RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 RRP7BPQ9NSQ0 103 aa25.01■■□□□ 1.59
PRDM1-202ENST00000369091 FOXD1Q16676 465 aa25■■□□□ 1.59
PRDM1-202ENST00000369091 NBPF8Q3BBV2 869 aa24.99■■□□□ 1.59
PRDM1-202ENST00000369091 FYCO1Q9BQS8 1478 aa24.99■■□□□ 1.59
PRDM1-202ENST00000369091 RRP1P56182 461 aaKnown RBP24.98■■□□□ 1.59
PRDM1-202ENST00000369091 POLR3GLQ9BT43 218 aa24.96■■□□□ 1.59
PRDM1-202ENST00000369091 CHIC2Q9UKJ5 165 aa24.96■■□□□ 1.59
PRDM1-202ENST00000369091 DHX29Q7Z478 1369 aaKnown RBP24.94■■□□□ 1.58
PRDM1-202ENST00000369091 CASKIN1Q8WXD9 1431 aa24.94■■□□□ 1.58
PRDM1-202ENST00000369091 MS4A1P11836 297 aa24.93■■□□□ 1.58
PRDM1-202ENST00000369091 MTUS2Q5JR59 1369 aa24.92■■□□□ 1.58
PRDM1-202ENST00000369091 PKNOX2Q96KN3 472 aa24.91■■□□□ 1.58
PRDM1-202ENST00000369091 RSPH6AQ9H0K4 717 aa24.91■■□□□ 1.58
PRDM1-202ENST00000369091 DDRGK1Q96HY6 314 aa24.9■■□□□ 1.58
PRDM1-202ENST00000369091 ABCA5Q8WWZ7 1642 aa24.9■■□□□ 1.58
PRDM1-202ENST00000369091 FGD5Q6ZNL6 1462 aa24.89■■□□□ 1.58
PRDM1-202ENST00000369091 PNISRQ8TF01 805 aaKnown RBP24.88■■□□□ 1.57
PRDM1-202ENST00000369091 SPATA31E1Q6ZUB1 1445 aa24.88■■□□□ 1.57
PRDM1-202ENST00000369091 DCAF11Q8TEB1 546 aa24.88■■□□□ 1.57
PRDM1-202ENST00000369091 KDM6BO15054 1643 aa24.86■■□□□ 1.57
PRDM1-202ENST00000369091 HECW1Q76N89 1606 aa24.86■■□□□ 1.57
PRDM1-202ENST00000369091 MPHOSPH9Q99550 1183 aa24.85■■□□□ 1.57
PRDM1-202ENST00000369091 FAM43AQ8N2R8 423 aa24.84■■□□□ 1.57
PRDM1-202ENST00000369091 RCAN3Q9UKA8 241 aa24.84■■□□□ 1.57
PRDM1-202ENST00000369091 MYOM3Q5VTT5 1437 aa24.83■■□□□ 1.57
PRDM1-202ENST00000369091 TMC1Q8TDI8 760 aa24.82■■□□□ 1.56
PRDM1-202ENST00000369091 POLR1AO95602 1720 aaPredicted RBP24.81■■□□□ 1.56
PRDM1-202ENST00000369091 FRAT2O75474 233 aaPredicted RBP24.81■■□□□ 1.56
PRDM1-202ENST00000369091 DAXXQ9UER7 740 aaPredicted RBP24.78■■□□□ 1.56
PRDM1-202ENST00000369091 PLIN1O60240 522 aa24.77■■□□□ 1.56
PRDM1-202ENST00000369091 TEX14Q8IWB6 1497 aa24.75■■□□□ 1.55
PRDM1-202ENST00000369091 HMGXB3Q12766 1538 aa24.74■■□□□ 1.55
PRDM1-202ENST00000369091 SNAPC4Q5SXM2 1469 aa24.74■■□□□ 1.55
PRDM1-202ENST00000369091 CFTRP13569 1480 aa24.73■■□□□ 1.55
PRDM1-202ENST00000369091 GCC2Q8IWJ2 1684 aa24.72■■□□□ 1.55
PRDM1-202ENST00000369091 EFCAB5A4FU69 1503 aa24.71■■□□□ 1.55
PRDM1-202ENST00000369091 BCORL1Q5H9F3 1711 aa24.71■■□□□ 1.55
PRDM1-202ENST00000369091 RPRD2Q5VT52 1461 aaKnown RBP24.7■■□□□ 1.54
PRDM1-202ENST00000369091 LRPPRCP42704 1394 aaKnown RBP24.69■■□□□ 1.54
PRDM1-202ENST00000369091 CRBNQ96SW2 442 aa24.69■■□□□ 1.54
PRDM1-202ENST00000369091 RRAGDQ9NQL2 400 aaPredicted RBP24.69■■□□□ 1.54
PRDM1-202ENST00000369091 LRRIQ1Q96JM4 1722 aa24.68■■□□□ 1.54
PRDM1-202ENST00000369091 ANKRD30BQ9BXX2 1392 aa24.68■■□□□ 1.54
PRDM1-202ENST00000369091 CDCA7LQ96GN5 454 aa24.67■■□□□ 1.54
PRDM1-202ENST00000369091 ZNF326Q5BKZ1 582 aaKnown RBP24.66■■□□□ 1.54
PRDM1-202ENST00000369091 USP47Q96K76 1375 aa24.64■■□□□ 1.54
PRDM1-202ENST00000369091 MIA2Q96PC5 1412 aa24.64■■□□□ 1.53
PRDM1-202ENST00000369091 SUPT6HQ7KZ85 1726 aaKnown RBP24.63■■□□□ 1.53
PRDM1-202ENST00000369091 VSIG10Q8N0Z9 540 aa24.61■■□□□ 1.53
PRDM1-202ENST00000369091 POGKQ9P215 609 aa24.61■■□□□ 1.53
PRDM1-202ENST00000369091 UGGT2Q9NYU1 1516 aa24.58■■□□□ 1.53
PRDM1-202ENST00000369091 ZMYND15Q9H091 742 aa24.58■■□□□ 1.53
PRDM1-202ENST00000369091 C8orf34Q49A92 452 aa24.58■■□□□ 1.52
PRDM1-202ENST00000369091 C20orf194Q5TEA3 1177 aa24.58■■□□□ 1.52
PRDM1-202ENST00000369091 MYBBP1AQ9BQG0 1328 aaKnown RBP24.56■■□□□ 1.52
PRDM1-202ENST00000369091 NESP48681 1621 aa24.56■■□□□ 1.52
PRDM1-202ENST00000369091 EHBP1L1Q8N3D4 1523 aa24.56■■□□□ 1.52
PRDM1-202ENST00000369091 BRD4O60885 1362 aaPredicted RBP24.56■■□□□ 1.52
PRDM1-202ENST00000369091 GLIPR1L2Q4G1C9 344 aa24.55■■□□□ 1.52
PRDM1-202ENST00000369091 MAGI3Q5TCQ9 1506 aa24.55■■□□□ 1.52
PRDM1-202ENST00000369091 KIF15Q9NS87 1388 aa24.55■■□□□ 1.52
PRDM1-202ENST00000369091 FAM161AQ3B820 660 aa24.54■■□□□ 1.52
PRDM1-202ENST00000369091 TCOF1Q13428 1488 aaKnown RBP24.54■■□□□ 1.52
PRDM1-202ENST00000369091 KDM2BQ8NHM5 1336 aa24.53■■□□□ 1.52
PRDM1-202ENST00000369091 SLC4A1APQ9BWU0 796 aaKnown RBP24.52■■□□□ 1.52
PRDM1-202ENST00000369091 GRIN2BQ13224 1484 aa24.52■■□□□ 1.52
PRDM1-202ENST00000369091 ARXQ96QS3 562 aa24.51■■□□□ 1.51
PRDM1-202ENST00000369091 KTN1Q86UP2 1357 aaKnown RBP24.5■■□□□ 1.51
PRDM1-202ENST00000369091 PDE3BQ13370 1112 aa24.5■■□□□ 1.51
PRDM1-202ENST00000369091 ARHGEF11O15085 1522 aa24.5■■□□□ 1.51
PRDM1-202ENST00000369091 NAP1L5Q96NT1 182 aaPredicted RBP24.49■■□□□ 1.51
PRDM1-202ENST00000369091 CTTNBP2Q8WZ74 1663 aa24.49■■□□□ 1.51
PRDM1-202ENST00000369091 RGS3P49796 1198 aa24.47■■□□□ 1.51
PRDM1-202ENST00000369091 KDM5CP41229 1560 aa24.47■■□□□ 1.51
PRDM1-202ENST00000369091 RALBP1Q15311 655 aa24.45■■□□□ 1.5
PRDM1-202ENST00000369091 MBD5Q9P267 1494 aa24.44■■□□□ 1.5
PRDM1-202ENST00000369091 ROCK2O75116 1388 aaKnown RBP24.44■■□□□ 1.5
PRDM1-202ENST00000369091 ARID4BQ4LE39 1312 aaPredicted RBP24.44■■□□□ 1.5
PRDM1-202ENST00000369091 CENPQQ7L2Z9 268 aaPredicted RBP24.43■■□□□ 1.5
PRDM1-202ENST00000369091 RAD54L2Q9Y4B4 1467 aa24.42■■□□□ 1.5
PRDM1-202ENST00000369091 HSP90AA2PQ14568 343 aaPredicted RBP24.4■■□□□ 1.5
PRDM1-202ENST00000369091 PRDM2Q13029 1718 aa24.38■■□□□ 1.49
PRDM1-202ENST00000369091 SLKQ9H2G2 1235 aaPredicted RBP24.38■■□□□ 1.49
PRDM1-202ENST00000369091 NLRP13Q86W25 1043 aa24.38■■□□□ 1.49
PRDM1-202ENST00000369091 THOC2Q8NI27 1593 aaKnown RBP24.37■■□□□ 1.49
PRDM1-202ENST00000369091 L1TD1Q5T7N2 865 aaKnown RBP24.37■■□□□ 1.49
PRDM1-202ENST00000369091 KIF14Q15058 1648 aa24.36■■□□□ 1.49
PRDM1-202ENST00000369091 ARID3CA6NKF2 412 aa24.36■■□□□ 1.49
PRDM1-202ENST00000369091 PNNQ9H307 717 aaKnown RBP24.36■■□□□ 1.49
PRDM1-202ENST00000369091 SAMD9Q5K651 1589 aa24.36■■□□□ 1.49
PRDM1-202ENST00000369091 CARD11Q9BXL7 1154 aa24.35■■□□□ 1.49
PRDM1-202ENST00000369091 ST20-MTHFSA0A0A6YYL1 179 aa24.35■■□□□ 1.49
PRDM1-202ENST00000369091 HSP90AA1P07900 732 aaKnown RBP24.35■■□□□ 1.49
PRDM1-202ENST00000369091 PANK2Q9BZ23 570 aa24.32■■□□□ 1.48
PRDM1-202ENST00000369091 USP19O94966 1318 aa24.31■■□□□ 1.48
PRDM1-202ENST00000369091 CADPSQ9ULU8 1353 aa24.31■■□□□ 1.48
PRDM1-202ENST00000369091 DAPK1P53355 1430 aa24.31■■□□□ 1.48
PRDM1-202ENST00000369091 PZPP20742 1482 aa24.31■■□□□ 1.48
PRDM1-202ENST00000369091 XRCC6P12956 609 aaKnown RBP eCLIP24.31■■□□□ 1.48
PRDM1-202ENST00000369091 RRP9O43818 475 aaKnown RBP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms