RNA–Protein interactions for RNA: ENST00000370056.8

VAV3-202, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAV3, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-202ENST00000370056 LAS1LQ9Y4W2 734 aaKnown RBP27.94■■■□□ 2.06
VAV3-202ENST00000370056 ZBTB7CA1YPR0 619 aa27.93■■■□□ 2.06
VAV3-202ENST00000370056 FANCD2Q9BXW9 1451 aa27.92■■■□□ 2.06
VAV3-202ENST00000370056 MORC1Q86VD1 984 aa27.91■■■□□ 2.06
VAV3-202ENST00000370056 RSPH4AQ5TD94 716 aa27.89■■■□□ 2.06
VAV3-202ENST00000370056 CASC1Q6TDU7 716 aa27.88■■■□□ 2.05
VAV3-202ENST00000370056 RCAN3Q9UKA8 241 aa27.85■■■□□ 2.05
VAV3-202ENST00000370056 IGF1RP08069 1367 aa27.85■■■□□ 2.05
VAV3-202ENST00000370056 NCLP19338 710 aaKnown RBP27.83■■■□□ 2.05
VAV3-202ENST00000370056 SRPK2P78362 688 aaKnown RBP27.83■■■□□ 2.05
VAV3-202ENST00000370056 HNRNPMP52272 730 aaKnown RBP eCLIP27.82■■■□□ 2.04
VAV3-202ENST00000370056 PLEKHG5O94827 1062 aa27.81■■■□□ 2.04
VAV3-202ENST00000370056 GGT6Q6P531 493 aa27.81■■■□□ 2.04
VAV3-202ENST00000370056 TRIM44Q96DX7 344 aaPredicted RBP27.8■■■□□ 2.04
VAV3-202ENST00000370056 JPH4Q96JJ6 628 aa27.79■■■□□ 2.04
VAV3-202ENST00000370056 GLIPR1L2Q4G1C9 344 aa27.78■■■□□ 2.04
VAV3-202ENST00000370056 NLRP13Q86W25 1043 aa27.77■■■□□ 2.04
VAV3-202ENST00000370056 FGD5Q6ZNL6 1462 aa27.76■■■□□ 2.03
VAV3-202ENST00000370056 KIF21BO75037 1637 aa27.76■■■□□ 2.03
VAV3-202ENST00000370056 TSHZ2Q9NRE2 1034 aa27.75■■■□□ 2.03
VAV3-202ENST00000370056 HDGFP51858 240 aaKnown RBP27.74■■■□□ 2.03
VAV3-202ENST00000370056 EIF3AQ14152 1382 aaKnown RBP27.73■■■□□ 2.03
VAV3-202ENST00000370056 SAFB2Q14151 953 aaKnown RBP eCLIP27.72■■■□□ 2.03
VAV3-202ENST00000370056 TCERG1O14776 1098 aaKnown RBP27.7■■■□□ 2.02
VAV3-202ENST00000370056 PDE3BQ13370 1112 aa27.69■■■□□ 2.02
VAV3-202ENST00000370056 KIF3BO15066 747 aa27.68■■■□□ 2.02
VAV3-202ENST00000370056 NCAPD3P42695 1498 aa27.67■■■□□ 2.02
VAV3-202ENST00000370056 SPAG9O60271 1321 aaKnown RBP27.66■■■□□ 2.02
VAV3-202ENST00000370056 HDGFL2Q7Z4V5 671 aaPredicted RBP27.66■■■□□ 2.02
VAV3-202ENST00000370056 KIF15Q9NS87 1388 aa27.66■■■□□ 2.02
VAV3-202ENST00000370056 PRKRIP1Q9H875 184 aaPredicted RBP27.65■■■□□ 2.02
VAV3-202ENST00000370056 STK26Q9P289 416 aa27.65■■■□□ 2.02
VAV3-202ENST00000370056 HAP1P54257 671 aaPredicted RBP27.64■■■□□ 2.01
VAV3-202ENST00000370056 PHLDB1Q86UU1 1377 aa27.64■■■□□ 2.01
VAV3-202ENST00000370056 FGD6Q6ZV73 1430 aa27.63■■■□□ 2.01
VAV3-202ENST00000370056 GAPVD1Q14C86 1478 aa27.63■■■□□ 2.01
VAV3-202ENST00000370056 ST20-MTHFSA0A0A6YYL1 179 aa27.62■■■□□ 2.01
VAV3-202ENST00000370056 HSP90AB1P08238 724 aaKnown RBP27.62■■■□□ 2.01
VAV3-202ENST00000370056 U2AF1L5P0DN76 240 aaPredicted RBP27.62■■■□□ 2.01
VAV3-202ENST00000370056 U2AF1Q01081 240 aaKnown RBP eCLIP27.62■■■□□ 2.01
VAV3-202ENST00000370056 CCDC144AA2RUR9 1427 aa27.61■■■□□ 2.01
VAV3-202ENST00000370056 IPO8O15397 1037 aaKnown RBP27.6■■■□□ 2.01
VAV3-202ENST00000370056 MLECQ14165 292 aa27.6■■■□□ 2.01
VAV3-202ENST00000370056 MYBBP1AQ9BQG0 1328 aaKnown RBP27.6■■■□□ 2.01
VAV3-202ENST00000370056 GOLGA2Q08379 1002 aa27.6■■■□□ 2.01
VAV3-202ENST00000370056 A0A0G2JS52 829 aa27.59■■■□□ 2.01
VAV3-202ENST00000370056 LRRC9Q6ZRR7 1453 aa27.58■■■□□ 2.01
VAV3-202ENST00000370056 RAD54L2Q9Y4B4 1467 aa27.58■■■□□ 2.01
VAV3-202ENST00000370056 HSCBQ8IWL3 235 aa27.58■■■□□ 2
VAV3-202ENST00000370056 MYOM3Q5VTT5 1437 aa27.57■■■□□ 2
VAV3-202ENST00000370056 ERICH3Q5RHP9 1530 aa27.57■■■□□ 2
VAV3-202ENST00000370056 LMOD2Q6P5Q4 547 aa27.55■■■□□ 2
VAV3-202ENST00000370056 CUX1P39880 1505 aa27.54■■■□□ 2
VAV3-202ENST00000370056 USP47Q96K76 1375 aa27.54■■■□□ 2
VAV3-202ENST00000370056 RWDD1Q9H446 243 aaPredicted RBP27.53■■■□□ 2
VAV3-202ENST00000370056 CALD1Q05682 793 aaKnown RBP27.53■■■□□ 2
VAV3-202ENST00000370056 UACAQ9BZF9 1416 aa27.53■■■□□ 2
VAV3-202ENST00000370056 ZBED9Q6R2W3 1325 aa27.52■■■□□ 2
VAV3-202ENST00000370056 CFAP44Q96MT7 982 aa27.51■■□□□ 1.99
VAV3-202ENST00000370056 PTPRGP23470 1445 aa27.5■■□□□ 1.99
VAV3-202ENST00000370056 PTMAP06454 111 aaKnown RBP27.5■■□□□ 1.99
VAV3-202ENST00000370056 DEKP35659 375 aaKnown RBP27.5■■□□□ 1.99
VAV3-202ENST00000370056 SYNJ1O43426 1573 aa27.49■■□□□ 1.99
VAV3-202ENST00000370056 OS9Q13438 667 aaPredicted RBP27.49■■□□□ 1.99
VAV3-202ENST00000370056 CASKIN1Q8WXD9 1431 aa27.48■■□□□ 1.99
VAV3-202ENST00000370056 SOX12O15370 315 aa27.48■■□□□ 1.99
VAV3-202ENST00000370056 ARAP1Q96P48 1450 aa27.47■■□□□ 1.99
VAV3-202ENST00000370056 PANK3Q9H999 370 aa27.47■■□□□ 1.99
VAV3-202ENST00000370056 TERF2IPQ9NYB0 399 aa27.46■■□□□ 1.99
VAV3-202ENST00000370056 PMFBP1Q8TBY8 1022 aa27.45■■□□□ 1.99
VAV3-202ENST00000370056 RTF1Q92541 710 aaKnown RBP27.45■■□□□ 1.99
VAV3-202ENST00000370056 RRBP1Q9P2E9 1410 aaKnown RBP27.45■■□□□ 1.99
VAV3-202ENST00000370056 WASHC2CQ9Y4E1 1318 aa27.43■■□□□ 1.98
VAV3-202ENST00000370056 ITPRIPQ8IWB1 547 aa27.43■■□□□ 1.98
VAV3-202ENST00000370056 CCDC146Q8IYE0 955 aa27.43■■□□□ 1.98
VAV3-202ENST00000370056 IPO9Q96P70 1041 aaKnown RBP27.43■■□□□ 1.98
VAV3-202ENST00000370056 ZRSR1Q15695 479 aaKnown RBP27.41■■□□□ 1.98
VAV3-202ENST00000370056 CENPJQ9HC77 1338 aaPredicted RBP27.41■■□□□ 1.98
VAV3-202ENST00000370056 CFTRP13569 1480 aa27.41■■□□□ 1.98
VAV3-202ENST00000370056 FYCO1Q9BQS8 1478 aa27.39■■□□□ 1.97
VAV3-202ENST00000370056 NCOA2Q15596 1464 aa27.38■■□□□ 1.97
VAV3-202ENST00000370056 PRXQ9BXM0 1461 aa27.37■■□□□ 1.97
VAV3-202ENST00000370056 L1TD1Q5T7N2 865 aaKnown RBP27.37■■□□□ 1.97
VAV3-202ENST00000370056 SMC4Q9NTJ3 1288 aa27.37■■□□□ 1.97
VAV3-202ENST00000370056 MCCP23508 829 aa27.37■■□□□ 1.97
VAV3-202ENST00000370056 RTN4Q9NQC3 1192 aaKnown RBP27.37■■□□□ 1.97
VAV3-202ENST00000370056 KCNJ4P48050 445 aa27.36■■□□□ 1.97
VAV3-202ENST00000370056 CCDC7Q96M83 1385 aa27.36■■□□□ 1.97
VAV3-202ENST00000370056 TRAK1Q9UPV9 953 aa27.35■■□□□ 1.97
VAV3-202ENST00000370056 TPRNQ4KMQ1 711 aa27.35■■□□□ 1.97
VAV3-202ENST00000370056 ZNF644Q9H582 1327 aaPredicted RBP27.34■■□□□ 1.97
VAV3-202ENST00000370056 SPRYD3Q8NCJ5 442 aa27.34■■□□□ 1.97
VAV3-202ENST00000370056 RRP1P56182 461 aaKnown RBP27.31■■□□□ 1.96
VAV3-202ENST00000370056 KIF7Q2M1P5 1343 aa27.3■■□□□ 1.96
VAV3-202ENST00000370056 DNTTIP2Q5QJE6 756 aaKnown RBP27.3■■□□□ 1.96
VAV3-202ENST00000370056 FGD1P98174 961 aa27.3■■□□□ 1.96
VAV3-202ENST00000370056 CLUAP1Q96AJ1 413 aa27.29■■□□□ 1.96
VAV3-202ENST00000370056 TOP2BQ02880 1626 aa27.29■■□□□ 1.96
VAV3-202ENST00000370056 NUTM2DQ5VT03 806 aaPredicted RBP27.28■■□□□ 1.96
VAV3-202ENST00000370056 CNTLNQ9NXG0 1405 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms