RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 B4GALNT3Q6L9W6 998 aa17.21■□□□□ 0.35
PTPRK-204ENST00000368210 GGT6Q6P531 493 aa17.2■□□□□ 0.34
PTPRK-204ENST00000368210 FGD5Q6ZNL6 1462 aa17.2■□□□□ 0.34
PTPRK-204ENST00000368210 HNRNPMP52272 730 aaKnown RBP eCLIP17.2■□□□□ 0.342e-6■■■□□ 18
PTPRK-204ENST00000368210 NCAPD3P42695 1498 aa17.2■□□□□ 0.34
PTPRK-204ENST00000368210 ZBTB7CA1YPR0 619 aa17.19■□□□□ 0.34
PTPRK-204ENST00000368210 PLEKHG5O94827 1062 aa17.19■□□□□ 0.34
PTPRK-204ENST00000368210 FTSJ3Q8IY81 847 aaKnown RBP17.19■□□□□ 0.34
PTPRK-204ENST00000368210 ROCK2O75116 1388 aaKnown RBP17.17■□□□□ 0.34
PTPRK-204ENST00000368210 RSPH4AQ5TD94 716 aa17.17■□□□□ 0.34
PTPRK-204ENST00000368210 BECN1Q14457 450 aa17.15■□□□□ 0.34
PTPRK-204ENST00000368210 FRAT1Q92837 279 aaPredicted RBP17.15■□□□□ 0.34
PTPRK-204ENST00000368210 KTN1Q86UP2 1357 aaKnown RBP17.15■□□□□ 0.34
PTPRK-204ENST00000368210 U2SURPO15042 1029 aaKnown RBP17.15■□□□□ 0.34
PTPRK-204ENST00000368210 RSPH6AQ9H0K4 717 aa17.14■□□□□ 0.33
PTPRK-204ENST00000368210 LAS1LQ9Y4W2 734 aaKnown RBP17.13■□□□□ 0.33
PTPRK-204ENST00000368210 VSIG10Q8N0Z9 540 aa17.13■□□□□ 0.33
PTPRK-204ENST00000368210 RAD54L2Q9Y4B4 1467 aa17.12■□□□□ 0.33
PTPRK-204ENST00000368210 SRPK2P78362 688 aaKnown RBP17.12■□□□□ 0.33
PTPRK-204ENST00000368210 MORC1Q86VD1 984 aa17.12■□□□□ 0.33
PTPRK-204ENST00000368210 PKNOX2Q96KN3 472 aa17.12■□□□□ 0.33
PTPRK-204ENST00000368210 RALBP1Q15311 655 aa17.11■□□□□ 0.33
PTPRK-204ENST00000368210 GAPVD1Q14C86 1478 aa17.11■□□□□ 0.33
PTPRK-204ENST00000368210 RGS3P49796 1198 aa17.11■□□□□ 0.33
PTPRK-204ENST00000368210 SAFB2Q14151 953 aaKnown RBP eCLIP17.11■□□□□ 0.33
PTPRK-204ENST00000368210 MLECQ14165 292 aa17.1■□□□□ 0.33
PTPRK-204ENST00000368210 KIF3BO15066 747 aa17.1■□□□□ 0.33
PTPRK-204ENST00000368210 KIF21BO75037 1637 aa17.1■□□□□ 0.33
PTPRK-204ENST00000368210 SPAG9O60271 1321 aaKnown RBP17.08■□□□□ 0.32
PTPRK-204ENST00000368210 PNNQ9H307 717 aaKnown RBP17.07■□□□□ 0.32
PTPRK-204ENST00000368210 MS4A1P11836 297 aa17.06■□□□□ 0.32
PTPRK-204ENST00000368210 HDGFP51858 240 aaKnown RBP17.06■□□□□ 0.32
PTPRK-204ENST00000368210 STK26Q9P289 416 aa17.05■□□□□ 0.32
PTPRK-204ENST00000368210 PODXL2Q9NZ53 605 aa17.05■□□□□ 0.32
PTPRK-204ENST00000368210 L1TD1Q5T7N2 865 aaKnown RBP17.05■□□□□ 0.32
PTPRK-204ENST00000368210 HSP90AA2PQ14568 343 aaPredicted RBP17.04■□□□□ 0.32
PTPRK-204ENST00000368210 PTPRGP23470 1445 aa17.03■□□□□ 0.32
PTPRK-204ENST00000368210 SYNJ1O43426 1573 aa17.02■□□□□ 0.31
PTPRK-204ENST00000368210 PHLDB1Q86UU1 1377 aa17.01■□□□□ 0.31
PTPRK-204ENST00000368210 CHMP4BQ9H444 224 aaKnown RBP17.01■□□□□ 0.31
PTPRK-204ENST00000368210 RCAN3Q9UKA8 241 aa17.01■□□□□ 0.31
PTPRK-204ENST00000368210 FGD6Q6ZV73 1430 aa17.01■□□□□ 0.31
PTPRK-204ENST00000368210 CFTRP13569 1480 aa17.01■□□□□ 0.31
PTPRK-204ENST00000368210 NLRP13Q86W25 1043 aa17■□□□□ 0.31
PTPRK-204ENST00000368210 ST20-MTHFSA0A0A6YYL1 179 aa16.99■□□□□ 0.31
PTPRK-204ENST00000368210 A0A0G2JS52 829 aa16.99■□□□□ 0.31
PTPRK-204ENST00000368210 LMOD2Q6P5Q4 547 aa16.99■□□□□ 0.31
PTPRK-204ENST00000368210 LRRC9Q6ZRR7 1453 aa16.99■□□□□ 0.31
PTPRK-204ENST00000368210 EIF3AQ14152 1382 aaKnown RBP16.98■□□□□ 0.31
PTPRK-204ENST00000368210 ERICH3Q5RHP9 1530 aa16.98■□□□□ 0.31
PTPRK-204ENST00000368210 ANO8Q9HCE9 1232 aaPredicted RBP16.98■□□□□ 0.31
PTPRK-204ENST00000368210 HDGFL2Q7Z4V5 671 aaPredicted RBP16.97■□□□□ 0.31
PTPRK-204ENST00000368210 CCDC144AA2RUR9 1427 aa16.97■□□□□ 0.31
PTPRK-204ENST00000368210 MYOM3Q5VTT5 1437 aa16.97■□□□□ 0.31
PTPRK-204ENST00000368210 ARAP1Q96P48 1450 aa16.97■□□□□ 0.31
PTPRK-204ENST00000368210 U2AF1L5P0DN76 240 aaPredicted RBP16.95■□□□□ 0.3
PTPRK-204ENST00000368210 HAP1P54257 671 aaPredicted RBP16.95■□□□□ 0.3
PTPRK-204ENST00000368210 U2AF1Q01081 240 aaKnown RBP eCLIP16.95■□□□□ 0.3
PTPRK-204ENST00000368210 CASC1Q6TDU7 716 aa16.95■□□□□ 0.3
PTPRK-204ENST00000368210 SOX12O15370 315 aa16.95■□□□□ 0.3
PTPRK-204ENST00000368210 GOLGA6L22H0YM25 854 aa16.94■□□□□ 0.3
PTPRK-204ENST00000368210 WASHC2CQ9Y4E1 1318 aa16.94■□□□□ 0.3
PTPRK-204ENST00000368210 PRKRIP1Q9H875 184 aaPredicted RBP16.94■□□□□ 0.3
PTPRK-204ENST00000368210 AQRO60306 1485 aaKnown RBP eCLIP16.94■□□□□ 0.39e-8■■■■■ 30.5
PTPRK-204ENST00000368210 CASKIN1Q8WXD9 1431 aa16.94■□□□□ 0.3
PTPRK-204ENST00000368210 ZNF644Q9H582 1327 aaPredicted RBP16.93■□□□□ 0.3
PTPRK-204ENST00000368210 DNTTIP2Q5QJE6 756 aaKnown RBP16.92■□□□□ 0.3
PTPRK-204ENST00000368210 PRXQ9BXM0 1461 aa16.92■□□□□ 0.3
PTPRK-204ENST00000368210 KIF15Q9NS87 1388 aa16.91■□□□□ 0.3
PTPRK-204ENST00000368210 CUX1P39880 1505 aa16.91■□□□□ 0.3
PTPRK-204ENST00000368210 UACAQ9BZF9 1416 aa16.91■□□□□ 0.3
PTPRK-204ENST00000368210 USP47Q96K76 1375 aa16.9■□□□□ 0.3
PTPRK-204ENST00000368210 PDE3BQ13370 1112 aa16.9■□□□□ 0.3
PTPRK-204ENST00000368210 TRHP20396 242 aaPredicted RBP16.89■□□□□ 0.29
PTPRK-204ENST00000368210 USP35Q9P2H5 1018 aa16.89■□□□□ 0.29
PTPRK-204ENST00000368210 AMER1Q5JTC6 1135 aaPredicted RBP16.89■□□□□ 0.29
PTPRK-204ENST00000368210 MYBBP1AQ9BQG0 1328 aaKnown RBP16.88■□□□□ 0.29
PTPRK-204ENST00000368210 GOLGA2Q08379 1002 aa16.88■□□□□ 0.29
PTPRK-204ENST00000368210 PANK3Q9H999 370 aa16.88■□□□□ 0.29
PTPRK-204ENST00000368210 NCOA2Q15596 1464 aa16.87■□□□□ 0.29
PTPRK-204ENST00000368210 TOP2BQ02880 1626 aa16.87■□□□□ 0.29
PTPRK-204ENST00000368210 NUTM2DQ5VT03 806 aaPredicted RBP16.87■□□□□ 0.29
PTPRK-204ENST00000368210 RRBP1Q9P2E9 1410 aaKnown RBP16.87■□□□□ 0.29
PTPRK-204ENST00000368210 TRAK1Q9UPV9 953 aa16.86■□□□□ 0.29
PTPRK-204ENST00000368210 TERF2IPQ9NYB0 399 aa16.86■□□□□ 0.29
PTPRK-204ENST00000368210 PTMAP06454 111 aaKnown RBP16.86■□□□□ 0.29
PTPRK-204ENST00000368210 IPO8O15397 1037 aaKnown RBP16.86■□□□□ 0.29
PTPRK-204ENST00000368210 FANCIQ9NVI1 1328 aa16.85■□□□□ 0.29
PTPRK-204ENST00000368210 HMGXB3Q12766 1538 aa16.85■□□□□ 0.29
PTPRK-204ENST00000368210 FYCO1Q9BQS8 1478 aa16.85■□□□□ 0.29
PTPRK-204ENST00000368210 TCERG1O14776 1098 aaKnown RBP16.83■□□□□ 0.29
PTPRK-204ENST00000368210 MSNP26038 577 aaKnown RBP16.83■□□□□ 0.29
PTPRK-204ENST00000368210 CCDC146Q8IYE0 955 aa16.83■□□□□ 0.29
PTPRK-204ENST00000368210 GRIN2BQ13224 1484 aa16.83■□□□□ 0.28
PTPRK-204ENST00000368210 NESP48681 1621 aa16.83■□□□□ 0.28
PTPRK-204ENST00000368210 RTF1Q92541 710 aaKnown RBP16.83■□□□□ 0.28
PTPRK-204ENST00000368210 CALD1Q05682 793 aaKnown RBP16.82■□□□□ 0.28
PTPRK-204ENST00000368210 IPO9Q96P70 1041 aaKnown RBP16.82■□□□□ 0.28
PTPRK-204ENST00000368210 A0A0U1RQG5 324 aaPredicted RBP16.8■□□□□ 0.28
PTPRK-204ENST00000368210 OS9Q13438 667 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms