RNA–Protein interactions for RNA: ENST00000366525.8

HNRNPU-202, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,851 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-202ENST00000366525 MS4A1P11836 297 aa13.05□□□□□ -0.32
HNRNPU-202ENST00000366525 RRP1P56182 461 aaKnown RBP13.05□□□□□ -0.32
HNRNPU-202ENST00000366525 SLC4A3P48751 1232 aa13.04□□□□□ -0.32
HNRNPU-202ENST00000366525 CASKIN1Q8WXD9 1431 aa13.04□□□□□ -0.32
HNRNPU-202ENST00000366525 ABCA5Q8WWZ7 1642 aa13.04□□□□□ -0.32
HNRNPU-202ENST00000366525 FOXD1Q16676 465 aa13.03□□□□□ -0.32
HNRNPU-202ENST00000366525 DHX29Q7Z478 1369 aaKnown RBP13.03□□□□□ -0.32
HNRNPU-202ENST00000366525 SKAP1Q86WV1 359 aa13.03□□□□□ -0.32
HNRNPU-202ENST00000366525 DDRGK1Q96HY6 314 aa13.03□□□□□ -0.32
HNRNPU-202ENST00000366525 RSPH6AQ9H0K4 717 aa13.03□□□□□ -0.32
HNRNPU-202ENST00000366525 MTUS2Q5JR59 1369 aa13.02□□□□□ -0.32
HNRNPU-202ENST00000366525 POLR1AO95602 1720 aaPredicted RBP13.02□□□□□ -0.32
HNRNPU-202ENST00000366525 CHIC2Q9UKJ5 165 aa13.02□□□□□ -0.33
HNRNPU-202ENST00000366525 FGD5Q6ZNL6 1462 aa13.02□□□□□ -0.33
HNRNPU-202ENST00000366525 POLR3GLQ9BT43 218 aa13.02□□□□□ -0.33
HNRNPU-202ENST00000366525 PNISRQ8TF01 805 aaKnown RBP13.01□□□□□ -0.33
HNRNPU-202ENST00000366525 SPATA31E1Q6ZUB1 1445 aa13.01□□□□□ -0.33
HNRNPU-202ENST00000366525 HECW1Q76N89 1606 aa13□□□□□ -0.33
HNRNPU-202ENST00000366525 PKNOX2Q96KN3 472 aa13□□□□□ -0.33
HNRNPU-202ENST00000366525 MPHOSPH9Q99550 1183 aa12.99□□□□□ -0.33
HNRNPU-202ENST00000366525 FAM43AQ8N2R8 423 aa12.99□□□□□ -0.33
HNRNPU-202ENST00000366525 DCAF11Q8TEB1 546 aa12.99□□□□□ -0.33
HNRNPU-202ENST00000366525 MYOM3Q5VTT5 1437 aa12.98□□□□□ -0.33
HNRNPU-202ENST00000366525 KDM6BO15054 1643 aa12.98□□□□□ -0.33
HNRNPU-202ENST00000366525 TMC1Q8TDI8 760 aa12.98□□□□□ -0.33
HNRNPU-202ENST00000366525 RCAN3Q9UKA8 241 aa12.98□□□□□ -0.33
HNRNPU-202ENST00000366525 FRAT2O75474 233 aaPredicted RBP12.95□□□□□ -0.34
HNRNPU-202ENST00000366525 DAXXQ9UER7 740 aaPredicted RBP12.95□□□□□ -0.34
HNRNPU-202ENST00000366525 GCC2Q8IWJ2 1684 aa12.94□□□□□ -0.34
HNRNPU-202ENST00000366525 EFCAB5A4FU69 1503 aa12.94□□□□□ -0.34
HNRNPU-202ENST00000366525 CFTRP13569 1480 aa12.93□□□□□ -0.34
HNRNPU-202ENST00000366525 TEX14Q8IWB6 1497 aa12.93□□□□□ -0.34
HNRNPU-202ENST00000366525 SNAPC4Q5SXM2 1469 aa12.93□□□□□ -0.34
HNRNPU-202ENST00000366525 PLIN1O60240 522 aa12.92□□□□□ -0.34
HNRNPU-202ENST00000366525 BCORL1Q5H9F3 1711 aa12.92□□□□□ -0.34
HNRNPU-202ENST00000366525 LRPPRCP42704 1394 aaKnown RBP12.92□□□□□ -0.34
HNRNPU-202ENST00000366525 RPRD2Q5VT52 1461 aaKnown RBP12.91□□□□□ -0.34
HNRNPU-202ENST00000366525 LRRIQ1Q96JM4 1722 aa12.91□□□□□ -0.34
HNRNPU-202ENST00000366525 ANKRD30BQ9BXX2 1392 aa12.9□□□□□ -0.34
HNRNPU-202ENST00000366525 SUPT6HQ7KZ85 1726 aaKnown RBP12.9□□□□□ -0.35
HNRNPU-202ENST00000366525 MIA2Q96PC5 1412 aa12.89□□□□□ -0.35
HNRNPU-202ENST00000366525 CRBNQ96SW2 442 aa12.89□□□□□ -0.35
HNRNPU-202ENST00000366525 RRAGDQ9NQL2 400 aaPredicted RBP12.89□□□□□ -0.35
HNRNPU-202ENST00000366525 CDCA7LQ96GN5 454 aa12.88□□□□□ -0.35
HNRNPU-202ENST00000366525 USP47Q96K76 1375 aa12.88□□□□□ -0.35
HNRNPU-202ENST00000366525 ZNF326Q5BKZ1 582 aaKnown RBP12.86□□□□□ -0.35
HNRNPU-202ENST00000366525 UGGT2Q9NYU1 1516 aa12.85□□□□□ -0.35
HNRNPU-202ENST00000366525 GLIPR1L2Q4G1C9 344 aa12.85□□□□□ -0.35
HNRNPU-202ENST00000366525 VSIG10Q8N0Z9 540 aa12.85□□□□□ -0.35
HNRNPU-202ENST00000366525 BRD4O60885 1362 aaPredicted RBP12.85□□□□□ -0.35
HNRNPU-202ENST00000366525 EHBP1L1Q8N3D4 1523 aa12.84□□□□□ -0.35
HNRNPU-202ENST00000366525 POGKQ9P215 609 aa12.84□□□□□ -0.35
HNRNPU-202ENST00000366525 C8orf34Q49A92 452 aa12.84□□□□□ -0.35
HNRNPU-202ENST00000366525 MYBBP1AQ9BQG0 1328 aaKnown RBP12.84□□□□□ -0.35
HNRNPU-202ENST00000366525 HMGXB3Q12766 1538 aa12.84□□□□□ -0.35
HNRNPU-202ENST00000366525 TCOF1Q13428 1488 aaKnown RBP12.83□□□□□ -0.35
HNRNPU-202ENST00000366525 KIF15Q9NS87 1388 aa12.83□□□□□ -0.35
HNRNPU-202ENST00000366525 ZMYND15Q9H091 742 aa12.83□□□□□ -0.35
HNRNPU-202ENST00000366525 CTTNBP2Q8WZ74 1663 aa12.83□□□□□ -0.36
HNRNPU-202ENST00000366525 PDE3BQ13370 1112 aa12.83□□□□□ -0.36
HNRNPU-202ENST00000366525 FAM161AQ3B820 660 aa12.83□□□□□ -0.36
HNRNPU-202ENST00000366525 C20orf194Q5TEA3 1177 aa12.82□□□□□ -0.36
HNRNPU-202ENST00000366525 GRIN2BQ13224 1484 aa12.82□□□□□ -0.36
HNRNPU-202ENST00000366525 MAGI3Q5TCQ9 1506 aa12.82□□□□□ -0.36
HNRNPU-202ENST00000366525 SLC4A1APQ9BWU0 796 aaKnown RBP12.82□□□□□ -0.36
HNRNPU-202ENST00000366525 KDM2BQ8NHM5 1336 aa12.82□□□□□ -0.36
HNRNPU-202ENST00000366525 ARHGEF11O15085 1522 aa12.81□□□□□ -0.36
HNRNPU-202ENST00000366525 PRDM2Q13029 1718 aa12.8□□□□□ -0.36
HNRNPU-202ENST00000366525 ARID4BQ4LE39 1312 aaPredicted RBP12.8□□□□□ -0.36
HNRNPU-202ENST00000366525 KTN1Q86UP2 1357 aaKnown RBP12.8□□□□□ -0.36
HNRNPU-202ENST00000366525 KDM5CP41229 1560 aa12.8□□□□□ -0.36
HNRNPU-202ENST00000366525 ROCK2O75116 1388 aaKnown RBP12.79□□□□□ -0.36
HNRNPU-202ENST00000366525 RALBP1Q15311 655 aa12.79□□□□□ -0.36
HNRNPU-202ENST00000366525 NAP1L5Q96NT1 182 aaPredicted RBP12.78□□□□□ -0.36
HNRNPU-202ENST00000366525 MBD5Q9P267 1494 aa12.77□□□□□ -0.36
HNRNPU-202ENST00000366525 RGS3P49796 1198 aa12.77□□□□□ -0.36
HNRNPU-202ENST00000366525 CENPQQ7L2Z9 268 aaPredicted RBP12.77□□□□□ -0.36
HNRNPU-202ENST00000366525 ARXQ96QS3 562 aa12.76□□□□□ -0.37
HNRNPU-202ENST00000366525 HSP90AA2PQ14568 343 aaPredicted RBP12.75□□□□□ -0.37
HNRNPU-202ENST00000366525 THOC2Q8NI27 1593 aaKnown RBP12.75□□□□□ -0.37
HNRNPU-202ENST00000366525 RAD54L2Q9Y4B4 1467 aa12.75□□□□□ -0.37
HNRNPU-202ENST00000366525 NLRP13Q86W25 1043 aa12.75□□□□□ -0.37
HNRNPU-202ENST00000366525 L1TD1Q5T7N2 865 aaKnown RBP12.75□□□□□ -0.37
HNRNPU-202ENST00000366525 KIF14Q15058 1648 aa12.74□□□□□ -0.37
HNRNPU-202ENST00000366525 SAMD9Q5K651 1589 aa12.74□□□□□ -0.37
HNRNPU-202ENST00000366525 PNNQ9H307 717 aaKnown RBP12.73□□□□□ -0.37
HNRNPU-202ENST00000366525 ST20-MTHFSA0A0A6YYL1 179 aa12.72□□□□□ -0.37
HNRNPU-202ENST00000366525 HSP90AA1P07900 732 aaKnown RBP12.72□□□□□ -0.37
HNRNPU-202ENST00000366525 CARD11Q9BXL7 1154 aa12.72□□□□□ -0.37
HNRNPU-202ENST00000366525 SLKQ9H2G2 1235 aaPredicted RBP12.72□□□□□ -0.37
HNRNPU-202ENST00000366525 CC2D2AQ9P2K1 1620 aa12.71□□□□□ -0.37
HNRNPU-202ENST00000366525 CUL7Q14999 1698 aa12.71□□□□□ -0.37
HNRNPU-202ENST00000366525 RRP9O43818 475 aaKnown RBP12.71□□□□□ -0.37
HNRNPU-202ENST00000366525 DAPK1P53355 1430 aa12.7□□□□□ -0.38
HNRNPU-202ENST00000366525 XRCC6P12956 609 aaKnown RBP eCLIP12.7□□□□□ -0.38
HNRNPU-202ENST00000366525 PZPP20742 1482 aa12.7□□□□□ -0.38
HNRNPU-202ENST00000366525 USP19O94966 1318 aa12.7□□□□□ -0.38
HNRNPU-202ENST00000366525 PARD3Q8TEW0 1356 aa12.7□□□□□ -0.38
HNRNPU-202ENST00000366525 E9PCH4 1651 aa12.7□□□□□ -0.38
HNRNPU-202ENST00000366525 ROCK1Q13464 1354 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms