RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 HNRNPMP52272 730 aaKnown RBP eCLIP19.52■□□□□ 0.72
SHC1-202ENST00000368445 LRRIQ1Q96JM4 1722 aa19.52■□□□□ 0.71
SHC1-202ENST00000368445 MYT1LQ9UL68 1186 aa19.5■□□□□ 0.71
SHC1-202ENST00000368445 CEP170Q5SW79 1584 aa19.5■□□□□ 0.71
SHC1-202ENST00000368445 MIA2Q96PC5 1412 aa19.48■□□□□ 0.71
SHC1-202ENST00000368445 TROQ12816 1431 aaPredicted RBP19.48■□□□□ 0.71
SHC1-202ENST00000368445 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.47■□□□□ 0.71
SHC1-202ENST00000368445 L3MBTL2Q969R5 705 aa19.46■□□□□ 0.71
SHC1-202ENST00000368445 ANP32CO43423 234 aa19.46■□□□□ 0.71
SHC1-202ENST00000368445 RAPGEF6Q8TEU7 1601 aa19.45■□□□□ 0.7
SHC1-202ENST00000368445 NUP160Q12769 1436 aa19.43■□□□□ 0.7
SHC1-202ENST00000368445 DAPK1P53355 1430 aa19.42■□□□□ 0.7
SHC1-202ENST00000368445 PKD2Q13563 968 aa19.42■□□□□ 0.7
SHC1-202ENST00000368445 ABCC5O15440 1437 aa19.41■□□□□ 0.7
SHC1-202ENST00000368445 KDM2AQ9Y2K7 1162 aa19.4■□□□□ 0.7
SHC1-202ENST00000368445 EIF4G2P78344 907 aaKnown RBP eCLIP19.38■□□□□ 0.69
SHC1-202ENST00000368445 ANKRD30AQ9BXX3 1397 aa19.37■□□□□ 0.69
SHC1-202ENST00000368445 HSPA5P11021 654 aaKnown RBP19.37■□□□□ 0.69
SHC1-202ENST00000368445 ATP10BO94823 1461 aa19.36■□□□□ 0.69
SHC1-202ENST00000368445 ARHGEF11O15085 1522 aa19.35■□□□□ 0.69
SHC1-202ENST00000368445 TCOF1Q13428 1488 aaKnown RBP19.35■□□□□ 0.69
SHC1-202ENST00000368445 NUP155O75694 1391 aa19.35■□□□□ 0.69
SHC1-202ENST00000368445 GPATCH8Q9UKJ3 1502 aaKnown RBP19.34■□□□□ 0.69
SHC1-202ENST00000368445 CAMSAP2Q08AD1 1489 aa19.32■□□□□ 0.68
SHC1-202ENST00000368445 RGL3Q3MIN7 710 aa19.3■□□□□ 0.68
SHC1-202ENST00000368445 KDM6BO15054 1643 aa19.28■□□□□ 0.68
SHC1-202ENST00000368445 KIF14Q15058 1648 aa19.27■□□□□ 0.68
SHC1-202ENST00000368445 ROCK1Q13464 1354 aa19.27■□□□□ 0.67
SHC1-202ENST00000368445 NCOA1Q15788 1441 aa19.26■□□□□ 0.67
SHC1-202ENST00000368445 AKNAQ7Z591 1439 aa19.26■□□□□ 0.67
SHC1-202ENST00000368445 ANKRD50Q9ULJ7 1429 aa19.26■□□□□ 0.67
SHC1-202ENST00000368445 NBPF8Q3BBV2 869 aa19.25■□□□□ 0.67
SHC1-202ENST00000368445 KIF15Q9NS87 1388 aa19.22■□□□□ 0.67
SHC1-202ENST00000368445 DCAF11Q8TEB1 546 aa19.21■□□□□ 0.67
SHC1-202ENST00000368445 C9orf84Q5VXU9 1444 aa19.21■□□□□ 0.67
SHC1-202ENST00000368445 ANKRD30BQ9BXX2 1392 aa19.21■□□□□ 0.67
SHC1-202ENST00000368445 EFCAB2Q5VUJ9 269 aa19.2■□□□□ 0.66
SHC1-202ENST00000368445 NPM1P06748 294 aaKnown RBP eCLIP19.19■□□□□ 0.66
SHC1-202ENST00000368445 BCANQ96GW7 911 aa19.17■□□□□ 0.66
SHC1-202ENST00000368445 WASHC2AQ641Q2 1341 aa19.16■□□□□ 0.66
SHC1-202ENST00000368445 DNMT1P26358 1616 aaKnown RBP19.16■□□□□ 0.66
SHC1-202ENST00000368445 ABCA8O94911 1581 aa19.15■□□□□ 0.66
SHC1-202ENST00000368445 CARD11Q9BXL7 1154 aa19.15■□□□□ 0.66
SHC1-202ENST00000368445 ARHGAP5Q13017 1502 aa19.15■□□□□ 0.66
SHC1-202ENST00000368445 RSPH4AQ5TD94 716 aa19.15■□□□□ 0.66
SHC1-202ENST00000368445 CHD1O14646 1710 aa19.14■□□□□ 0.66
SHC1-202ENST00000368445 AFAP1Q8N556 730 aa19.14■□□□□ 0.65
SHC1-202ENST00000368445 ERCC6L2Q5T890 1561 aa19.14■□□□□ 0.65
SHC1-202ENST00000368445 HNRNPUQ00839 825 aaKnown RBP eCLIP19.13■□□□□ 0.65
SHC1-202ENST00000368445 FAM9BQ8IZU0 186 aa19.13■□□□□ 0.65
SHC1-202ENST00000368445 DENND4BO75064 1496 aaPredicted RBP19.13■□□□□ 0.65
SHC1-202ENST00000368445 C11orf95C9JLR9 678 aaPredicted RBP19.12■□□□□ 0.65
SHC1-202ENST00000368445 KIAA1107Q9UPP5 1409 aa19.1■□□□□ 0.65
SHC1-202ENST00000368445 GCC2Q8IWJ2 1684 aa19.09■□□□□ 0.65
SHC1-202ENST00000368445 ITSN2Q9NZM3 1697 aa19.09■□□□□ 0.65
SHC1-202ENST00000368445 SENP3-EIF4A1A0A087X0R7 540 aa19.08■□□□□ 0.65
SHC1-202ENST00000368445 NEFLP07196 543 aa19.08■□□□□ 0.65
SHC1-202ENST00000368445 OSCARQ8IYS5 282 aa19.08■□□□□ 0.65
SHC1-202ENST00000368445 ABCC10Q5T3U5 1492 aa19.08■□□□□ 0.64
SHC1-202ENST00000368445 RPRD2Q5VT52 1461 aaKnown RBP19.07■□□□□ 0.64
SHC1-202ENST00000368445 CCER2I3L3R5 266 aa19.07■□□□□ 0.64
SHC1-202ENST00000368445 SPAG9O60271 1321 aaKnown RBP19.07■□□□□ 0.64
SHC1-202ENST00000368445 MRS2Q9HD23 443 aa19.06■□□□□ 0.64
SHC1-202ENST00000368445 PZPP20742 1482 aa19.05■□□□□ 0.64
SHC1-202ENST00000368445 CCDC141Q6ZP82 1450 aa19.03■□□□□ 0.64
SHC1-202ENST00000368445 FKBP8Q14318 412 aa19.03■□□□□ 0.64
SHC1-202ENST00000368445 KIF7Q2M1P5 1343 aa19.01■□□□□ 0.63
SHC1-202ENST00000368445 ST20-MTHFSA0A0A6YYL1 179 aa19■□□□□ 0.63
SHC1-202ENST00000368445 KIF3BO15066 747 aa19■□□□□ 0.63
SHC1-202ENST00000368445 USP47Q96K76 1375 aa18.99■□□□□ 0.63
SHC1-202ENST00000368445 SYCP2Q9BX26 1530 aa18.99■□□□□ 0.63
SHC1-202ENST00000368445 CCDC7Q96M83 1385 aa18.99■□□□□ 0.63
SHC1-202ENST00000368445 CHGAP10645 457 aaKnown RBP18.98■□□□□ 0.63
SHC1-202ENST00000368445 CDC42BPAQ5VT25 1732 aa18.98■□□□□ 0.63
SHC1-202ENST00000368445 SUPT16HQ9Y5B9 1047 aaKnown RBP18.98■□□□□ 0.63
SHC1-202ENST00000368445 CCDC144AA2RUR9 1427 aa18.97■□□□□ 0.63
SHC1-202ENST00000368445 ABCC2Q92887 1545 aa18.97■□□□□ 0.63
SHC1-202ENST00000368445 PELP1Q8IZL8 1130 aaKnown RBP18.97■□□□□ 0.63
SHC1-202ENST00000368445 MBD5Q9P267 1494 aa18.97■□□□□ 0.63
SHC1-202ENST00000368445 ADGRL2O95490 1459 aa18.97■□□□□ 0.63
SHC1-202ENST00000368445 CCDC184Q52MB2 194 aa18.97■□□□□ 0.63
SHC1-202ENST00000368445 ROCK2O75116 1388 aaKnown RBP18.95■□□□□ 0.62
SHC1-202ENST00000368445 PLEKHH2Q8IVE3 1493 aa18.95■□□□□ 0.62
SHC1-202ENST00000368445 PRKRIP1Q9H875 184 aaPredicted RBP18.94■□□□□ 0.62
SHC1-202ENST00000368445 SENP3Q9H4L4 574 aaPredicted RBP18.94■□□□□ 0.62
SHC1-202ENST00000368445 ADCY10Q96PN6 1610 aa18.93■□□□□ 0.62
SHC1-202ENST00000368445 NBPF1Q3BBV0 1214 aa18.93■□□□□ 0.62
SHC1-202ENST00000368445 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.93■□□□□ 0.62
SHC1-202ENST00000368445 KDM5BQ9UGL1 1544 aa18.93■□□□□ 0.62
SHC1-202ENST00000368445 IRX6P78412 446 aaPredicted RBP18.92■□□□□ 0.62
SHC1-202ENST00000368445 TEX14Q8IWB6 1497 aa18.91■□□□□ 0.62
SHC1-202ENST00000368445 GGT6Q6P531 493 aa18.91■□□□□ 0.62
SHC1-202ENST00000368445 TTC37Q6PGP7 1564 aa18.91■□□□□ 0.62
SHC1-202ENST00000368445 CYB5RLQ6IPT4 315 aa18.91■□□□□ 0.62
SHC1-202ENST00000368445 PLCH2O75038 1416 aa18.91■□□□□ 0.62
SHC1-202ENST00000368445 SAMD9LQ8IVG5 1584 aa18.91■□□□□ 0.62
SHC1-202ENST00000368445 TRAPPC8Q9Y2L5 1435 aa18.9■□□□□ 0.62
SHC1-202ENST00000368445 SHANK2Q9UPX8 1470 aa18.89■□□□□ 0.61
SHC1-202ENST00000368445 SCAPERQ9BY12 1400 aa18.88■□□□□ 0.61
SHC1-202ENST00000368445 CNTLNQ9NXG0 1405 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms