS8 1478 aa24.32■■□□□ 1.48
CDKN1A-202ENST00000373711 ATP7AQ04656 1500 aa24.32■■□□□ 1.48
CDKN1A-202ENST00000373711 PKD2Q13563 968 aa24.31■■□□□ 1.48
CDKN1A-202ENST00000373711 PLEKHH2Q8IVE3 1493 aa24.31■■□□□ 1.48
CDKN1A-202ENST00000373711 CEP170BQ9Y4F5 1589 aaPredicted RBP24.3■■□□□ 1.48
CDKN1A-202ENST00000373711 PLXNC1O60486 1568 aa24.29■■□□□ 1.48
CDKN1A-202ENST00000373711 ZNF777Q9ULD5 760 aaPredicted RBP24.29■■□□□ 1.48
CDKN1A-202ENST00000373711 INO80Q9ULG1 1556 aaPredicted RBP24.29■■□□□ 1.48
CDKN1A-202ENST00000373711 UBAP1LF5GYI3 381 aa24.27■■□□□ 1.48
CDKN1A-202ENST00000373711 ADGBQ8N7X0 1667 aa24.26■■□□□ 1.47
CDKN1A-202ENST00000373711 NCKAP5LQ9HCH0 1330 aa24.26■■□□□ 1.47
CDKN1A-202ENST00000373711 KIAA1107Q9UPP5 1409 aa24.26■■□□□ 1.47
CDKN1A-202ENST00000373711 A2MP01023 1474 aa24.26■■□□□ 1.47
CDKN1A-202ENST00000373711 ZNF335Q9H4Z2 1342 aaPredicted RBP24.25■■□□□ 1.47
CDKN1A-202ENST00000373711 TCOF1Q13428 1488 aaKnown RBP24.25■■□□□ 1.47
CDKN1A-202ENST00000373711 GPATCH8Q9UKJ3 1502 aaKnown RBP24.25■■□□□ 1.47
CDKN1A-202ENST00000373711 PTPRKQ15262 1439 aa24.22■■□□□ 1.47
CDKN1A-202ENST00000373711 PPP6R1Q9UPN7 881 aa24.22■■□□□ 1.47
CDKN1A-202ENST00000373711 HNRNPMP52272 730 aaKnown RBP eCLIP24.2■■□□□ 1.46
CDKN1A-202ENST00000373711 POLR1AO95602 1720 aaPredicted RBP24.18■■□□□ 1.46
CDKN1A-202ENST00000373711 CFDP1Q9UEE9 299 aaPredicted RBP24.18■■□□□ 1.46
CDKN1A-202ENST00000373711 CCNB3Q8WWL7 1395 aa24.17■■□□□ 1.46
CDKN1A-202ENST00000373711 GGT6Q6P531 493 aa24.17■■□□□ 1.46
CDKN1A-202ENST00000373711 A2ML1A8K2U0 1454 aa24.16■■□□□ 1.46
CDKN1A-202ENST00000373711 DNMT1P26358 1616 aaKnown RBP24.13■■□□□ 1.45
CDKN1A-202ENST00000373711 CPS1P31327 1500 aa24.13■■□□□ 1.45
CDKN1A-202ENST00000373711 FAM135AQ9P2D6 1515 aa24.1■■□□□ 1.45
CDKN1A-202ENST00000373711 MTUS2Q5JR59 1369 aa24.1■■□□□ 1.45
CDKN1A-202ENST00000373711 CHIC1Q5VXU3 224 aa24.09■■□□□ 1.45
CDKN1A-202ENST00000373711 TOM1O60784 492 aa24.07■■□□□ 1.44
CDKN1A-202ENST00000373711 RTEL1-TNFRSF6BF6WH68 1400 aa24.07■■□□□ 1.44
CDKN1A-202ENST00000373711 MED1Q15648 1581 aaPredicted RBP24.07■■□□□ 1.44
CDKN1A-202ENST00000373711 SCAF1Q9H7N4 1312 aaKnown RBP24.07■■□□□ 1.44
CDKN1A-202ENST00000373711 TIAM1Q13009 1591 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms