RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 AKNAQ7Z591 1439 aa33.8■■■■□ 3
CDK9-201ENST00000373264 JPH4Q96JJ6 628 aa33.76■■■■□ 3
CDK9-201ENST00000373264 CDK11AQ9UQ88 783 aaPredicted RBP33.75■■■□□ 2.99
CDK9-201ENST00000373264 DNMT1P26358 1616 aaKnown RBP33.73■■■□□ 2.99
CDK9-201ENST00000373264 ZNF777Q9ULD5 760 aaPredicted RBP33.72■■■□□ 2.99
CDK9-201ENST00000373264 KIF14Q15058 1648 aa33.7■■■□□ 2.99
CDK9-201ENST00000373264 TROQ12816 1431 aaPredicted RBP33.7■■■□□ 2.99
CDK9-201ENST00000373264 L3MBTL2Q969R5 705 aa33.68■■■□□ 2.98
CDK9-201ENST00000373264 CFDP1Q9UEE9 299 aaPredicted RBP33.68■■■□□ 2.98
CDK9-201ENST00000373264 SUPT16HQ9Y5B9 1047 aaKnown RBP33.68■■■□□ 2.98
CDK9-201ENST00000373264 NUP160Q12769 1436 aa33.68■■■□□ 2.98
CDK9-201ENST00000373264 ROCK1Q13464 1354 aa33.65■■■□□ 2.98
CDK9-201ENST00000373264 ANP32CO43423 234 aa33.64■■■□□ 2.98
CDK9-201ENST00000373264 HSPA5P11021 654 aaKnown RBP33.63■■■□□ 2.97
CDK9-201ENST00000373264 CAMSAP2Q08AD1 1489 aa33.63■■■□□ 2.97
CDK9-201ENST00000373264 GPATCH8Q9UKJ3 1502 aaKnown RBP33.62■■■□□ 2.97
CDK9-201ENST00000373264 CARMIL2Q6F5E8 1435 aa33.6■■■□□ 2.97
CDK9-201ENST00000373264 SLC4A1APQ9BWU0 796 aaKnown RBP33.59■■■□□ 2.97
CDK9-201ENST00000373264 ANKRD30BQ9BXX2 1392 aa33.57■■■□□ 2.96
CDK9-201ENST00000373264 WASHC2AQ641Q2 1341 aa33.55■■■□□ 2.96
CDK9-201ENST00000373264 NBPF8Q3BBV2 869 aa33.52■■■□□ 2.96
CDK9-201ENST00000373264 NCOA1Q15788 1441 aa33.5■■■□□ 2.95
CDK9-201ENST00000373264 CCER2I3L3R5 266 aa33.5■■■□□ 2.95
CDK9-201ENST00000373264 ITSN2Q9NZM3 1697 aa33.48■■■□□ 2.95
CDK9-201ENST00000373264 ATP10BO94823 1461 aa33.47■■■□□ 2.95
CDK9-201ENST00000373264 ADCY10Q96PN6 1610 aa33.47■■■□□ 2.95
CDK9-201ENST00000373264 RPRD2Q5VT52 1461 aaKnown RBP33.46■■■□□ 2.95
CDK9-201ENST00000373264 C11orf95C9JLR9 678 aaPredicted RBP33.46■■■□□ 2.95
CDK9-201ENST00000373264 PZPP20742 1482 aa33.46■■■□□ 2.95
CDK9-201ENST00000373264 ABCA8O94911 1581 aa33.45■■■□□ 2.95
CDK9-201ENST00000373264 PLEKHD1A6NEE1 506 aa33.45■■■□□ 2.95
CDK9-201ENST00000373264 EIF4G2P78344 907 aaKnown RBP eCLIP33.45■■■□□ 2.95
CDK9-201ENST00000373264 TEX14Q8IWB6 1497 aa33.43■■■□□ 2.94
CDK9-201ENST00000373264 CDC42BPAQ5VT25 1732 aa33.39■■■□□ 2.93
CDK9-201ENST00000373264 CROCC2H7BZ55 1655 aa33.37■■■□□ 2.93
CDK9-201ENST00000373264 ADGBQ8N7X0 1667 aa33.37■■■□□ 2.93
CDK9-201ENST00000373264 ABCC10Q5T3U5 1492 aa33.36■■■□□ 2.93
CDK9-201ENST00000373264 BCANQ96GW7 911 aa33.34■■■□□ 2.93
CDK9-201ENST00000373264 PKD2Q13563 968 aa33.32■■■□□ 2.92
CDK9-201ENST00000373264 ADGRL2O95490 1459 aa33.32■■■□□ 2.92
CDK9-201ENST00000373264 ANKRD30AQ9BXX3 1397 aa33.3■■■□□ 2.92
CDK9-201ENST00000373264 HNRNPMP52272 730 aaKnown RBP eCLIP33.3■■■□□ 2.92
CDK9-201ENST00000373264 PTPRGP23470 1445 aa33.29■■■□□ 2.92
CDK9-201ENST00000373264 ANKRD50Q9ULJ7 1429 aa33.28■■■□□ 2.92
CDK9-201ENST00000373264 FKBP8Q14318 412 aa33.26■■■□□ 2.91
CDK9-201ENST00000373264 ZNF326Q5BKZ1 582 aaKnown RBP33.26■■■□□ 2.91
CDK9-201ENST00000373264 CCDC184Q52MB2 194 aa33.25■■■□□ 2.91
CDK9-201ENST00000373264 C9orf84Q5VXU9 1444 aa33.24■■■□□ 2.91
CDK9-201ENST00000373264 KIAA1107Q9UPP5 1409 aa33.23■■■□□ 2.91
CDK9-201ENST00000373264 CCDC7Q96M83 1385 aa33.23■■■□□ 2.91
CDK9-201ENST00000373264 CHD1O14646 1710 aa33.21■■■□□ 2.91
CDK9-201ENST00000373264 CNTLNQ9NXG0 1405 aa33.2■■■□□ 2.91
CDK9-201ENST00000373264 NUP155O75694 1391 aa33.18■■■□□ 2.9
CDK9-201ENST00000373264 SPATA31E1Q6ZUB1 1445 aa33.18■■■□□ 2.9
CDK9-201ENST00000373264 KIF7Q2M1P5 1343 aa33.15■■■□□ 2.9
CDK9-201ENST00000373264 TSPY4P0CV99 314 aa33.15■■■□□ 2.9
CDK9-201ENST00000373264 TSPY10P0CW01 314 aa33.15■■■□□ 2.9
CDK9-201ENST00000373264 HNRNPUQ00839 825 aaKnown RBP eCLIP33.14■■■□□ 2.9
CDK9-201ENST00000373264 ERCC6L2Q5T890 1561 aa33.12■■■□□ 2.89
CDK9-201ENST00000373264 MBD5Q9P267 1494 aa33.11■■■□□ 2.89
CDK9-201ENST00000373264 KIF15Q9NS87 1388 aa33.1■■■□□ 2.89
CDK9-201ENST00000373264 SHANK2Q9UPX8 1470 aa33.09■■■□□ 2.89
CDK9-201ENST00000373264 CDC42BPBQ9Y5S2 1711 aa33.08■■■□□ 2.89
CDK9-201ENST00000373264 SAMD9LQ8IVG5 1584 aa33.08■■■□□ 2.89
CDK9-201ENST00000373264 PRKRIP1Q9H875 184 aaPredicted RBP33.07■■■□□ 2.88
CDK9-201ENST00000373264 CNGB1Q14028 1251 aaPredicted RBP33.06■■■□□ 2.88
CDK9-201ENST00000373264 POLR3GLQ9BT43 218 aa33.04■■■□□ 2.88
CDK9-201ENST00000373264 KDM2AQ9Y2K7 1162 aa33■■■□□ 2.87
CDK9-201ENST00000373264 USP47Q96K76 1375 aa33■■■□□ 2.87
CDK9-201ENST00000373264 TTC37Q6PGP7 1564 aa33■■■□□ 2.87
CDK9-201ENST00000373264 PREX2Q70Z35 1606 aa32.99■■■□□ 2.87
CDK9-201ENST00000373264 BCORL1Q5H9F3 1711 aa32.99■■■□□ 2.87
CDK9-201ENST00000373264 ARHGEF5Q12774 1597 aa32.98■■■□□ 2.87
CDK9-201ENST00000373264 FAM9BQ8IZU0 186 aa32.97■■■□□ 2.87
CDK9-201ENST00000373264 TSHZ2Q9NRE2 1034 aa32.97■■■□□ 2.87
CDK9-201ENST00000373264 CCDC141Q6ZP82 1450 aa32.96■■■□□ 2.87
CDK9-201ENST00000373264 SHROOM2Q13796 1616 aa32.95■■■□□ 2.87
CDK9-201ENST00000373264 SYCP2Q9BX26 1530 aa32.95■■■□□ 2.87
CDK9-201ENST00000373264 NEFLP07196 543 aa32.94■■■□□ 2.86
CDK9-201ENST00000373264 MRS2Q9HD23 443 aa32.93■■■□□ 2.86
CDK9-201ENST00000373264 POLR1AO95602 1720 aaPredicted RBP32.92■■■□□ 2.86
CDK9-201ENST00000373264 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.92■■■□□ 2.865e-6■■■■□ 21.9
CDK9-201ENST00000373264 ARHGAP5Q13017 1502 aa32.91■■■□□ 2.86
CDK9-201ENST00000373264 KDM5DQ9BY66 1539 aa32.91■■■□□ 2.86
CDK9-201ENST00000373264 DCAF11Q8TEB1 546 aa32.89■■■□□ 2.86
CDK9-201ENST00000373264 IRX6P78412 446 aaPredicted RBP32.89■■■□□ 2.86
CDK9-201ENST00000373264 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.88■■■□□ 2.852e-7■□□□□ 10.1
CDK9-201ENST00000373264 KDM5CP41229 1560 aa32.88■■■□□ 2.85
CDK9-201ENST00000373264 CARD11Q9BXL7 1154 aa32.85■■■□□ 2.85
CDK9-201ENST00000373264 FAM135AQ9P2D6 1515 aa32.85■■■□□ 2.85
CDK9-201ENST00000373264 ABCC2Q92887 1545 aa32.83■■■□□ 2.85
CDK9-201ENST00000373264 UHRF1BP1Q6BDS2 1440 aa32.83■■■□□ 2.85
CDK9-201ENST00000373264 DHX29Q7Z478 1369 aaKnown RBP32.83■■■□□ 2.85
CDK9-201ENST00000373264 RALGAPBQ86X10 1494 aa32.8■■■□□ 2.84
CDK9-201ENST00000373264 ARHGEF12Q9NZN5 1544 aa32.78■■■□□ 2.84
CDK9-201ENST00000373264 RGL3Q3MIN7 710 aa32.78■■■□□ 2.84
CDK9-201ENST00000373264 ST20-MTHFSA0A0A6YYL1 179 aa32.77■■■□□ 2.84
CDK9-201ENST00000373264 RSPH4AQ5TD94 716 aa32.76■■■□□ 2.83
CDK9-201ENST00000373264 SENP3-EIF4A1A0A087X0R7 540 aa32.74■■■□□ 2.83
CDK9-201ENST00000373264 PLEKHH2Q8IVE3 1493 aa32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms