RNA–Protein interactions for RNA: ENST00000369754.7

FAM46A-202, Transcript of Putative nucleotidyltransferase FAM46A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM46A, Length 5,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM46A-202ENST00000369754 MAPK8IP3Q9UPT6 1336 aa16.61■□□□□ 0.25
FAM46A-202ENST00000369754 TMF1P82094 1093 aa16.6■□□□□ 0.25
FAM46A-202ENST00000369754 VPS8Q8N3P4 1428 aa16.59■□□□□ 0.25
FAM46A-202ENST00000369754 CC2D1BQ5T0F9 858 aaKnown RBP16.59■□□□□ 0.25
FAM46A-202ENST00000369754 HDGFL2Q7Z4V5 671 aaPredicted RBP16.59■□□□□ 0.25
FAM46A-202ENST00000369754 SENP3-EIF4A1A0A087X0R7 540 aa16.59■□□□□ 0.25
FAM46A-202ENST00000369754 NGDNQ8NEJ9 315 aaKnown RBP16.59■□□□□ 0.25
FAM46A-202ENST00000369754 HMGXB3Q12766 1538 aa16.57■□□□□ 0.24
FAM46A-202ENST00000369754 PRDM2Q13029 1718 aa16.57■□□□□ 0.24
FAM46A-202ENST00000369754 PHF23Q9BUL5 403 aaPredicted RBP16.56■□□□□ 0.24
FAM46A-202ENST00000369754 IGF1RP08069 1367 aa16.55■□□□□ 0.24
FAM46A-202ENST00000369754 MYH16Q9H6N6 1097 aa16.55■□□□□ 0.24
FAM46A-202ENST00000369754 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.55■□□□□ 0.24
FAM46A-202ENST00000369754 CFTRP13569 1480 aa16.54■□□□□ 0.24
FAM46A-202ENST00000369754 SNAPC4Q5SXM2 1469 aa16.53■□□□□ 0.24
FAM46A-202ENST00000369754 RUSC2Q8N2Y8 1516 aa16.53■□□□□ 0.24
FAM46A-202ENST00000369754 MPHOSPH9Q99550 1183 aa16.51■□□□□ 0.23
FAM46A-202ENST00000369754 ZNF330Q9Y3S2 320 aaPredicted RBP16.5■□□□□ 0.23
FAM46A-202ENST00000369754 MORC1Q86VD1 984 aa16.5■□□□□ 0.23
FAM46A-202ENST00000369754 SETD5Q9C0A6 1442 aa16.48■□□□□ 0.23
FAM46A-202ENST00000369754 TOPBP1Q92547 1522 aa16.47■□□□□ 0.23
FAM46A-202ENST00000369754 EVA1CP58658 441 aa16.46■□□□□ 0.23
FAM46A-202ENST00000369754 ROCK2O75116 1388 aaKnown RBP16.46■□□□□ 0.22
FAM46A-202ENST00000369754 TRAK1Q9UPV9 953 aa16.44■□□□□ 0.22
FAM46A-202ENST00000369754 RTF1Q92541 710 aaKnown RBP16.44■□□□□ 0.22
FAM46A-202ENST00000369754 LTV1Q96GA3 475 aaPredicted RBP16.43■□□□□ 0.22
FAM46A-202ENST00000369754 PNNQ9H307 717 aaKnown RBP16.43■□□□□ 0.22
FAM46A-202ENST00000369754 ATF3P18847 181 aa16.42■□□□□ 0.22
FAM46A-202ENST00000369754 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.41■□□□□ 0.22
FAM46A-202ENST00000369754 SYNJ2O15056 1496 aa16.4■□□□□ 0.22
FAM46A-202ENST00000369754 VGFO15240 615 aaPredicted RBP16.4■□□□□ 0.22
FAM46A-202ENST00000369754 HSP90AA1P07900 732 aaKnown RBP16.4■□□□□ 0.22
FAM46A-202ENST00000369754 AFAP1Q8N556 730 aa16.39■□□□□ 0.21
FAM46A-202ENST00000369754 POLA1P09884 1462 aaPredicted RBP16.39■□□□□ 0.21
FAM46A-202ENST00000369754 ARHGAP5Q13017 1502 aa16.39■□□□□ 0.21
FAM46A-202ENST00000369754 EIF3AQ14152 1382 aaKnown RBP16.39■□□□□ 0.21
FAM46A-202ENST00000369754 AMPHP49418 695 aa16.38■□□□□ 0.21
FAM46A-202ENST00000369754 GOLGA2Q08379 1002 aa16.38■□□□□ 0.21
FAM46A-202ENST00000369754 LAMC3Q9Y6N6 1575 aa16.38■□□□□ 0.21
FAM46A-202ENST00000369754 RTL5Q5HYW3 569 aaPredicted RBP16.38■□□□□ 0.21
FAM46A-202ENST00000369754 UNC13AQ9UPW8 1703 aa16.37■□□□□ 0.21
FAM46A-202ENST00000369754 TERF2IPQ9NYB0 399 aa16.37■□□□□ 0.21
FAM46A-202ENST00000369754 MSH5O43196 834 aa16.37■□□□□ 0.21
FAM46A-202ENST00000369754 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.36■□□□□ 0.21
FAM46A-202ENST00000369754 RAPGEF3O95398 923 aa16.36■□□□□ 0.21
FAM46A-202ENST00000369754 PIP4K2BP78356 416 aa16.35■□□□□ 0.21
FAM46A-202ENST00000369754 PSME1Q06323 249 aa16.35■□□□□ 0.21
FAM46A-202ENST00000369754 TMX4Q9H1E5 349 aaPredicted RBP16.35■□□□□ 0.21
FAM46A-202ENST00000369754 FTSJ3Q8IY81 847 aaKnown RBP16.34■□□□□ 0.21
FAM46A-202ENST00000369754 UPF2Q9HAU5 1272 aaKnown RBP16.34■□□□□ 0.21
FAM46A-202ENST00000369754 ZNF644Q9H582 1327 aaPredicted RBP16.34■□□□□ 0.21
FAM46A-202ENST00000369754 OS9Q13438 667 aaPredicted RBP16.33■□□□□ 0.2
FAM46A-202ENST00000369754 DNMBPQ6XZF7 1577 aa16.32■□□□□ 0.2
FAM46A-202ENST00000369754 CCDC144AA2RUR9 1427 aa16.32■□□□□ 0.2
FAM46A-202ENST00000369754 MINK1Q8N4C8 1332 aaPredicted RBP16.32■□□□□ 0.2
FAM46A-202ENST00000369754 RAB3GAP2Q9H2M9 1393 aa16.31■□□□□ 0.2
FAM46A-202ENST00000369754 PROSER2Q86WR7 435 aaPredicted RBP16.3■□□□□ 0.2
FAM46A-202ENST00000369754 FKBP8Q14318 412 aa16.3■□□□□ 0.2
FAM46A-202ENST00000369754 TXNDC2Q86VQ3 553 aa16.3■□□□□ 0.2
FAM46A-202ENST00000369754 UACAQ9BZF9 1416 aa16.29■□□□□ 0.2
FAM46A-202ENST00000369754 POGZQ7Z3K3 1410 aa16.28■□□□□ 0.2
FAM46A-202ENST00000369754 HSPA5P11021 654 aaKnown RBP16.28■□□□□ 0.2
FAM46A-202ENST00000369754 FRAT1Q92837 279 aaPredicted RBP16.27■□□□□ 0.2
FAM46A-202ENST00000369754 CCDC136Q96JN2 1154 aa16.27■□□□□ 0.19
FAM46A-202ENST00000369754 GTF3C3Q9Y5Q9 886 aa16.27■□□□□ 0.19
FAM46A-202ENST00000369754 KLHL34Q8N239 644 aa16.26■□□□□ 0.19
FAM46A-202ENST00000369754 U2AF1L5P0DN76 240 aaPredicted RBP16.26■□□□□ 0.19
FAM46A-202ENST00000369754 U2AF1Q01081 240 aaKnown RBP eCLIP16.26■□□□□ 0.19
FAM46A-202ENST00000369754 CUX1P39880 1505 aa16.25■□□□□ 0.19
FAM46A-202ENST00000369754 NUTM2BA6NNL0 878 aaPredicted RBP16.25■□□□□ 0.19
FAM46A-202ENST00000369754 NUTM2EB1AL46 878 aaPredicted RBP16.25■□□□□ 0.19
FAM46A-202ENST00000369754 NUTM2AQ8IVF1 878 aaPredicted RBP16.25■□□□□ 0.19
FAM46A-202ENST00000369754 SYTL4Q96C24 671 aaPredicted RBP16.24■□□□□ 0.19
FAM46A-202ENST00000369754 THEMISQ8N1K5 641 aaPredicted RBP16.24■□□□□ 0.19
FAM46A-202ENST00000369754 KIF15Q9NS87 1388 aa16.24■□□□□ 0.19
FAM46A-202ENST00000369754 IRX6P78412 446 aaPredicted RBP16.24■□□□□ 0.19
FAM46A-202ENST00000369754 SCAPERQ9BY12 1400 aa16.23■□□□□ 0.19
FAM46A-202ENST00000369754 MYOM3Q5VTT5 1437 aa16.22■□□□□ 0.19
FAM46A-202ENST00000369754 SYNJ1O43426 1573 aa16.22■□□□□ 0.19
FAM46A-202ENST00000369754 L3MBTL2Q969R5 705 aa16.21■□□□□ 0.19
FAM46A-202ENST00000369754 G3V3G9 751 aa16.21■□□□□ 0.19
FAM46A-202ENST00000369754 DCAF8Q5TAQ9 597 aa16.21■□□□□ 0.19
FAM46A-202ENST00000369754 GTF2E1P29083 439 aaPredicted RBP16.2■□□□□ 0.18
FAM46A-202ENST00000369754 COG3Q96JB2 828 aa16.2■□□□□ 0.18
FAM46A-202ENST00000369754 ANKLE2Q86XL3 938 aa16.2■□□□□ 0.18
FAM46A-202ENST00000369754 TAOK2Q9UL54 1235 aa16.19■□□□□ 0.18
FAM46A-202ENST00000369754 EVC2Q86UK5 1308 aa16.19■□□□□ 0.18
FAM46A-202ENST00000369754 ESCO1Q5FWF5 840 aa16.18■□□□□ 0.18
FAM46A-202ENST00000369754 MIER1Q8N108 512 aa16.18■□□□□ 0.18
FAM46A-202ENST00000369754 ANP32AP39687 249 aaKnown RBP16.18■□□□□ 0.18
FAM46A-202ENST00000369754 NUTM2GQ5VZR2 741 aa16.18■□□□□ 0.18
FAM46A-202ENST00000369754 KTN1Q86UP2 1357 aaKnown RBP16.17■□□□□ 0.18
FAM46A-202ENST00000369754 CD109Q6YHK3 1445 aa16.17■□□□□ 0.18
FAM46A-202ENST00000369754 DCAF8L1A6NGE4 600 aa16.16■□□□□ 0.18
FAM46A-202ENST00000369754 TULP1O00294 542 aaPredicted RBP16.16■□□□□ 0.18
FAM46A-202ENST00000369754 C1orf141Q5JVX7 400 aa16.15■□□□□ 0.18
FAM46A-202ENST00000369754 ISY1Q9ULR0 285 aaKnown RBP16.15■□□□□ 0.18
FAM46A-202ENST00000369754 TOP2BQ02880 1626 aa16.15■□□□□ 0.18
FAM46A-202ENST00000369754 TIMELESSQ9UNS1 1208 aa16.14■□□□□ 0.18
FAM46A-202ENST00000369754 SF3B2Q13435 895 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms