RNA–Protein interactions for RNA: ENST00000368449.8

SHC1-203, Transcript of SHC adaptor protein 1, humanhuman

TSL 5 BASIC

Gene SHC1, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-203ENST00000368449 PBRM1Q86U86 1689 aa17.44■□□□□ 0.38
SHC1-203ENST00000368449 CNTLNQ9NXG0 1405 aa17.42■□□□□ 0.38
SHC1-203ENST00000368449 ADAMTS12P58397 1594 aa17.41■□□□□ 0.38
SHC1-203ENST00000368449 ANKRD30BQ9BXX2 1392 aa17.41■□□□□ 0.38
SHC1-203ENST00000368449 CCDC7Q96M83 1385 aa17.4■□□□□ 0.38
SHC1-203ENST00000368449 NCOA1Q15788 1441 aa17.4■□□□□ 0.38
SHC1-203ENST00000368449 DAPK1P53355 1430 aa17.39■□□□□ 0.37
SHC1-203ENST00000368449 PRKRIP1Q9H875 184 aaPredicted RBP17.39■□□□□ 0.37
SHC1-203ENST00000368449 ABCC5O15440 1437 aa17.38■□□□□ 0.37
SHC1-203ENST00000368449 RPRD2Q5VT52 1461 aaKnown RBP17.37■□□□□ 0.37
SHC1-203ENST00000368449 TEX14Q8IWB6 1497 aa17.36■□□□□ 0.37
SHC1-203ENST00000368449 FAM9BQ8IZU0 186 aa17.36■□□□□ 0.37
SHC1-203ENST00000368449 ROCK1Q13464 1354 aa17.35■□□□□ 0.37
SHC1-203ENST00000368449 ZNF608Q9ULD9 1512 aaPredicted RBP17.34■□□□□ 0.37
SHC1-203ENST00000368449 SLC4A1APQ9BWU0 796 aaKnown RBP17.34■□□□□ 0.37
SHC1-203ENST00000368449 KIF7Q2M1P5 1343 aa17.33■□□□□ 0.37
SHC1-203ENST00000368449 NUP153P49790 1475 aaKnown RBP17.33■□□□□ 0.36
SHC1-203ENST00000368449 DISP1Q96F81 1524 aa17.33■□□□□ 0.36
SHC1-203ENST00000368449 SPATA31E1Q6ZUB1 1445 aa17.33■□□□□ 0.36
SHC1-203ENST00000368449 MRS2Q9HD23 443 aa17.33■□□□□ 0.36
SHC1-203ENST00000368449 DNMT1P26358 1616 aaKnown RBP17.32■□□□□ 0.36
SHC1-203ENST00000368449 MRC2Q9UBG0 1479 aa17.29■□□□□ 0.36
SHC1-203ENST00000368449 KIAA0556O60303 1618 aa17.28■□□□□ 0.36
SHC1-203ENST00000368449 PRG4Q92954 1404 aaPredicted RBP17.27■□□□□ 0.36
SHC1-203ENST00000368449 KIAA0586Q9BVV6 1533 aa17.27■□□□□ 0.36
SHC1-203ENST00000368449 PZPP20742 1482 aa17.27■□□□□ 0.36
SHC1-203ENST00000368449 CDK11AQ9UQ88 783 aaPredicted RBP17.26■□□□□ 0.35
SHC1-203ENST00000368449 FANCIQ9NVI1 1328 aa17.25■□□□□ 0.35
SHC1-203ENST00000368449 CNGB1Q14028 1251 aaPredicted RBP17.25■□□□□ 0.35
SHC1-203ENST00000368449 ZBED9Q6R2W3 1325 aa17.25■□□□□ 0.35
SHC1-203ENST00000368449 ERICH6Q7L0X2 663 aa17.24■□□□□ 0.35
SHC1-203ENST00000368449 PPP4R2Q9NY27 417 aa17.24■□□□□ 0.35
SHC1-203ENST00000368449 RAPGEF6Q8TEU7 1601 aa17.23■□□□□ 0.35
SHC1-203ENST00000368449 CFDP1Q9UEE9 299 aaPredicted RBP17.22■□□□□ 0.35
SHC1-203ENST00000368449 ZNF777Q9ULD5 760 aaPredicted RBP17.22■□□□□ 0.35
SHC1-203ENST00000368449 PRKCSHP14314 528 aaPredicted RBP17.22■□□□□ 0.35
SHC1-203ENST00000368449 ZNF326Q5BKZ1 582 aaKnown RBP17.22■□□□□ 0.35
SHC1-203ENST00000368449 B4GALNT3Q6L9W6 998 aa17.22■□□□□ 0.35
SHC1-203ENST00000368449 CAMSAP2Q08AD1 1489 aa17.21■□□□□ 0.35
SHC1-203ENST00000368449 ERICH6BQ5W0A0 696 aa17.21■□□□□ 0.35
SHC1-203ENST00000368449 DHX29Q7Z478 1369 aaKnown RBP17.21■□□□□ 0.34
SHC1-203ENST00000368449 IFT140Q96RY7 1462 aa17.2■□□□□ 0.34
SHC1-203ENST00000368449 TROQ12816 1431 aaPredicted RBP17.19■□□□□ 0.34
SHC1-203ENST00000368449 GRIN2AQ12879 1464 aa17.19■□□□□ 0.34
SHC1-203ENST00000368449 PLB1Q6P1J6 1458 aa17.19■□□□□ 0.34
SHC1-203ENST00000368449 MBD5Q9P267 1494 aa17.19■□□□□ 0.34
SHC1-203ENST00000368449 GPATCH8Q9UKJ3 1502 aaKnown RBP17.19■□□□□ 0.34
SHC1-203ENST00000368449 POLR3GLQ9BT43 218 aa17.19■□□□□ 0.34
SHC1-203ENST00000368449 PKD2Q13563 968 aa17.18■□□□□ 0.34
SHC1-203ENST00000368449 BCORL1Q5H9F3 1711 aa17.18■□□□□ 0.34
SHC1-203ENST00000368449 POLR1AO95602 1720 aaPredicted RBP17.18■□□□□ 0.34
SHC1-203ENST00000368449 SENP3-EIF4A1A0A087X0R7 540 aa17.18■□□□□ 0.34
SHC1-203ENST00000368449 USP47Q96K76 1375 aa17.17■□□□□ 0.34
SHC1-203ENST00000368449 KIF14Q15058 1648 aa17.17■□□□□ 0.34
SHC1-203ENST00000368449 KIAA1107Q9UPP5 1409 aa17.17■□□□□ 0.34
SHC1-203ENST00000368449 DEKP35659 375 aaKnown RBP17.14■□□□□ 0.33
SHC1-203ENST00000368449 EIF4G3O43432 1585 aaKnown RBP17.12■□□□□ 0.33
SHC1-203ENST00000368449 ADGRL2O95490 1459 aa17.12■□□□□ 0.33
SHC1-203ENST00000368449 ADGBQ8N7X0 1667 aa17.1■□□□□ 0.33
SHC1-203ENST00000368449 ANKRD50Q9ULJ7 1429 aa17.1■□□□□ 0.33
SHC1-203ENST00000368449 CEP170Q5SW79 1584 aa17.09■□□□□ 0.33
SHC1-203ENST00000368449 FBLN2P98095 1184 aa17.09■□□□□ 0.33
SHC1-203ENST00000368449 CHMP7Q8WUX9 453 aaPredicted RBP17.09■□□□□ 0.33
SHC1-203ENST00000368449 ANKRD30AQ9BXX3 1397 aa17.09■□□□□ 0.33
SHC1-203ENST00000368449 KDM5CP41229 1560 aa17.09■□□□□ 0.33
SHC1-203ENST00000368449 ITSN2Q9NZM3 1697 aa17.08■□□□□ 0.33
SHC1-203ENST00000368449 SMG6Q86US8 1419 aaKnown RBP17.08■□□□□ 0.33
SHC1-203ENST00000368449 CROCC2H7BZ55 1655 aa17.07■□□□□ 0.32
SHC1-203ENST00000368449 NUP155O75694 1391 aa17.07■□□□□ 0.32
SHC1-203ENST00000368449 ADCY10Q96PN6 1610 aa17.06■□□□□ 0.32
SHC1-203ENST00000368449 PNISRQ8TF01 805 aaKnown RBP17.06■□□□□ 0.32
SHC1-203ENST00000368449 JPH4Q96JJ6 628 aa17.06■□□□□ 0.32
SHC1-203ENST00000368449 NUDCQ9Y266 331 aa17.06■□□□□ 0.32
SHC1-203ENST00000368449 ERCC6Q03468 1493 aa17.06■□□□□ 0.32
SHC1-203ENST00000368449 KDM2AQ9Y2K7 1162 aa17.05■□□□□ 0.32
SHC1-203ENST00000368449 CARD11Q9BXL7 1154 aa17.04■□□□□ 0.32
SHC1-203ENST00000368449 UHRF1BP1Q6BDS2 1440 aa17.04■□□□□ 0.32
SHC1-203ENST00000368449 RNF123Q5XPI4 1314 aa17.03■□□□□ 0.32
SHC1-203ENST00000368449 ST20-MTHFSA0A0A6YYL1 179 aa17.03■□□□□ 0.32
SHC1-203ENST00000368449 RALGAPBQ86X10 1494 aa17.02■□□□□ 0.32
SHC1-203ENST00000368449 C9orf84Q5VXU9 1444 aa17.02■□□□□ 0.31
SHC1-203ENST00000368449 MYT1LQ9UL68 1186 aa17.02■□□□□ 0.31
SHC1-203ENST00000368449 ARID4BQ4LE39 1312 aaPredicted RBP17.01■□□□□ 0.31
SHC1-203ENST00000368449 SYNJ2O15056 1496 aa17.01■□□□□ 0.31
SHC1-203ENST00000368449 MAGI1Q96QZ7 1491 aaPredicted RBP17.01■□□□□ 0.31
SHC1-203ENST00000368449 PLEKHD1A6NEE1 506 aa17.01■□□□□ 0.31
SHC1-203ENST00000368449 ABCC10Q5T3U5 1492 aa17.01■□□□□ 0.31
SHC1-203ENST00000368449 CDC42BPAQ5VT25 1732 aa17.01■□□□□ 0.31
SHC1-203ENST00000368449 TMC1Q8TDI8 760 aa17■□□□□ 0.31
SHC1-203ENST00000368449 HNRNPMP52272 730 aaKnown RBP eCLIP17■□□□□ 0.31
SHC1-203ENST00000368449 NBR1Q14596 966 aa17■□□□□ 0.31
SHC1-203ENST00000368449 DCAF11Q8TEB1 546 aa16.99■□□□□ 0.31
SHC1-203ENST00000368449 ATP10BO94823 1461 aa16.99■□□□□ 0.31
SHC1-203ENST00000368449 CARMIL2Q6F5E8 1435 aa16.99■□□□□ 0.31
SHC1-203ENST00000368449 NUP160Q12769 1436 aa16.97■□□□□ 0.31
SHC1-203ENST00000368449 ROCK2O75116 1388 aaKnown RBP16.96■□□□□ 0.31
SHC1-203ENST00000368449 ANO8Q9HCE9 1232 aaPredicted RBP16.96■□□□□ 0.31
SHC1-203ENST00000368449 TSPY4P0CV99 314 aa16.96■□□□□ 0.31
SHC1-203ENST00000368449 TSPY10P0CW01 314 aa16.96■□□□□ 0.31
SHC1-203ENST00000368449 SHANK2Q9UPX8 1470 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms