RNA–Protein interactions for RNA: ENST00000373691.4

CXCR3-201, Transcript of C-X-C motif chemokine receptor 3, humanhuman

TSL 1 (best) BASIC

Gene CXCR3, Length 1,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR3-201ENST00000373691 HIRIP3Q9BW71 556 aaPredicted RBP28.69■■■□□ 2.18
CXCR3-201ENST00000373691 NUP160Q12769 1436 aa28.69■■■□□ 2.18
CXCR3-201ENST00000373691 MPHOSPH9Q99550 1183 aa28.67■■■□□ 2.18
CXCR3-201ENST00000373691 SUPT16HQ9Y5B9 1047 aaKnown RBP28.66■■■□□ 2.18
CXCR3-201ENST00000373691 ANP32CO43423 234 aa28.66■■■□□ 2.18
CXCR3-201ENST00000373691 CARMIL2Q6F5E8 1435 aa28.63■■■□□ 2.17
CXCR3-201ENST00000373691 ADGBQ8N7X0 1667 aa28.62■■■□□ 2.17
CXCR3-201ENST00000373691 CHMP7Q8WUX9 453 aaPredicted RBP28.62■■■□□ 2.17
CXCR3-201ENST00000373691 CAMSAP2Q08AD1 1489 aa28.61■■■□□ 2.17
CXCR3-201ENST00000373691 PLB1Q6P1J6 1458 aa28.61■■■□□ 2.17
CXCR3-201ENST00000373691 PRG4Q92954 1404 aaPredicted RBP28.61■■■□□ 2.17
CXCR3-201ENST00000373691 CROCC2H7BZ55 1655 aa28.58■■■□□ 2.17
CXCR3-201ENST00000373691 ANKRD30BQ9BXX2 1392 aa28.57■■■□□ 2.16
CXCR3-201ENST00000373691 RPRD2Q5VT52 1461 aaKnown RBP28.57■■■□□ 2.16
CXCR3-201ENST00000373691 KIF14Q15058 1648 aa28.57■■■□□ 2.16
CXCR3-201ENST00000373691 GPATCH8Q9UKJ3 1502 aaKnown RBP28.56■■■□□ 2.16
CXCR3-201ENST00000373691 ZNF644Q9H582 1327 aaPredicted RBP28.56■■■□□ 2.16
CXCR3-201ENST00000373691 ADGRL2O95490 1459 aa28.55■■■□□ 2.16
CXCR3-201ENST00000373691 ABCA8O94911 1581 aa28.54■■■□□ 2.16
CXCR3-201ENST00000373691 TEX14Q8IWB6 1497 aa28.52■■■□□ 2.16
CXCR3-201ENST00000373691 HSPA5P11021 654 aaKnown RBP28.5■■■□□ 2.15
CXCR3-201ENST00000373691 JPH4Q96JJ6 628 aa28.49■■■□□ 2.15
CXCR3-201ENST00000373691 PZPP20742 1482 aa28.47■■■□□ 2.15
CXCR3-201ENST00000373691 L3MBTL2Q969R5 705 aa28.47■■■□□ 2.15
CXCR3-201ENST00000373691 CFDP1Q9UEE9 299 aaPredicted RBP28.47■■■□□ 2.15
CXCR3-201ENST00000373691 NCOA1Q15788 1441 aa28.47■■■□□ 2.15
CXCR3-201ENST00000373691 EIF4G2P78344 907 aaKnown RBP eCLIP28.46■■■□□ 2.15
CXCR3-201ENST00000373691 WASHC2AQ641Q2 1341 aa28.42■■■□□ 2.14
CXCR3-201ENST00000373691 FOXD1Q16676 465 aa28.42■■■□□ 2.14
CXCR3-201ENST00000373691 ABCC10Q5T3U5 1492 aa28.42■■■□□ 2.14
CXCR3-201ENST00000373691 CDC42BPAQ5VT25 1732 aa28.42■■■□□ 2.14
CXCR3-201ENST00000373691 FBLN2P98095 1184 aa28.42■■■□□ 2.14
CXCR3-201ENST00000373691 SHANK2Q9UPX8 1470 aa28.4■■■□□ 2.14
CXCR3-201ENST00000373691 SLC4A1APQ9BWU0 796 aaKnown RBP28.4■■■□□ 2.14
CXCR3-201ENST00000373691 CNTLNQ9NXG0 1405 aa28.38■■■□□ 2.13
CXCR3-201ENST00000373691 ANKRD30AQ9BXX3 1397 aa28.37■■■□□ 2.13
CXCR3-201ENST00000373691 ATP10BO94823 1461 aa28.37■■■□□ 2.13
CXCR3-201ENST00000373691 POLR1AO95602 1720 aaPredicted RBP28.35■■■□□ 2.13
CXCR3-201ENST00000373691 KIAA1107Q9UPP5 1409 aa28.35■■■□□ 2.13
CXCR3-201ENST00000373691 MBD5Q9P267 1494 aa28.33■■■□□ 2.13
CXCR3-201ENST00000373691 PLEKHD1A6NEE1 506 aa28.32■■■□□ 2.12
CXCR3-201ENST00000373691 CCDC7Q96M83 1385 aa28.31■■■□□ 2.12
CXCR3-201ENST00000373691 NBPF8Q3BBV2 869 aa28.31■■■□□ 2.12
CXCR3-201ENST00000373691 SPATA31E1Q6ZUB1 1445 aa28.29■■■□□ 2.12
CXCR3-201ENST00000373691 ZNF777Q9ULD5 760 aaPredicted RBP28.27■■■□□ 2.12
CXCR3-201ENST00000373691 ANKRD50Q9ULJ7 1429 aa28.27■■■□□ 2.12
CXCR3-201ENST00000373691 KDM5DQ9BY66 1539 aa28.27■■■□□ 2.12
CXCR3-201ENST00000373691 ARHGEF5Q12774 1597 aa28.27■■■□□ 2.12
CXCR3-201ENST00000373691 C9orf84Q5VXU9 1444 aa28.26■■■□□ 2.11
CXCR3-201ENST00000373691 C11orf95C9JLR9 678 aaPredicted RBP28.19■■■□□ 2.1
CXCR3-201ENST00000373691 FKBP8Q14318 412 aa28.19■■■□□ 2.1
CXCR3-201ENST00000373691 PTPRGP23470 1445 aa28.19■■■□□ 2.1
CXCR3-201ENST00000373691 PREX2Q70Z35 1606 aa28.18■■■□□ 2.1
CXCR3-201ENST00000373691 NEFLP07196 543 aa28.18■■■□□ 2.1
CXCR3-201ENST00000373691 PKD2Q13563 968 aa28.16■■■□□ 2.1
CXCR3-201ENST00000373691 SHROOM2Q13796 1616 aa28.15■■■□□ 2.1
CXCR3-201ENST00000373691 CHD1O14646 1710 aa28.15■■■□□ 2.1
CXCR3-201ENST00000373691 ARHGEF12Q9NZN5 1544 aa28.14■■■□□ 2.09
CXCR3-201ENST00000373691 KIF7Q2M1P5 1343 aa28.13■■■□□ 2.09
CXCR3-201ENST00000373691 SAMD9LQ8IVG5 1584 aa28.13■■■□□ 2.09
CXCR3-201ENST00000373691 UHRF1BP1Q6BDS2 1440 aa28.13■■■□□ 2.09
CXCR3-201ENST00000373691 CDC42BPBQ9Y5S2 1711 aa28.12■■■□□ 2.09
CXCR3-201ENST00000373691 CCDC141Q6ZP82 1450 aa28.1■■■□□ 2.09
CXCR3-201ENST00000373691 NUP155O75694 1391 aa28.09■■■□□ 2.09
CXCR3-201ENST00000373691 TSPY4P0CV99 314 aa28.09■■■□□ 2.09
CXCR3-201ENST00000373691 TSPY10P0CW01 314 aa28.09■■■□□ 2.09
CXCR3-201ENST00000373691 KDM5CP41229 1560 aa28.09■■■□□ 2.09
CXCR3-201ENST00000373691 PRKRIP1Q9H875 184 aaPredicted RBP28.09■■■□□ 2.09
CXCR3-201ENST00000373691 KIF15Q9NS87 1388 aa28.08■■■□□ 2.09
CXCR3-201ENST00000373691 TSHZ2Q9NRE2 1034 aa28.08■■■□□ 2.09
CXCR3-201ENST00000373691 HNRNPUQ00839 825 aaKnown RBP eCLIP28.08■■■□□ 2.09
CXCR3-201ENST00000373691 RALGAPBQ86X10 1494 aa28.07■■■□□ 2.08
CXCR3-201ENST00000373691 MAST1Q9Y2H9 1570 aa28.06■■■□□ 2.08
CXCR3-201ENST00000373691 BCANQ96GW7 911 aa28.04■■■□□ 2.08
CXCR3-201ENST00000373691 USP47Q96K76 1375 aa28.04■■■□□ 2.08
CXCR3-201ENST00000373691 BCORL1Q5H9F3 1711 aa28.04■■■□□ 2.08
CXCR3-201ENST00000373691 RSPH4AQ5TD94 716 aa28.02■■■□□ 2.08
CXCR3-201ENST00000373691 ARID4BQ4LE39 1312 aaPredicted RBP28.01■■■□□ 2.07
CXCR3-201ENST00000373691 HNRNPMP52272 730 aaKnown RBP eCLIP28■■■□□ 2.07
CXCR3-201ENST00000373691 TTC37Q6PGP7 1564 aa27.98■■■□□ 2.07
CXCR3-201ENST00000373691 CCDC184Q52MB2 194 aa27.98■■■□□ 2.07
CXCR3-201ENST00000373691 ABCC2Q92887 1545 aa27.97■■■□□ 2.07
CXCR3-201ENST00000373691 UNC13BO14795 1591 aa27.97■■■□□ 2.07
CXCR3-201ENST00000373691 FAM135AQ9P2D6 1515 aa27.97■■■□□ 2.07
CXCR3-201ENST00000373691 MYT1Q01538 1121 aa27.95■■■□□ 2.07
CXCR3-201ENST00000373691 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.95■■■□□ 2.07
CXCR3-201ENST00000373691 SYCP2Q9BX26 1530 aa27.95■■■□□ 2.06
CXCR3-201ENST00000373691 DHX29Q7Z478 1369 aaKnown RBP27.95■■■□□ 2.06
CXCR3-201ENST00000373691 PLXNC1O60486 1568 aa27.94■■■□□ 2.06
CXCR3-201ENST00000373691 MYO5CQ9NQX4 1742 aa27.93■■■□□ 2.06
CXCR3-201ENST00000373691 MRS2Q9HD23 443 aa27.93■■■□□ 2.06
CXCR3-201ENST00000373691 ARHGAP5Q13017 1502 aa27.93■■■□□ 2.06
CXCR3-201ENST00000373691 PLEKHH2Q8IVE3 1493 aa27.92■■■□□ 2.06
CXCR3-201ENST00000373691 ROCK2O75116 1388 aaKnown RBP27.9■■■□□ 2.06
CXCR3-201ENST00000373691 ZNF326Q5BKZ1 582 aaKnown RBP27.89■■■□□ 2.06
CXCR3-201ENST00000373691 ZBED9Q6R2W3 1325 aa27.87■■■□□ 2.05
CXCR3-201ENST00000373691 ERCC6L2Q5T890 1561 aa27.87■■■□□ 2.05
CXCR3-201ENST00000373691 IQGAP3Q86VI3 1631 aa27.85■■■□□ 2.05
CXCR3-201ENST00000373691 FAM9BQ8IZU0 186 aa27.82■■■□□ 2.04
CXCR3-201ENST00000373691 ERICH6BQ5W0A0 696 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms