RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 OSCARQ8IYS5 282 aa9.66□□□□□ -0.86
TGFBR3-202ENST00000370399 PCF11O94913 1555 aaKnown RBP9.66□□□□□ -0.86
TGFBR3-202ENST00000370399 SPAG9O60271 1321 aaKnown RBP9.66□□□□□ -0.86
TGFBR3-202ENST00000370399 KIAA0586Q9BVV6 1533 aa9.64□□□□□ -0.87
TGFBR3-202ENST00000370399 ARID4BQ4LE39 1312 aaPredicted RBP9.64□□□□□ -0.87
TGFBR3-202ENST00000370399 CC2D1BQ5T0F9 858 aaKnown RBP9.64□□□□□ -0.87
TGFBR3-202ENST00000370399 AFAP1Q8N556 730 aa9.64□□□□□ -0.87
TGFBR3-202ENST00000370399 PLB1Q6P1J6 1458 aa9.64□□□□□ -0.87
TGFBR3-202ENST00000370399 SUPT16HQ9Y5B9 1047 aaKnown RBP9.63□□□□□ -0.87
TGFBR3-202ENST00000370399 UACAQ9BZF9 1416 aa9.63□□□□□ -0.87
TGFBR3-202ENST00000370399 RSPH4AQ5TD94 716 aa9.62□□□□□ -0.87
TGFBR3-202ENST00000370399 EPRSP07814 1512 aaKnown RBP9.62□□□□□ -0.87
TGFBR3-202ENST00000370399 SAFB2Q14151 953 aaKnown RBP eCLIP9.61□□□□□ -0.87
TGFBR3-202ENST00000370399 NUTM2DQ5VT03 806 aaPredicted RBP9.61□□□□□ -0.87
TGFBR3-202ENST00000370399 IQGAP2Q13576 1575 aa9.61□□□□□ -0.87
TGFBR3-202ENST00000370399 GRIN2AQ12879 1464 aa9.61□□□□□ -0.87
TGFBR3-202ENST00000370399 ST20-MTHFSA0A0A6YYL1 179 aa9.6□□□□□ -0.87
TGFBR3-202ENST00000370399 KIF15Q9NS87 1388 aa9.6□□□□□ -0.87
TGFBR3-202ENST00000370399 TNNT2P45379 298 aaPredicted RBP9.6□□□□□ -0.87
TGFBR3-202ENST00000370399 CUL7Q14999 1698 aa9.59□□□□□ -0.87
TGFBR3-202ENST00000370399 KNSTRNQ9Y448 316 aa9.59□□□□□ -0.87
TGFBR3-202ENST00000370399 ROCK2O75116 1388 aaKnown RBP9.59□□□□□ -0.87
TGFBR3-202ENST00000370399 BCL11AQ9H165 835 aa9.59□□□□□ -0.87
TGFBR3-202ENST00000370399 WDR43Q15061 677 aaKnown RBP eCLIP9.59□□□□□ -0.87
TGFBR3-202ENST00000370399 TROQ12816 1431 aaPredicted RBP9.59□□□□□ -0.88
TGFBR3-202ENST00000370399 ANKRD50Q9ULJ7 1429 aa9.59□□□□□ -0.88
TGFBR3-202ENST00000370399 NAIPQ13075 1403 aa9.58□□□□□ -0.88
TGFBR3-202ENST00000370399 KANK1Q14678 1352 aa9.58□□□□□ -0.88
TGFBR3-202ENST00000370399 SYNJ2O15056 1496 aa9.58□□□□□ -0.88
TGFBR3-202ENST00000370399 HFM1A2PYH4 1435 aa9.58□□□□□ -0.88
TGFBR3-202ENST00000370399 TRHP20396 242 aaPredicted RBP9.56□□□□□ -0.88
TGFBR3-202ENST00000370399 CANXP27824 592 aaKnown RBP9.56□□□□□ -0.88
TGFBR3-202ENST00000370399 EHBP1L1Q8N3D4 1523 aa9.56□□□□□ -0.88
TGFBR3-202ENST00000370399 CCER2I3L3R5 266 aa9.56□□□□□ -0.88
TGFBR3-202ENST00000370399 TMF1P82094 1093 aa9.56□□□□□ -0.88
TGFBR3-202ENST00000370399 NBPF8Q3BBV2 869 aa9.56□□□□□ -0.88
TGFBR3-202ENST00000370399 STK26Q9P289 416 aa9.56□□□□□ -0.88
TGFBR3-202ENST00000370399 PLEKHG5O94827 1062 aa9.55□□□□□ -0.88
TGFBR3-202ENST00000370399 PTPRKQ15262 1439 aa9.55□□□□□ -0.88
TGFBR3-202ENST00000370399 WASHC2CQ9Y4E1 1318 aa9.55□□□□□ -0.88
TGFBR3-202ENST00000370399 KIF21AQ7Z4S6 1674 aa9.55□□□□□ -0.88
TGFBR3-202ENST00000370399 SLC24A1O60721 1099 aa9.55□□□□□ -0.88
TGFBR3-202ENST00000370399 MIA2Q96PC5 1412 aa9.55□□□□□ -0.88
TGFBR3-202ENST00000370399 CCDC144AA2RUR9 1427 aa9.54□□□□□ -0.88
TGFBR3-202ENST00000370399 NEUROD2Q15784 382 aa9.54□□□□□ -0.88
TGFBR3-202ENST00000370399 MAGI1Q96QZ7 1491 aaPredicted RBP9.53□□□□□ -0.88
TGFBR3-202ENST00000370399 HECW1Q76N89 1606 aa9.53□□□□□ -0.88
TGFBR3-202ENST00000370399 ARHGEF11O15085 1522 aa9.53□□□□□ -0.88
TGFBR3-202ENST00000370399 CCDC136Q96JN2 1154 aa9.53□□□□□ -0.88
TGFBR3-202ENST00000370399 DAPK1P53355 1430 aa9.53□□□□□ -0.88
TGFBR3-202ENST00000370399 CDCA8Q53HL2 280 aa9.53□□□□□ -0.88
TGFBR3-202ENST00000370399 MAP3K1Q13233 1512 aa9.53□□□□□ -0.88
TGFBR3-202ENST00000370399 PPM1GO15355 546 aaPredicted RBP9.52□□□□□ -0.88
TGFBR3-202ENST00000370399 POGKQ9P215 609 aa9.52□□□□□ -0.88
TGFBR3-202ENST00000370399 WASHC2AQ641Q2 1341 aa9.52□□□□□ -0.89
TGFBR3-202ENST00000370399 NEFMP07197 916 aa9.52□□□□□ -0.89
TGFBR3-202ENST00000370399 USP47Q96K76 1375 aa9.52□□□□□ -0.89
TGFBR3-202ENST00000370399 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.52□□□□□ -0.89
TGFBR3-202ENST00000370399 WDR97A6NE52 1622 aa9.51□□□□□ -0.89
TGFBR3-202ENST00000370399 THOC2Q8NI27 1593 aaKnown RBP9.51□□□□□ -0.89
TGFBR3-202ENST00000370399 ARHGAP5Q13017 1502 aa9.51□□□□□ -0.89
TGFBR3-202ENST00000370399 SUPT6HQ7KZ85 1726 aaKnown RBP9.51□□□□□ -0.89
TGFBR3-202ENST00000370399 PRKRIP1Q9H875 184 aaPredicted RBP9.51□□□□□ -0.89
TGFBR3-202ENST00000370399 C9orf84Q5VXU9 1444 aa9.51□□□□□ -0.89
TGFBR3-202ENST00000370399 DAXXQ9UER7 740 aaPredicted RBP9.5□□□□□ -0.89
TGFBR3-202ENST00000370399 TRAK1Q9UPV9 953 aa9.5□□□□□ -0.89
TGFBR3-202ENST00000370399 ABCC5O15440 1437 aa9.5□□□□□ -0.89
TGFBR3-202ENST00000370399 MYT1Q01538 1121 aa9.5□□□□□ -0.89
TGFBR3-202ENST00000370399 NBPF1Q3BBV0 1214 aa9.5□□□□□ -0.89
TGFBR3-202ENST00000370399 FAM69CQ0P6D2 419 aa9.49□□□□□ -0.89
TGFBR3-202ENST00000370399 KIF7Q2M1P5 1343 aa9.49□□□□□ -0.89
TGFBR3-202ENST00000370399 SRPK2P78362 688 aaKnown RBP9.48□□□□□ -0.89
TGFBR3-202ENST00000370399 RAPGEF3O95398 923 aa9.48□□□□□ -0.89
TGFBR3-202ENST00000370399 NPM2Q86SE8 214 aaKnown RBP9.48□□□□□ -0.89
TGFBR3-202ENST00000370399 B4GALNT3Q6L9W6 998 aa9.47□□□□□ -0.89
TGFBR3-202ENST00000370399 NUP153P49790 1475 aaKnown RBP9.47□□□□□ -0.89
TGFBR3-202ENST00000370399 PTPN23Q9H3S7 1636 aa9.47□□□□□ -0.89
TGFBR3-202ENST00000370399 PANK3Q9H999 370 aa9.47□□□□□ -0.89
TGFBR3-202ENST00000370399 SCAPERQ9BY12 1400 aa9.47□□□□□ -0.89
TGFBR3-202ENST00000370399 C11orf95C9JLR9 678 aaPredicted RBP9.46□□□□□ -0.9
TGFBR3-202ENST00000370399 NCOA1Q15788 1441 aa9.45□□□□□ -0.9
TGFBR3-202ENST00000370399 CCDC7Q96M83 1385 aa9.45□□□□□ -0.9
TGFBR3-202ENST00000370399 ATP10BO94823 1461 aa9.45□□□□□ -0.9
TGFBR3-202ENST00000370399 CAMSAP2Q08AD1 1489 aa9.45□□□□□ -0.9
TGFBR3-202ENST00000370399 ADAMTS12P58397 1594 aa9.44□□□□□ -0.9
TGFBR3-202ENST00000370399 KTN1Q86UP2 1357 aaKnown RBP9.44□□□□□ -0.9
TGFBR3-202ENST00000370399 SOX12O15370 315 aa9.44□□□□□ -0.9
TGFBR3-202ENST00000370399 CCDC184Q52MB2 194 aa9.44□□□□□ -0.9
TGFBR3-202ENST00000370399 C14orf37Q86TY3 774 aa9.44□□□□□ -0.9
TGFBR3-202ENST00000370399 KIAA1107Q9UPP5 1409 aa9.44□□□□□ -0.9
TGFBR3-202ENST00000370399 GPATCH8Q9UKJ3 1502 aaKnown RBP9.43□□□□□ -0.9
TGFBR3-202ENST00000370399 U2SURPO15042 1029 aaKnown RBP9.43□□□□□ -0.9
TGFBR3-202ENST00000370399 ANKRD30BQ9BXX2 1392 aa9.43□□□□□ -0.9
TGFBR3-202ENST00000370399 TMEM132EQ6IEE7 984 aa9.43□□□□□ -0.9
TGFBR3-202ENST00000370399 CFAP70Q5T0N1 1121 aa9.43□□□□□ -0.9
TGFBR3-202ENST00000370399 MORC1Q86VD1 984 aa9.43□□□□□ -0.9
TGFBR3-202ENST00000370399 ABCA5Q8WWZ7 1642 aa9.42□□□□□ -0.9
TGFBR3-202ENST00000370399 EIF4G3O43432 1585 aaKnown RBP9.42□□□□□ -0.9
TGFBR3-202ENST00000370399 ROCK1Q13464 1354 aa9.42□□□□□ -0.9
TGFBR3-202ENST00000370399 NUTM2FA1L443 756 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms