RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 MAGI1Q96QZ7 1491 aaPredicted RBP15.02■□□□□ -0
LCN2-202ENST00000372998 ANKRD30BQ9BXX2 1392 aa15.02■□□□□ -0
LCN2-202ENST00000372998 CROCC2H7BZ55 1655 aa15.02□□□□□ -0.01
LCN2-202ENST00000372998 DENND4BO75064 1496 aaPredicted RBP15.01□□□□□ -0.01
LCN2-202ENST00000372998 ADGRL2O95490 1459 aa15.01□□□□□ -0.01
LCN2-202ENST00000372998 TROQ12816 1431 aaPredicted RBP15.01□□□□□ -0.01
LCN2-202ENST00000372998 ANP32EQ9BTT0 268 aa15.01□□□□□ -0.01
LCN2-202ENST00000372998 DISP1Q96F81 1524 aa15.01□□□□□ -0.01
LCN2-202ENST00000372998 GRIN2AQ12879 1464 aa15.01□□□□□ -0.01
LCN2-202ENST00000372998 ABCC5O15440 1437 aa15□□□□□ -0.01
LCN2-202ENST00000372998 CCDC7Q96M83 1385 aa15□□□□□ -0.01
LCN2-202ENST00000372998 CARMIL2Q6F5E8 1435 aa15□□□□□ -0.01
LCN2-202ENST00000372998 KDM6BO15054 1643 aa14.99□□□□□ -0.01
LCN2-202ENST00000372998 WASHC2AQ641Q2 1341 aa14.99□□□□□ -0.01
LCN2-202ENST00000372998 NUP153P49790 1475 aaKnown RBP14.99□□□□□ -0.01
LCN2-202ENST00000372998 TEX14Q8IWB6 1497 aa14.98□□□□□ -0.01
LCN2-202ENST00000372998 HNRNPUQ00839 825 aaKnown RBP eCLIP14.98□□□□□ -0.01
LCN2-202ENST00000372998 CHIC2Q9UKJ5 165 aa14.98□□□□□ -0.01
LCN2-202ENST00000372998 L3MBTL2Q969R5 705 aa14.97□□□□□ -0.01
LCN2-202ENST00000372998 HIRIP3Q9BW71 556 aaPredicted RBP14.97□□□□□ -0.01
LCN2-202ENST00000372998 ROCK2O75116 1388 aaKnown RBP14.96□□□□□ -0.02
LCN2-202ENST00000372998 CAMSAP2Q08AD1 1489 aa14.95□□□□□ -0.02
LCN2-202ENST00000372998 SHANK2Q9UPX8 1470 aa14.95□□□□□ -0.02
LCN2-202ENST00000372998 EIF4G3O43432 1585 aaKnown RBP14.95□□□□□ -0.02
LCN2-202ENST00000372998 ANKRD30AQ9BXX3 1397 aa14.95□□□□□ -0.02
LCN2-202ENST00000372998 KIF14Q15058 1648 aa14.95□□□□□ -0.02
LCN2-202ENST00000372998 SLC4A1APQ9BWU0 796 aaKnown RBP14.94□□□□□ -0.02
LCN2-202ENST00000372998 SYNJ2O15056 1496 aa14.94□□□□□ -0.02
LCN2-202ENST00000372998 KIAA1107Q9UPP5 1409 aa14.93□□□□□ -0.02
LCN2-202ENST00000372998 ZBED9Q6R2W3 1325 aa14.92□□□□□ -0.02
LCN2-202ENST00000372998 SPATA31E1Q6ZUB1 1445 aa14.92□□□□□ -0.02
LCN2-202ENST00000372998 ARHGEF12Q9NZN5 1544 aa14.92□□□□□ -0.02
LCN2-202ENST00000372998 BCANQ96GW7 911 aa14.92□□□□□ -0.02
LCN2-202ENST00000372998 PRKRIP1Q9H875 184 aaPredicted RBP14.92□□□□□ -0.02
LCN2-202ENST00000372998 PPP4R2Q9NY27 417 aa14.92□□□□□ -0.02
LCN2-202ENST00000372998 KTN1Q86UP2 1357 aaKnown RBP14.91□□□□□ -0.02
LCN2-202ENST00000372998 MBD5Q9P267 1494 aa14.9□□□□□ -0.02
LCN2-202ENST00000372998 CFDP1Q9UEE9 299 aaPredicted RBP14.9□□□□□ -0.02
LCN2-202ENST00000372998 KDM5DQ9BY66 1539 aa14.9□□□□□ -0.02
LCN2-202ENST00000372998 PZPP20742 1482 aa14.89□□□□□ -0.03
LCN2-202ENST00000372998 GPATCH8Q9UKJ3 1502 aaKnown RBP14.89□□□□□ -0.03
LCN2-202ENST00000372998 RBM19Q9Y4C8 960 aaKnown RBP14.88□□□□□ -0.03
LCN2-202ENST00000372998 UHRF1BP1Q6BDS2 1440 aa14.88□□□□□ -0.03
LCN2-202ENST00000372998 FANCIQ9NVI1 1328 aa14.88□□□□□ -0.03
LCN2-202ENST00000372998 ZNF608Q9ULD9 1512 aaPredicted RBP14.87□□□□□ -0.03
LCN2-202ENST00000372998 ARHGEF5Q12774 1597 aa14.86□□□□□ -0.03
LCN2-202ENST00000372998 MRS2Q9HD23 443 aa14.86□□□□□ -0.03
LCN2-202ENST00000372998 MYT1LQ9UL68 1186 aa14.86□□□□□ -0.03
LCN2-202ENST00000372998 NUP160Q12769 1436 aa14.85□□□□□ -0.03
LCN2-202ENST00000372998 RALGAPBQ86X10 1494 aa14.85□□□□□ -0.03
LCN2-202ENST00000372998 RSPH4AQ5TD94 716 aa14.85□□□□□ -0.03
LCN2-202ENST00000372998 CDC42BPAQ5VT25 1732 aa14.84□□□□□ -0.03
LCN2-202ENST00000372998 ABCA8O94911 1581 aa14.84□□□□□ -0.03
LCN2-202ENST00000372998 CEP170Q5SW79 1584 aa14.84□□□□□ -0.03
LCN2-202ENST00000372998 KIF7Q2M1P5 1343 aa14.84□□□□□ -0.03
LCN2-202ENST00000372998 KDM5CP41229 1560 aa14.83□□□□□ -0.04
LCN2-202ENST00000372998 ANKRD50Q9ULJ7 1429 aa14.83□□□□□ -0.04
LCN2-202ENST00000372998 PLEKHD1A6NEE1 506 aa14.82□□□□□ -0.04
LCN2-202ENST00000372998 CHMP7Q8WUX9 453 aaPredicted RBP14.82□□□□□ -0.04
LCN2-202ENST00000372998 PRG4Q92954 1404 aaPredicted RBP14.82□□□□□ -0.04
LCN2-202ENST00000372998 NBPF8Q3BBV2 869 aa14.81□□□□□ -0.04
LCN2-202ENST00000372998 SMG6Q86US8 1419 aaKnown RBP14.81□□□□□ -0.04
LCN2-202ENST00000372998 USP47Q96K76 1375 aa14.8□□□□□ -0.04
LCN2-202ENST00000372998 TSPY4P0CV99 314 aa14.79□□□□□ -0.04
LCN2-202ENST00000372998 TSPY10P0CW01 314 aa14.79□□□□□ -0.04
LCN2-202ENST00000372998 ERCC6Q03468 1493 aa14.79□□□□□ -0.04
LCN2-202ENST00000372998 ABCC10Q5T3U5 1492 aa14.78□□□□□ -0.04
LCN2-202ENST00000372998 C9orf84Q5VXU9 1444 aa14.78□□□□□ -0.04
LCN2-202ENST00000372998 PLB1Q6P1J6 1458 aa14.76□□□□□ -0.05
LCN2-202ENST00000372998 PTPRGP23470 1445 aa14.76□□□□□ -0.05
LCN2-202ENST00000372998 KIF15Q9NS87 1388 aa14.76□□□□□ -0.05
LCN2-202ENST00000372998 ZNF644Q9H582 1327 aaPredicted RBP14.76□□□□□ -0.05
LCN2-202ENST00000372998 ERICH6Q7L0X2 663 aa14.76□□□□□ -0.05
LCN2-202ENST00000372998 LAMC1P11047 1609 aa14.76□□□□□ -0.05
LCN2-202ENST00000372998 PKD2Q13563 968 aa14.75□□□□□ -0.05
LCN2-202ENST00000372998 FAM9BQ8IZU0 186 aa14.75□□□□□ -0.05
LCN2-202ENST00000372998 JPH4Q96JJ6 628 aa14.75□□□□□ -0.05
LCN2-202ENST00000372998 MAST1Q9Y2H9 1570 aa14.75□□□□□ -0.05
LCN2-202ENST00000372998 C11orf95C9JLR9 678 aaPredicted RBP14.74□□□□□ -0.05
LCN2-202ENST00000372998 RALBP1Q15311 655 aa14.74□□□□□ -0.05
LCN2-202ENST00000372998 FOXD1Q16676 465 aa14.74□□□□□ -0.05
LCN2-202ENST00000372998 PLEKHH2Q8IVE3 1493 aa14.74□□□□□ -0.05
LCN2-202ENST00000372998 BRD4O60885 1362 aaPredicted RBP14.73□□□□□ -0.05
LCN2-202ENST00000372998 DHX29Q7Z478 1369 aaKnown RBP14.73□□□□□ -0.05
LCN2-202ENST00000372998 BCORL1Q5H9F3 1711 aa14.73□□□□□ -0.05
LCN2-202ENST00000372998 PREX2Q70Z35 1606 aa14.73□□□□□ -0.05
LCN2-202ENST00000372998 NUP155O75694 1391 aa14.73□□□□□ -0.05
LCN2-202ENST00000372998 INSRP06213 1382 aa14.73□□□□□ -0.05
LCN2-202ENST00000372998 CCDC141Q6ZP82 1450 aa14.72□□□□□ -0.05
LCN2-202ENST00000372998 NUDCQ9Y266 331 aa14.72□□□□□ -0.05
LCN2-202ENST00000372998 ZMYM4Q5VZL5 1548 aa14.71□□□□□ -0.05
LCN2-202ENST00000372998 E9PCH4 1651 aa14.71□□□□□ -0.05
LCN2-202ENST00000372998 ATP10BO94823 1461 aa14.71□□□□□ -0.05
LCN2-202ENST00000372998 EIF2AK4Q9P2K8 1649 aaKnown RBP14.71□□□□□ -0.05
LCN2-202ENST00000372998 RNF123Q5XPI4 1314 aa14.7□□□□□ -0.06
LCN2-202ENST00000372998 WASHC2CQ9Y4E1 1318 aa14.7□□□□□ -0.06
LCN2-202ENST00000372998 ARID3CA6NKF2 412 aa14.7□□□□□ -0.06
LCN2-202ENST00000372998 UNC13BO14795 1591 aa14.69□□□□□ -0.06
LCN2-202ENST00000372998 ZNF777Q9ULD5 760 aaPredicted RBP14.69□□□□□ -0.06
LCN2-202ENST00000372998 TMC1Q8TDI8 760 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms