RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 HSPA5P11021 654 aaKnown RBP14.17□□□□□ -0.14
EBF3-202ENST00000368648 SLKQ9H2G2 1235 aaPredicted RBP14.17□□□□□ -0.14
EBF3-202ENST00000368648 GGT6Q6P531 493 aa14.16□□□□□ -0.14
EBF3-202ENST00000368648 WDR43Q15061 677 aaKnown RBP eCLIP14.15□□□□□ -0.14
EBF3-202ENST00000368648 ZBTB7CA1YPR0 619 aa14.15□□□□□ -0.14
EBF3-202ENST00000368648 NEUROD2Q15784 382 aa14.15□□□□□ -0.14
EBF3-202ENST00000368648 FHOD3Q2V2M9 1422 aa14.14□□□□□ -0.15
EBF3-202ENST00000368648 POLA1P09884 1462 aaPredicted RBP14.14□□□□□ -0.15
EBF3-202ENST00000368648 NCLP19338 710 aaKnown RBP14.12□□□□□ -0.15
EBF3-202ENST00000368648 RAPGEF2Q9Y4G8 1499 aa14.12□□□□□ -0.15
EBF3-202ENST00000368648 FANCIQ9NVI1 1328 aa14.11□□□□□ -0.15
EBF3-202ENST00000368648 AMER1Q5JTC6 1135 aaPredicted RBP14.11□□□□□ -0.15
EBF3-202ENST00000368648 RAB3GAP2Q9H2M9 1393 aa14.11□□□□□ -0.15
EBF3-202ENST00000368648 DHX57Q6P158 1386 aaKnown RBP14.11□□□□□ -0.15
EBF3-202ENST00000368648 VPS8Q8N3P4 1428 aa14.1□□□□□ -0.15
EBF3-202ENST00000368648 CC2D1BQ5T0F9 858 aaKnown RBP14.1□□□□□ -0.15
EBF3-202ENST00000368648 IFT140Q96RY7 1462 aa14.1□□□□□ -0.15
EBF3-202ENST00000368648 URB2Q14146 1524 aaKnown RBP14.1□□□□□ -0.15
EBF3-202ENST00000368648 BECN1Q14457 450 aa14.09□□□□□ -0.15
EBF3-202ENST00000368648 IGF1RP08069 1367 aa14.08□□□□□ -0.16
EBF3-202ENST00000368648 FRAT1Q92837 279 aaPredicted RBP14.08□□□□□ -0.16
EBF3-202ENST00000368648 VSIG10Q8N0Z9 540 aa14.08□□□□□ -0.16
EBF3-202ENST00000368648 CUX1P39880 1505 aa14.07□□□□□ -0.16
EBF3-202ENST00000368648 ZNF608Q9ULD9 1512 aaPredicted RBP14.07□□□□□ -0.16
EBF3-202ENST00000368648 EFCAB2Q5VUJ9 269 aa14.07□□□□□ -0.16
EBF3-202ENST00000368648 BRPF3Q9ULD4 1205 aa14.06□□□□□ -0.16
EBF3-202ENST00000368648 A0A0G2JS52 829 aa14.06□□□□□ -0.16
EBF3-202ENST00000368648 PLIN1O60240 522 aa14.05□□□□□ -0.16
EBF3-202ENST00000368648 FMN1Q68DA7 1419 aa14.05□□□□□ -0.16
EBF3-202ENST00000368648 GRIN2BQ13224 1484 aa14.05□□□□□ -0.16
EBF3-202ENST00000368648 HNRNPMP52272 730 aaKnown RBP eCLIP14.04□□□□□ -0.16
EBF3-202ENST00000368648 CARD11Q9BXL7 1154 aa14.04□□□□□ -0.16
EBF3-202ENST00000368648 SYNJ1O43426 1573 aa14.02□□□□□ -0.17
EBF3-202ENST00000368648 DNMBPQ6XZF7 1577 aa14.01□□□□□ -0.17
EBF3-202ENST00000368648 PNNQ9H307 717 aaKnown RBP14.01□□□□□ -0.17
EBF3-202ENST00000368648 SNAPC4Q5SXM2 1469 aa14.01□□□□□ -0.17
EBF3-202ENST00000368648 EXOC6Q8TAG9 804 aa14.01□□□□□ -0.17
EBF3-202ENST00000368648 RCAN3Q9UKA8 241 aa14.01□□□□□ -0.17
EBF3-202ENST00000368648 PDE4AP27815 886 aa14□□□□□ -0.17
EBF3-202ENST00000368648 DCAF11Q8TEB1 546 aa14□□□□□ -0.17
EBF3-202ENST00000368648 LMOD2Q6P5Q4 547 aa14□□□□□ -0.17
EBF3-202ENST00000368648 TNNT2P45379 298 aaPredicted RBP14□□□□□ -0.17
EBF3-202ENST00000368648 ARHGAP35Q9NRY4 1499 aa14□□□□□ -0.17
EBF3-202ENST00000368648 PTPRGP23470 1445 aa13.99□□□□□ -0.17
EBF3-202ENST00000368648 DNTTIP2Q5QJE6 756 aaKnown RBP13.99□□□□□ -0.17
EBF3-202ENST00000368648 KIF3BO15066 747 aa13.99□□□□□ -0.17
EBF3-202ENST00000368648 PKD2Q13563 968 aa13.99□□□□□ -0.17
EBF3-202ENST00000368648 SAFB2Q14151 953 aaKnown RBP eCLIP13.99□□□□□ -0.17
EBF3-202ENST00000368648 GSE1Q14687 1217 aa13.98□□□□□ -0.17
EBF3-202ENST00000368648 POGKQ9P215 609 aa13.98□□□□□ -0.17
EBF3-202ENST00000368648 SETD5Q9C0A6 1442 aa13.98□□□□□ -0.17
EBF3-202ENST00000368648 NUDCQ9Y266 331 aa13.97□□□□□ -0.17
EBF3-202ENST00000368648 TCERG1O14776 1098 aaKnown RBP13.96□□□□□ -0.17
EBF3-202ENST00000368648 HAP1P54257 671 aaPredicted RBP13.95□□□□□ -0.18
EBF3-202ENST00000368648 PLCB2Q00722 1185 aa13.95□□□□□ -0.18
EBF3-202ENST00000368648 KANK1Q14678 1352 aa13.95□□□□□ -0.18
EBF3-202ENST00000368648 PTMAP06454 111 aaKnown RBP13.94□□□□□ -0.18
EBF3-202ENST00000368648 L3MBTL2Q969R5 705 aa13.93□□□□□ -0.18
EBF3-202ENST00000368648 SPAG9O60271 1321 aaKnown RBP13.93□□□□□ -0.18
EBF3-202ENST00000368648 NUP155O75694 1391 aa13.92□□□□□ -0.18
EBF3-202ENST00000368648 CCDC184Q52MB2 194 aa13.92□□□□□ -0.18
EBF3-202ENST00000368648 STK26Q9P289 416 aa13.92□□□□□ -0.18
EBF3-202ENST00000368648 KIF21AQ7Z4S6 1674 aa13.91□□□□□ -0.18
EBF3-202ENST00000368648 FAM69CQ0P6D2 419 aa13.91□□□□□ -0.18
EBF3-202ENST00000368648 PRKRIP1Q9H875 184 aaPredicted RBP13.91□□□□□ -0.18
EBF3-202ENST00000368648 HSP90AA2PQ14568 343 aaPredicted RBP13.9□□□□□ -0.18
EBF3-202ENST00000368648 PRG4Q92954 1404 aaPredicted RBP13.9□□□□□ -0.19
EBF3-202ENST00000368648 FOXD4L1Q9NU39 408 aa13.89□□□□□ -0.19
EBF3-202ENST00000368648 NUTM2DQ5VT03 806 aaPredicted RBP13.89□□□□□ -0.19
EBF3-202ENST00000368648 SKAP1Q86WV1 359 aa13.89□□□□□ -0.19
EBF3-202ENST00000368648 SOX12O15370 315 aa13.88□□□□□ -0.19
EBF3-202ENST00000368648 KNSTRNQ9Y448 316 aa13.88□□□□□ -0.19
EBF3-202ENST00000368648 NFKBIBQ15653 356 aa13.87□□□□□ -0.19
EBF3-202ENST00000368648 TOP2BQ02880 1626 aa13.87□□□□□ -0.19
EBF3-202ENST00000368648 GOLGA6L22H0YM25 854 aa13.87□□□□□ -0.19
EBF3-202ENST00000368648 L1TD1Q5T7N2 865 aaKnown RBP13.86□□□□□ -0.19
EBF3-202ENST00000368648 MPHOSPH9Q99550 1183 aa13.86□□□□□ -0.19
EBF3-202ENST00000368648 HSP90AB1P08238 724 aaKnown RBP13.86□□□□□ -0.19
EBF3-202ENST00000368648 FTSJ3Q8IY81 847 aaKnown RBP13.86□□□□□ -0.19
EBF3-202ENST00000368648 ANKRD30AQ9BXX3 1397 aa13.86□□□□□ -0.19
EBF3-202ENST00000368648 CLUAP1Q96AJ1 413 aa13.86□□□□□ -0.19
EBF3-202ENST00000368648 WASHC2CQ9Y4E1 1318 aa13.86□□□□□ -0.19
EBF3-202ENST00000368648 CCDC18Q5T9S5 1454 aa13.85□□□□□ -0.19
EBF3-202ENST00000368648 ABCA10Q8WWZ4 1543 aa13.84□□□□□ -0.19
EBF3-202ENST00000368648 CDCA8Q53HL2 280 aa13.84□□□□□ -0.19
EBF3-202ENST00000368648 SRPK2P78362 688 aaKnown RBP13.83□□□□□ -0.2
EBF3-202ENST00000368648 CRBNQ96SW2 442 aa13.83□□□□□ -0.2
EBF3-202ENST00000368648 USP35Q9P2H5 1018 aa13.83□□□□□ -0.2
EBF3-202ENST00000368648 GOLGA6L3A6NEY3 463 aa13.83□□□□□ -0.2
EBF3-202ENST00000368648 FRAT2O75474 233 aaPredicted RBP13.82□□□□□ -0.2
EBF3-202ENST00000368648 MSNP26038 577 aaKnown RBP13.81□□□□□ -0.2
EBF3-202ENST00000368648 CCDC146Q8IYE0 955 aa13.81□□□□□ -0.2
EBF3-202ENST00000368648 RSPH6AQ9H0K4 717 aa13.81□□□□□ -0.2
EBF3-202ENST00000368648 ZBED9Q6R2W3 1325 aa13.81□□□□□ -0.2
EBF3-202ENST00000368648 ZNF644Q9H582 1327 aaPredicted RBP13.81□□□□□ -0.2
EBF3-202ENST00000368648 MFAP1P55081 439 aaKnown RBP13.81□□□□□ -0.2
EBF3-202ENST00000368648 SYNJ2O15056 1496 aa13.8□□□□□ -0.2
EBF3-202ENST00000368648 HDGFP51858 240 aaKnown RBP13.8□□□□□ -0.2
EBF3-202ENST00000368648 RRP1P56182 461 aaKnown RBP13.79□□□□□ -0.2
EBF3-202ENST00000368648 MYH16Q9H6N6 1097 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms