RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 MYT1LQ9UL68 1186 aa6.52□□□□□ -1.37
ECHDC1-205ENST00000368295 WDR62O43379 1518 aa6.52□□□□□ -1.37
ECHDC1-205ENST00000368295 IRX5P78411 483 aaPredicted RBP6.5□□□□□ -1.37
ECHDC1-205ENST00000368295 PTGER2P43116 358 aa6.49□□□□□ -1.37
ECHDC1-205ENST00000368295 PDS5BQ9NTI5 1447 aa6.49□□□□□ -1.37
ECHDC1-205ENST00000368295 OCEL1Q9H607 264 aa6.48□□□□□ -1.37
ECHDC1-205ENST00000368295 SYNJ2O15056 1496 aa6.48□□□□□ -1.37
ECHDC1-205ENST00000368295 NUBP1P53384 320 aa6.47□□□□□ -1.37
ECHDC1-205ENST00000368295 GSE1Q14687 1217 aa6.47□□□□□ -1.37
ECHDC1-205ENST00000368295 LAMC3Q9Y6N6 1575 aa6.46□□□□□ -1.37
ECHDC1-205ENST00000368295 PKD2Q13563 968 aa6.46□□□□□ -1.37
ECHDC1-205ENST00000368295 CIZ1Q9ULV3 898 aaPredicted RBP6.46□□□□□ -1.37
ECHDC1-205ENST00000368295 ATAD2BQ9ULI0 1458 aa6.46□□□□□ -1.38
ECHDC1-205ENST00000368295 ECM2O94769 699 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-205ENST00000368295 FAM212AQ96EL1 285 aa6.45□□□□□ -1.38
ECHDC1-205ENST00000368295 PCDHB13Q9Y5F0 798 aa6.44□□□□□ -1.38
ECHDC1-205ENST00000368295 DCAF8Q5TAQ9 597 aa6.43□□□□□ -1.38
ECHDC1-205ENST00000368295 TMEM106CQ9BVX2 250 aa6.43□□□□□ -1.38
ECHDC1-205ENST00000368295 C3orf67Q6ZVT6 689 aa6.42□□□□□ -1.38
ECHDC1-205ENST00000368295 ZNF608Q9ULD9 1512 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-205ENST00000368295 RASEFQ8IZ41 740 aa6.41□□□□□ -1.38
ECHDC1-205ENST00000368295 SPATA31D1Q6ZQQ2 1576 aa6.4□□□□□ -1.39
ECHDC1-205ENST00000368295 RSF1Q96T23 1441 aaPredicted RBP6.39□□□□□ -1.39
ECHDC1-205ENST00000368295 ADGRL1O94910 1474 aa6.38□□□□□ -1.39
ECHDC1-205ENST00000368295 L3MBTL3Q96JM7 780 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-205ENST00000368295 IRX2Q9BZI1 471 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-205ENST00000368295 HMGXB3Q12766 1538 aa6.37□□□□□ -1.39
ECHDC1-205ENST00000368295 ERBB3P21860 1342 aa6.37□□□□□ -1.39
ECHDC1-205ENST00000368295 PLA2G2EQ9NZK7 142 aa6.36□□□□□ -1.39
ECHDC1-205ENST00000368295 SMARCA4P51532 1647 aa6.36□□□□□ -1.39
ECHDC1-205ENST00000368295 CHD1O14646 1710 aa6.35□□□□□ -1.39
ECHDC1-205ENST00000368295 RGL2O15211 777 aa6.35□□□□□ -1.39
ECHDC1-205ENST00000368295 CHRM1P11229 460 aaPredicted RBP6.35□□□□□ -1.39
ECHDC1-205ENST00000368295 HOXB1P14653 301 aaPredicted RBP6.35□□□□□ -1.39
ECHDC1-205ENST00000368295 IFNL1Q8IU54 200 aa6.34□□□□□ -1.39
ECHDC1-205ENST00000368295 BAZ1BQ9UIG0 1483 aaKnown RBP6.33□□□□□ -1.4
ECHDC1-205ENST00000368295 CEP164Q9UPV0 1460 aa6.33□□□□□ -1.4
ECHDC1-205ENST00000368295 CADPSQ9ULU8 1353 aa6.33□□□□□ -1.4
ECHDC1-205ENST00000368295 ARXQ96QS3 562 aa6.33□□□□□ -1.4
ECHDC1-205ENST00000368295 TAOK2Q9UL54 1235 aa6.33□□□□□ -1.4
ECHDC1-205ENST00000368295 URB2Q14146 1524 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-205ENST00000368295 RIOK3O14730 519 aaKnown RBP6.31□□□□□ -1.4
ECHDC1-205ENST00000368295 PYGBP11216 843 aa6.31□□□□□ -1.4
ECHDC1-205ENST00000368295 ZNF710Q8N1W2 664 aa6.31□□□□□ -1.4
ECHDC1-205ENST00000368295 KIF13AQ9H1H9 1805 aa6.3□□□□□ -1.4
ECHDC1-205ENST00000368295 TTBK1Q5TCY1 1321 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-205ENST00000368295 FANCD2Q9BXW9 1451 aa6.29□□□□□ -1.4
ECHDC1-205ENST00000368295 GAPVD1Q14C86 1478 aa6.28□□□□□ -1.4
ECHDC1-205ENST00000368295 RGS20O76081 388 aa6.28□□□□□ -1.4
ECHDC1-205ENST00000368295 ZNF687Q8N1G0 1237 aa6.28□□□□□ -1.4
ECHDC1-205ENST00000368295 RNF25Q96BH1 459 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-205ENST00000368295 KDM6BO15054 1643 aa6.28□□□□□ -1.4
ECHDC1-205ENST00000368295 VGFO15240 615 aaPredicted RBP6.27□□□□□ -1.4
ECHDC1-205ENST00000368295 FAM69CQ0P6D2 419 aa6.27□□□□□ -1.4
ECHDC1-205ENST00000368295 DOK7Q18PE1 504 aa6.27□□□□□ -1.4
ECHDC1-205ENST00000368295 ZNF467Q7Z7K2 595 aaPredicted RBP6.27□□□□□ -1.4
ECHDC1-205ENST00000368295 HOXB3P14651 431 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-205ENST00000368295 VARS2Q5ST30 1063 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-205ENST00000368295 EIF4G3O43432 1585 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-205ENST00000368295 AQRO60306 1485 aaKnown RBP eCLIP6.26□□□□□ -1.41
ECHDC1-205ENST00000368295 ZCCHC6Q5VYS8 1495 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-205ENST00000368295 PDCD7Q8N8D1 485 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-205ENST00000368295 CLASP1Q7Z460 1538 aa6.25□□□□□ -1.41
ECHDC1-205ENST00000368295 HS6ST3Q8IZP7 471 aa6.25□□□□□ -1.41
ECHDC1-205ENST00000368295 CERKQ8TCT0 537 aa6.25□□□□□ -1.41
ECHDC1-205ENST00000368295 HCSTQ9UBK5 93 aa6.25□□□□□ -1.41
ECHDC1-205ENST00000368295 RIMBP2O15034 1052 aa6.24□□□□□ -1.41
ECHDC1-205ENST00000368295 CHGAP10645 457 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-205ENST00000368295 BBXQ8WY36 941 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-205ENST00000368295 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-205ENST00000368295 DCAF1Q9Y4B6 1507 aa6.23□□□□□ -1.41
ECHDC1-205ENST00000368295 PDAP1Q13442 181 aaKnown RBP6.22□□□□□ -1.41
ECHDC1-205ENST00000368295 IFT140Q96RY7 1462 aa6.22□□□□□ -1.41
ECHDC1-205ENST00000368295 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.21□□□□□ -1.42
ECHDC1-205ENST00000368295 STK25O00506 426 aa6.21□□□□□ -1.42
ECHDC1-205ENST00000368295 ZFP91Q96JP5 570 aaPredicted RBP6.21□□□□□ -1.42
ECHDC1-205ENST00000368295 PCDHB8Q9UN66 801 aa6.21□□□□□ -1.42
ECHDC1-205ENST00000368295 ANKRD13DQ6ZTN6 518 aa6.19□□□□□ -1.42
ECHDC1-205ENST00000368295 STK24Q9Y6E0 443 aa6.19□□□□□ -1.42
ECHDC1-205ENST00000368295 PSEN1P49768 467 aa6.18□□□□□ -1.42
ECHDC1-205ENST00000368295 PLCB2Q00722 1185 aa6.18□□□□□ -1.42
ECHDC1-205ENST00000368295 MYT1Q01538 1121 aa6.18□□□□□ -1.42
ECHDC1-205ENST00000368295 MKRN3Q13064 507 aaKnown RBP6.18□□□□□ -1.42
ECHDC1-205ENST00000368295 BCL11BQ9C0K0 894 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-205ENST00000368295 ZSWIM6Q9HCJ5 1215 aa6.18□□□□□ -1.42
ECHDC1-205ENST00000368295 GOLGA2Q08379 1002 aa6.18□□□□□ -1.42
ECHDC1-205ENST00000368295 TSPOAP1O95153 1857 aa6.17□□□□□ -1.42
ECHDC1-205ENST00000368295 PRKCSHP14314 528 aaPredicted RBP6.17□□□□□ -1.42
ECHDC1-205ENST00000368295 G3V3G9 751 aa6.17□□□□□ -1.42
ECHDC1-205ENST00000368295 ABCC10Q5T3U5 1492 aa6.16□□□□□ -1.42
ECHDC1-205ENST00000368295 BCANQ96GW7 911 aa6.16□□□□□ -1.42
ECHDC1-205ENST00000368295 PAXIP1Q6ZW49 1069 aaPredicted RBP6.15□□□□□ -1.43
ECHDC1-205ENST00000368295 HSPA2P54652 639 aa6.14□□□□□ -1.43
ECHDC1-205ENST00000368295 SPRYD3Q8NCJ5 442 aa6.14□□□□□ -1.43
ECHDC1-205ENST00000368295 CHMP7Q8WUX9 453 aaPredicted RBP6.14□□□□□ -1.43
ECHDC1-205ENST00000368295 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.14□□□□□ -1.433e-7■■□□□ 13.1
ECHDC1-205ENST00000368295 LSM11P83369 360 aaKnown RBP eCLIP6.13□□□□□ -1.43
ECHDC1-205ENST00000368295 CFAP44Q96MT7 982 aa6.13□□□□□ -1.43
ECHDC1-205ENST00000368295 SYNJ1O43426 1573 aa6.13□□□□□ -1.43
ECHDC1-205ENST00000368295 DIP2BQ9P265 1576 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms