RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 PCF11O94913 1555 aaKnown RBP13.69□□□□□ -0.22
KDM4A-201ENST00000372396 EFCAB2Q5VUJ9 269 aa13.68□□□□□ -0.22
KDM4A-201ENST00000372396 ZNF608Q9ULD9 1512 aaPredicted RBP13.68□□□□□ -0.22
KDM4A-201ENST00000372396 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.65□□□□□ -0.22
KDM4A-201ENST00000372396 PRG4Q92954 1404 aaPredicted RBP13.65□□□□□ -0.22
KDM4A-201ENST00000372396 MPHOSPH9Q99550 1183 aa13.65□□□□□ -0.22
KDM4A-201ENST00000372396 WDR62O43379 1518 aa13.63□□□□□ -0.23
KDM4A-201ENST00000372396 KDM2AQ9Y2K7 1162 aa13.63□□□□□ -0.23
KDM4A-201ENST00000372396 MIA2Q96PC5 1412 aa13.63□□□□□ -0.23
KDM4A-201ENST00000372396 CTTNBP2Q8WZ74 1663 aa13.62□□□□□ -0.23
KDM4A-201ENST00000372396 SUPT6HQ7KZ85 1726 aaKnown RBP13.62□□□□□ -0.23
KDM4A-201ENST00000372396 ESF1Q9H501 851 aaKnown RBP13.62□□□□□ -0.23
KDM4A-201ENST00000372396 EPRSP07814 1512 aaKnown RBP13.62□□□□□ -0.23
KDM4A-201ENST00000372396 ADAMTS12P58397 1594 aa13.61□□□□□ -0.23
KDM4A-201ENST00000372396 OSCARQ8IYS5 282 aa13.6□□□□□ -0.23
KDM4A-201ENST00000372396 ABCA5Q8WWZ7 1642 aa13.6□□□□□ -0.23
KDM4A-201ENST00000372396 CHGAP10645 457 aaKnown RBP13.6□□□□□ -0.23
KDM4A-201ENST00000372396 TROQ12816 1431 aaPredicted RBP13.6□□□□□ -0.23
KDM4A-201ENST00000372396 PLEKHG5O94827 1062 aa13.6□□□□□ -0.23
KDM4A-201ENST00000372396 THOC2Q8NI27 1593 aaKnown RBP13.59□□□□□ -0.23
KDM4A-201ENST00000372396 HNRNPMP52272 730 aaKnown RBP eCLIP13.59□□□□□ -0.232e-8■■■■■ 29.6
KDM4A-201ENST00000372396 WDR97A6NE52 1622 aa13.59□□□□□ -0.23
KDM4A-201ENST00000372396 KANK1Q14678 1352 aa13.58□□□□□ -0.23
KDM4A-201ENST00000372396 PKD2Q13563 968 aa13.58□□□□□ -0.23
KDM4A-201ENST00000372396 NUP155O75694 1391 aa13.58□□□□□ -0.24
KDM4A-201ENST00000372396 HIRIP3Q9BW71 556 aaPredicted RBP13.58□□□□□ -0.24
KDM4A-201ENST00000372396 PPP1R15AO75807 674 aaPredicted RBP13.58□□□□□ -0.24
KDM4A-201ENST00000372396 UACAQ9BZF9 1416 aa13.57□□□□□ -0.24
KDM4A-201ENST00000372396 CDK13Q14004 1512 aaKnown RBP13.54□□□□□ -0.24
KDM4A-201ENST00000372396 RGL3Q3MIN7 710 aa13.54□□□□□ -0.24
KDM4A-201ENST00000372396 STAG3Q9UJ98 1225 aa13.54□□□□□ -0.24
KDM4A-201ENST00000372396 UGGT2Q9NYU1 1516 aa13.53□□□□□ -0.24
KDM4A-201ENST00000372396 PBRM1Q86U86 1689 aa13.52□□□□□ -0.24
KDM4A-201ENST00000372396 CARD11Q9BXL7 1154 aa13.52□□□□□ -0.24
KDM4A-201ENST00000372396 HFM1A2PYH4 1435 aa13.52□□□□□ -0.24
KDM4A-201ENST00000372396 SPAG9O60271 1321 aaKnown RBP13.52□□□□□ -0.25
KDM4A-201ENST00000372396 FOXD1Q16676 465 aa13.52□□□□□ -0.25
KDM4A-201ENST00000372396 EIF4G3O43432 1585 aaKnown RBP13.51□□□□□ -0.25
KDM4A-201ENST00000372396 TARBP1Q13395 1621 aaKnown RBP13.51□□□□□ -0.25
KDM4A-201ENST00000372396 ZNF644Q9H582 1327 aaPredicted RBP13.51□□□□□ -0.25
KDM4A-201ENST00000372396 FANCIQ9NVI1 1328 aa13.51□□□□□ -0.25
KDM4A-201ENST00000372396 CFAP43Q8NDM7 1665 aa13.47□□□□□ -0.25
KDM4A-201ENST00000372396 PLB1Q6P1J6 1458 aa13.47□□□□□ -0.25
KDM4A-201ENST00000372396 DCAF11Q8TEB1 546 aa13.47□□□□□ -0.25
KDM4A-201ENST00000372396 NOP58Q9Y2X3 529 aaKnown RBP13.47□□□□□ -0.25
KDM4A-201ENST00000372396 L3MBTL2Q969R5 705 aa13.47□□□□□ -0.25
KDM4A-201ENST00000372396 ANP32AP39687 249 aaKnown RBP13.46□□□□□ -0.25
KDM4A-201ENST00000372396 VSIG10Q8N0Z9 540 aa13.46□□□□□ -0.25
KDM4A-201ENST00000372396 PTPN23Q9H3S7 1636 aa13.46□□□□□ -0.26
KDM4A-201ENST00000372396 PLEKHH2Q8IVE3 1493 aa13.45□□□□□ -0.26
KDM4A-201ENST00000372396 MSH5O43196 834 aa13.45□□□□□ -0.26
KDM4A-201ENST00000372396 HSPA5P11021 654 aaKnown RBP13.45□□□□□ -0.26
KDM4A-201ENST00000372396 CDCA8Q53HL2 280 aa13.45□□□□□ -0.26
KDM4A-201ENST00000372396 KIF15Q9NS87 1388 aa13.45□□□□□ -0.26
KDM4A-201ENST00000372396 DAPK1P53355 1430 aa13.45□□□□□ -0.26
KDM4A-201ENST00000372396 IL27Q8NEV9 243 aa13.45□□□□□ -0.26
KDM4A-201ENST00000372396 KIAA0556O60303 1618 aa13.45□□□□□ -0.26
KDM4A-201ENST00000372396 ANKRD50Q9ULJ7 1429 aa13.44□□□□□ -0.26
KDM4A-201ENST00000372396 HNRNPUQ00839 825 aaKnown RBP eCLIP13.44□□□□□ -0.26
KDM4A-201ENST00000372396 MRS2Q9HD23 443 aa13.44□□□□□ -0.26
KDM4A-201ENST00000372396 ROCK1Q13464 1354 aa13.44□□□□□ -0.26
KDM4A-201ENST00000372396 RAPGEF6Q8TEU7 1601 aa13.44□□□□□ -0.26
KDM4A-201ENST00000372396 ARHGAP5Q13017 1502 aa13.44□□□□□ -0.26
KDM4A-201ENST00000372396 SAMD9Q5K651 1589 aa13.43□□□□□ -0.26
KDM4A-201ENST00000372396 TMC1Q8TDI8 760 aa13.43□□□□□ -0.26
KDM4A-201ENST00000372396 NUP160Q12769 1436 aa13.42□□□□□ -0.26
KDM4A-201ENST00000372396 NAIPQ13075 1403 aa13.42□□□□□ -0.26
KDM4A-201ENST00000372396 FAM9BQ8IZU0 186 aa13.41□□□□□ -0.26
KDM4A-201ENST00000372396 KIF14Q15058 1648 aa13.41□□□□□ -0.26
KDM4A-201ENST00000372396 KIF3BO15066 747 aa13.41□□□□□ -0.26
KDM4A-201ENST00000372396 C9orf84Q5VXU9 1444 aa13.4□□□□□ -0.26
KDM4A-201ENST00000372396 ZBTB47Q9UFB7 747 aaPredicted RBP13.4□□□□□ -0.26
KDM4A-201ENST00000372396 CCER2I3L3R5 266 aa13.39□□□□□ -0.27
KDM4A-201ENST00000372396 CCDC144AA2RUR9 1427 aa13.39□□□□□ -0.27
KDM4A-201ENST00000372396 NUP153P49790 1475 aaKnown RBP13.39□□□□□ -0.27
KDM4A-201ENST00000372396 CAMSAP2Q08AD1 1489 aa13.37□□□□□ -0.27
KDM4A-201ENST00000372396 RSPH6AQ9H0K4 717 aa13.37□□□□□ -0.27
KDM4A-201ENST00000372396 GGT6Q6P531 493 aa13.37□□□□□ -0.27
KDM4A-201ENST00000372396 A0A0U1RQG5 324 aaPredicted RBP13.36□□□□□ -0.27
KDM4A-201ENST00000372396 AKNAQ7Z591 1439 aa13.36□□□□□ -0.27
KDM4A-201ENST00000372396 DISP1Q96F81 1524 aa13.36□□□□□ -0.27
KDM4A-201ENST00000372396 ROCK2O75116 1388 aaKnown RBP13.36□□□□□ -0.27
KDM4A-201ENST00000372396 ABCC5O15440 1437 aa13.35□□□□□ -0.27
KDM4A-201ENST00000372396 TMF1P82094 1093 aa13.35□□□□□ -0.27
KDM4A-201ENST00000372396 ARHGEF11O15085 1522 aa13.35□□□□□ -0.27
KDM4A-201ENST00000372396 NEFMP07197 916 aa13.34□□□□□ -0.27
KDM4A-201ENST00000372396 CYB5RLQ6IPT4 315 aa13.33□□□□□ -0.28
KDM4A-201ENST00000372396 ARID4BQ4LE39 1312 aaPredicted RBP13.32□□□□□ -0.28
KDM4A-201ENST00000372396 CCDC141Q6ZP82 1450 aa13.32□□□□□ -0.28
KDM4A-201ENST00000372396 TCOF1Q13428 1488 aaKnown RBP13.32□□□□□ -0.28
KDM4A-201ENST00000372396 ATP10BO94823 1461 aa13.32□□□□□ -0.28
KDM4A-201ENST00000372396 KIAA1107Q9UPP5 1409 aa13.31□□□□□ -0.28
KDM4A-201ENST00000372396 GPATCH8Q9UKJ3 1502 aaKnown RBP13.31□□□□□ -0.28
KDM4A-201ENST00000372396 KNSTRNQ9Y448 316 aa13.31□□□□□ -0.28
KDM4A-201ENST00000372396 ITSN2Q9NZM3 1697 aa13.3□□□□□ -0.28
KDM4A-201ENST00000372396 CEP170Q5SW79 1584 aa13.29□□□□□ -0.28
KDM4A-201ENST00000372396 WDR43Q15061 677 aaKnown RBP eCLIP13.29□□□□□ -0.28
KDM4A-201ENST00000372396 WASHC2CQ9Y4E1 1318 aa13.29□□□□□ -0.28
KDM4A-201ENST00000372396 ZMYND15Q9H091 742 aa13.28□□□□□ -0.28
KDM4A-201ENST00000372396 STAC3Q96MF2 364 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms