RNA–Protein interactions for RNA: ENST00000368984.7

HTRA1-201, Transcript of HtrA serine peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTRA1, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA1-201ENST00000368984 ROCK1Q13464 1354 aa35.64■■■■□ 3.3
HTRA1-201ENST00000368984 KDM6BO15054 1643 aa35.63■■■■□ 3.29
HTRA1-201ENST00000368984 CAMSAP2Q08AD1 1489 aa35.61■■■■□ 3.29
HTRA1-201ENST00000368984 ABCC10Q5T3U5 1492 aa35.58■■■■□ 3.29
HTRA1-201ENST00000368984 ERCC6L2Q5T890 1561 aa35.55■■■■□ 3.28
HTRA1-201ENST00000368984 CLASP1Q7Z460 1538 aa35.52■■■■□ 3.28
HTRA1-201ENST00000368984 CDC42BPAQ5VT25 1732 aa35.51■■■■□ 3.28
HTRA1-201ENST00000368984 DENND4BO75064 1496 aaPredicted RBP35.51■■■■□ 3.27
HTRA1-201ENST00000368984 PPP1R15AO75807 674 aaPredicted RBP35.48■■■■□ 3.27
HTRA1-201ENST00000368984 TRIM52Q96A61 297 aa35.48■■■■□ 3.27
HTRA1-201ENST00000368984 ZNF777Q9ULD5 760 aaPredicted RBP35.48■■■■□ 3.27
HTRA1-201ENST00000368984 MIER1Q8N108 512 aa35.47■■■■□ 3.27
HTRA1-201ENST00000368984 ACIN1Q9UKV3 1341 aaKnown RBP35.42■■■■□ 3.26
HTRA1-201ENST00000368984 TONSLQ96HA7 1378 aa35.41■■■■□ 3.26
HTRA1-201ENST00000368984 MPHOSPH9Q99550 1183 aa35.41■■■■□ 3.26
HTRA1-201ENST00000368984 CROCC2H7BZ55 1655 aa35.4■■■■□ 3.26
HTRA1-201ENST00000368984 NCOA1Q15788 1441 aa35.4■■■■□ 3.26
HTRA1-201ENST00000368984 ABCC2Q92887 1545 aa35.4■■■■□ 3.26
HTRA1-201ENST00000368984 ADGRL2O95490 1459 aa35.38■■■■□ 3.25
HTRA1-201ENST00000368984 ADGBQ8N7X0 1667 aa35.38■■■■□ 3.25
HTRA1-201ENST00000368984 ANKRD30AQ9BXX3 1397 aa35.27■■■■□ 3.24
HTRA1-201ENST00000368984 SHANK2Q9UPX8 1470 aa35.27■■■■□ 3.24
HTRA1-201ENST00000368984 KDM5BQ9UGL1 1544 aa35.27■■■■□ 3.24
HTRA1-201ENST00000368984 PREX2Q70Z35 1606 aa35.25■■■■□ 3.23
HTRA1-201ENST00000368984 CDC42BPBQ9Y5S2 1711 aa35.25■■■■□ 3.23
HTRA1-201ENST00000368984 UHRF1BP1LA0JNW5 1464 aa35.23■■■■□ 3.23
HTRA1-201ENST00000368984 FOXD1Q16676 465 aa35.21■■■■□ 3.23
HTRA1-201ENST00000368984 C9orf84Q5VXU9 1444 aa35.21■■■■□ 3.23
HTRA1-201ENST00000368984 MBD5Q9P267 1494 aa35.21■■■■□ 3.23
HTRA1-201ENST00000368984 ARHGEF5Q12774 1597 aa35.2■■■■□ 3.23
HTRA1-201ENST00000368984 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.2■■■■□ 3.23
HTRA1-201ENST00000368984 SAMD9LQ8IVG5 1584 aa35.19■■■■□ 3.22
HTRA1-201ENST00000368984 TTC37Q6PGP7 1564 aa35.19■■■■□ 3.22
HTRA1-201ENST00000368984 ANKRD30BQ9BXX2 1392 aa35.18■■■■□ 3.22
HTRA1-201ENST00000368984 HNRNPMP52272 730 aaKnown RBP eCLIP35.17■■■■□ 3.22
HTRA1-201ENST00000368984 SLC4A1APQ9BWU0 796 aaKnown RBP35.17■■■■□ 3.22
HTRA1-201ENST00000368984 PZPP20742 1482 aa35.16■■■■□ 3.22
HTRA1-201ENST00000368984 ANKRD50Q9ULJ7 1429 aa35.15■■■■□ 3.22
HTRA1-201ENST00000368984 TSPY4P0CV99 314 aa35.15■■■■□ 3.22
HTRA1-201ENST00000368984 TSPY10P0CW01 314 aa35.15■■■■□ 3.22
HTRA1-201ENST00000368984 ZCCHC11Q5TAX3 1644 aaKnown RBP35.15■■■■□ 3.22
HTRA1-201ENST00000368984 CENPBP07199 599 aaPredicted RBP35.1■■■■□ 3.21
HTRA1-201ENST00000368984 CCDC141Q6ZP82 1450 aa35.09■■■■□ 3.21
HTRA1-201ENST00000368984 RSPH4AQ5TD94 716 aa35.08■■■■□ 3.21
HTRA1-201ENST00000368984 RPRD2Q5VT52 1461 aaKnown RBP35.07■■■■□ 3.2
HTRA1-201ENST00000368984 ARHGAP5Q13017 1502 aa35.07■■■■□ 3.2
HTRA1-201ENST00000368984 KCNH8Q96L42 1107 aa35.05■■■■□ 3.2
HTRA1-201ENST00000368984 MYO5CQ9NQX4 1742 aa35.05■■■■□ 3.2
HTRA1-201ENST00000368984 HIRIP3Q9BW71 556 aaPredicted RBP35.02■■■■□ 3.2
HTRA1-201ENST00000368984 KIF15Q9NS87 1388 aa35.02■■■■□ 3.2
HTRA1-201ENST00000368984 L3MBTL2Q969R5 705 aa35.02■■■■□ 3.2
HTRA1-201ENST00000368984 SYCP2Q9BX26 1530 aa35.01■■■■□ 3.2
HTRA1-201ENST00000368984 YTHDC1Q96MU7 727 aaKnown RBP34.99■■■■□ 3.19
HTRA1-201ENST00000368984 KIAA1107Q9UPP5 1409 aa34.98■■■■□ 3.19
HTRA1-201ENST00000368984 PLCH2O75038 1416 aa34.96■■■■□ 3.19
HTRA1-201ENST00000368984 SCAF1Q9H7N4 1312 aaKnown RBP34.95■■■■□ 3.19
HTRA1-201ENST00000368984 PLEKHH2Q8IVE3 1493 aa34.94■■■■□ 3.18
HTRA1-201ENST00000368984 TEX14Q8IWB6 1497 aa34.94■■■■□ 3.18
HTRA1-201ENST00000368984 MAST1Q9Y2H9 1570 aa34.93■■■■□ 3.18
HTRA1-201ENST00000368984 DDX10Q13206 875 aaKnown RBP34.93■■■■□ 3.18
HTRA1-201ENST00000368984 PKD2Q13563 968 aa34.93■■■■□ 3.18
HTRA1-201ENST00000368984 KDM5DQ9BY66 1539 aa34.92■■■■□ 3.18
HTRA1-201ENST00000368984 NUP155O75694 1391 aa34.92■■■■□ 3.18
HTRA1-201ENST00000368984 ARHGEF12Q9NZN5 1544 aa34.87■■■■□ 3.17
HTRA1-201ENST00000368984 EFCAB2Q5VUJ9 269 aa34.84■■■■□ 3.17
HTRA1-201ENST00000368984 OSCARQ8IYS5 282 aa34.84■■■■□ 3.17
HTRA1-201ENST00000368984 WDR7Q9Y4E6 1490 aa34.8■■■■□ 3.16
HTRA1-201ENST00000368984 NBPF8Q3BBV2 869 aa34.79■■■■□ 3.16
HTRA1-201ENST00000368984 PLXNC1O60486 1568 aa34.79■■■■□ 3.16
HTRA1-201ENST00000368984 ABCC1P33527 1531 aa34.77■■■■□ 3.16
HTRA1-201ENST00000368984 ARAP3Q8WWN8 1544 aa34.76■■■■□ 3.15
HTRA1-201ENST00000368984 HSPA5P11021 654 aaKnown RBP34.76■■■■□ 3.15
HTRA1-201ENST00000368984 EIF4G2P78344 907 aaKnown RBP eCLIP34.72■■■■□ 3.15
HTRA1-201ENST00000368984 FAM135AQ9P2D6 1515 aa34.71■■■■□ 3.15
HTRA1-201ENST00000368984 TRAPPC8Q9Y2L5 1435 aa34.7■■■■□ 3.14
HTRA1-201ENST00000368984 UNC13BO14795 1591 aa34.68■■■■□ 3.14
HTRA1-201ENST00000368984 DUOX2Q9NRD8 1548 aa34.67■■■■□ 3.14
HTRA1-201ENST00000368984 ABCA9Q8IUA7 1624 aa34.65■■■■□ 3.14
HTRA1-201ENST00000368984 ASXL2Q76L83 1435 aa34.64■■■■□ 3.14
HTRA1-201ENST00000368984 ERBINQ96RT1 1412 aa34.6■■■■□ 3.13
HTRA1-201ENST00000368984 WASHC2AQ641Q2 1341 aa34.6■■■■□ 3.13
HTRA1-201ENST00000368984 GTF3C3Q9Y5Q9 886 aa34.58■■■■□ 3.13
HTRA1-201ENST00000368984 FANCAO15360 1455 aa34.56■■■■□ 3.12
HTRA1-201ENST00000368984 SPATA31E1Q6ZUB1 1445 aa34.56■■■■□ 3.12
HTRA1-201ENST00000368984 RTEL1-TNFRSF6BF6WH68 1400 aa34.56■■■■□ 3.12
HTRA1-201ENST00000368984 IQGAP3Q86VI3 1631 aa34.55■■■■□ 3.12
HTRA1-201ENST00000368984 AFAP1Q8N556 730 aa34.55■■■■□ 3.12
HTRA1-201ENST00000368984 MAGI2Q86UL8 1455 aa34.55■■■■□ 3.12
HTRA1-201ENST00000368984 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.54■■■■□ 3.12
HTRA1-201ENST00000368984 SPAG9O60271 1321 aaKnown RBP34.53■■■■□ 3.12
HTRA1-201ENST00000368984 ANP32CO43423 234 aa34.52■■■■□ 3.12
HTRA1-201ENST00000368984 UHRF1BP1Q6BDS2 1440 aa34.51■■■■□ 3.12
HTRA1-201ENST00000368984 ZFYVE16Q7Z3T8 1539 aa34.5■■■■□ 3.11
HTRA1-201ENST00000368984 C11orf95C9JLR9 678 aaPredicted RBP34.48■■■■□ 3.11
HTRA1-201ENST00000368984 NPM1P06748 294 aaKnown RBP eCLIP34.48■■■■□ 3.11
HTRA1-201ENST00000368984 PLA2R1Q13018 1463 aa34.46■■■■□ 3.11
HTRA1-201ENST00000368984 CCER2I3L3R5 266 aa34.45■■■■□ 3.11
HTRA1-201ENST00000368984 ZNF326Q5BKZ1 582 aaKnown RBP34.44■■■■□ 3.1
HTRA1-201ENST00000368984 ADGRL1O94910 1474 aa34.43■■■■□ 3.1
HTRA1-201ENST00000368984 CCDC144AA2RUR9 1427 aa34.42■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms