RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 TROQ12816 1431 aaPredicted RBP23.6■■□□□ 1.37
HDAC8-206ENST00000373571 ZNF644Q9H582 1327 aaPredicted RBP23.6■■□□□ 1.37
HDAC8-206ENST00000373571 PLB1Q6P1J6 1458 aa23.59■■□□□ 1.37
HDAC8-206ENST00000373571 PRG4Q92954 1404 aaPredicted RBP23.59■■□□□ 1.37
HDAC8-206ENST00000373571 CCER2I3L3R5 266 aa23.59■■□□□ 1.37
HDAC8-206ENST00000373571 FBLN2P98095 1184 aa23.59■■□□□ 1.37
HDAC8-206ENST00000373571 SUPT16HQ9Y5B9 1047 aaKnown RBP23.59■■□□□ 1.37
HDAC8-206ENST00000373571 ITSN2Q9NZM3 1697 aa23.57■■□□□ 1.36
HDAC8-206ENST00000373571 NUP160Q12769 1436 aa23.57■■□□□ 1.36
HDAC8-206ENST00000373571 CARMIL2Q6F5E8 1435 aa23.56■■□□□ 1.36
HDAC8-206ENST00000373571 ADCY10Q96PN6 1610 aa23.55■■□□□ 1.36
HDAC8-206ENST00000373571 CAMSAP2Q08AD1 1489 aa23.54■■□□□ 1.36
HDAC8-206ENST00000373571 KIF14Q15058 1648 aa23.53■■□□□ 1.36
HDAC8-206ENST00000373571 FOXD1Q16676 465 aa23.53■■□□□ 1.36
HDAC8-206ENST00000373571 JPH4Q96JJ6 628 aa23.52■■□□□ 1.36
HDAC8-206ENST00000373571 CFDP1Q9UEE9 299 aaPredicted RBP23.5■■□□□ 1.35
HDAC8-206ENST00000373571 GPATCH8Q9UKJ3 1502 aaKnown RBP23.5■■□□□ 1.35
HDAC8-206ENST00000373571 ADGBQ8N7X0 1667 aa23.49■■□□□ 1.35
HDAC8-206ENST00000373571 ANKRD30BQ9BXX2 1392 aa23.49■■□□□ 1.35
HDAC8-206ENST00000373571 L3MBTL2Q969R5 705 aa23.48■■□□□ 1.35
HDAC8-206ENST00000373571 HSPA5P11021 654 aaKnown RBP23.48■■□□□ 1.35
HDAC8-206ENST00000373571 RPRD2Q5VT52 1461 aaKnown RBP23.47■■□□□ 1.35
HDAC8-206ENST00000373571 CROCC2H7BZ55 1655 aa23.46■■□□□ 1.35
HDAC8-206ENST00000373571 EIF4G2P78344 907 aaKnown RBP eCLIP23.44■■□□□ 1.34
HDAC8-206ENST00000373571 SLC4A1APQ9BWU0 796 aaKnown RBP23.44■■□□□ 1.34
HDAC8-206ENST00000373571 ABCA8O94911 1581 aa23.44■■□□□ 1.34
HDAC8-206ENST00000373571 NCOA1Q15788 1441 aa23.43■■□□□ 1.34
HDAC8-206ENST00000373571 ZNF777Q9ULD5 760 aaPredicted RBP23.42■■□□□ 1.34
HDAC8-206ENST00000373571 WASHC2AQ641Q2 1341 aa23.42■■□□□ 1.34
HDAC8-206ENST00000373571 TEX14Q8IWB6 1497 aa23.42■■□□□ 1.34
HDAC8-206ENST00000373571 ADGRL2O95490 1459 aa23.41■■□□□ 1.34
HDAC8-206ENST00000373571 PZPP20742 1482 aa23.4■■□□□ 1.34
HDAC8-206ENST00000373571 CDC42BPAQ5VT25 1732 aa23.38■■□□□ 1.33
HDAC8-206ENST00000373571 PLEKHD1A6NEE1 506 aa23.36■■□□□ 1.33
HDAC8-206ENST00000373571 ATP10BO94823 1461 aa23.36■■□□□ 1.33
HDAC8-206ENST00000373571 ANKRD30AQ9BXX3 1397 aa23.35■■□□□ 1.33
HDAC8-206ENST00000373571 ABCC10Q5T3U5 1492 aa23.34■■□□□ 1.33
HDAC8-206ENST00000373571 NBPF8Q3BBV2 869 aa23.34■■□□□ 1.33
HDAC8-206ENST00000373571 CNTLNQ9NXG0 1405 aa23.31■■□□□ 1.32
HDAC8-206ENST00000373571 KIAA1107Q9UPP5 1409 aa23.3■■□□□ 1.32
HDAC8-206ENST00000373571 SHANK2Q9UPX8 1470 aa23.29■■□□□ 1.32
HDAC8-206ENST00000373571 ANKRD50Q9ULJ7 1429 aa23.28■■□□□ 1.32
HDAC8-206ENST00000373571 CCDC7Q96M83 1385 aa23.28■■□□□ 1.32
HDAC8-206ENST00000373571 C11orf95C9JLR9 678 aaPredicted RBP23.26■■□□□ 1.31
HDAC8-206ENST00000373571 C9orf84Q5VXU9 1444 aa23.26■■□□□ 1.31
HDAC8-206ENST00000373571 FKBP8Q14318 412 aa23.25■■□□□ 1.31
HDAC8-206ENST00000373571 POLR1AO95602 1720 aaPredicted RBP23.24■■□□□ 1.31
HDAC8-206ENST00000373571 SPATA31E1Q6ZUB1 1445 aa23.24■■□□□ 1.31
HDAC8-206ENST00000373571 MBD5Q9P267 1494 aa23.24■■□□□ 1.31
HDAC8-206ENST00000373571 PTPRGP23470 1445 aa23.23■■□□□ 1.31
HDAC8-206ENST00000373571 PKD2Q13563 968 aa23.23■■□□□ 1.31
HDAC8-206ENST00000373571 NEFLP07196 543 aa23.2■■□□□ 1.3
HDAC8-206ENST00000373571 CHD1O14646 1710 aa23.19■■□□□ 1.3
HDAC8-206ENST00000373571 ARHGEF5Q12774 1597 aa23.19■■□□□ 1.3
HDAC8-206ENST00000373571 BCANQ96GW7 911 aa23.19■■□□□ 1.3
HDAC8-206ENST00000373571 TSPY4P0CV99 314 aa23.18■■□□□ 1.3
HDAC8-206ENST00000373571 TSPY10P0CW01 314 aa23.18■■□□□ 1.3
HDAC8-206ENST00000373571 NUP155O75694 1391 aa23.17■■□□□ 1.3
HDAC8-206ENST00000373571 HNRNPUQ00839 825 aaKnown RBP eCLIP23.17■■□□□ 1.3
HDAC8-206ENST00000373571 KIF7Q2M1P5 1343 aa23.16■■□□□ 1.3
HDAC8-206ENST00000373571 KDM5DQ9BY66 1539 aa23.16■■□□□ 1.3
HDAC8-206ENST00000373571 PREX2Q70Z35 1606 aa23.15■■□□□ 1.3
HDAC8-206ENST00000373571 CDC42BPBQ9Y5S2 1711 aa23.15■■□□□ 1.3
HDAC8-206ENST00000373571 HNRNPMP52272 730 aaKnown RBP eCLIP23.14■■□□□ 1.3
HDAC8-206ENST00000373571 PRKRIP1Q9H875 184 aaPredicted RBP23.14■■□□□ 1.29
HDAC8-206ENST00000373571 SAMD9LQ8IVG5 1584 aa23.13■■□□□ 1.29
HDAC8-206ENST00000373571 KIF15Q9NS87 1388 aa23.13■■□□□ 1.29
HDAC8-206ENST00000373571 ZNF326Q5BKZ1 582 aaKnown RBP23.11■■□□□ 1.29
HDAC8-206ENST00000373571 CCDC141Q6ZP82 1450 aa23.11■■□□□ 1.29
HDAC8-206ENST00000373571 SHROOM2Q13796 1616 aa23.11■■□□□ 1.29
HDAC8-206ENST00000373571 CCDC184Q52MB2 194 aa23.09■■□□□ 1.29
HDAC8-206ENST00000373571 USP47Q96K76 1375 aa23.09■■□□□ 1.29
HDAC8-206ENST00000373571 TSHZ2Q9NRE2 1034 aa23.09■■□□□ 1.29
HDAC8-206ENST00000373571 KDM5CP41229 1560 aa23.08■■□□□ 1.28
HDAC8-206ENST00000373571 UHRF1BP1Q6BDS2 1440 aa23.07■■□□□ 1.28
HDAC8-206ENST00000373571 BCORL1Q5H9F3 1711 aa23.06■■□□□ 1.28
HDAC8-206ENST00000373571 ARHGEF12Q9NZN5 1544 aa23.06■■□□□ 1.28
HDAC8-206ENST00000373571 TTC37Q6PGP7 1564 aa23.04■■□□□ 1.28
HDAC8-206ENST00000373571 RSPH4AQ5TD94 716 aa23.04■■□□□ 1.28
HDAC8-206ENST00000373571 RALGAPBQ86X10 1494 aa23.04■■□□□ 1.28
HDAC8-206ENST00000373571 MRS2Q9HD23 443 aa23.03■■□□□ 1.28
HDAC8-206ENST00000373571 SYCP2Q9BX26 1530 aa23.02■■□□□ 1.28
HDAC8-206ENST00000373571 ARHGAP5Q13017 1502 aa23.02■■□□□ 1.27
HDAC8-206ENST00000373571 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.02■■□□□ 1.27
HDAC8-206ENST00000373571 FAM135AQ9P2D6 1515 aa23.01■■□□□ 1.27
HDAC8-206ENST00000373571 ABCC2Q92887 1545 aa23■■□□□ 1.27
HDAC8-206ENST00000373571 ERCC6L2Q5T890 1561 aa22.99■■□□□ 1.27
HDAC8-206ENST00000373571 FAM9BQ8IZU0 186 aa22.99■■□□□ 1.27
HDAC8-206ENST00000373571 MAST1Q9Y2H9 1570 aa22.99■■□□□ 1.27
HDAC8-206ENST00000373571 ARID4BQ4LE39 1312 aaPredicted RBP22.97■■□□□ 1.27
HDAC8-206ENST00000373571 MYO5CQ9NQX4 1742 aa22.97■■□□□ 1.27
HDAC8-206ENST00000373571 DHX29Q7Z478 1369 aaKnown RBP22.97■■□□□ 1.27
HDAC8-206ENST00000373571 POLR3GLQ9BT43 218 aa22.96■■□□□ 1.27
HDAC8-206ENST00000373571 CARD11Q9BXL7 1154 aa22.95■■□□□ 1.26
HDAC8-206ENST00000373571 UNC13BO14795 1591 aa22.94■■□□□ 1.26
HDAC8-206ENST00000373571 KDM2AQ9Y2K7 1162 aa22.94■■□□□ 1.26
HDAC8-206ENST00000373571 DCAF11Q8TEB1 546 aa22.93■■□□□ 1.26
HDAC8-206ENST00000373571 PLXNC1O60486 1568 aa22.91■■□□□ 1.26
HDAC8-206ENST00000373571 PLEKHH2Q8IVE3 1493 aa22.91■■□□□ 1.26
HDAC8-206ENST00000373571 ZBED9Q6R2W3 1325 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms