RNA–Protein interactions for RNA: ENST00000366497.6

NLRP3-204, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-204ENST00000366497 KANK1Q14678 1352 aa11.86□□□□□ -0.51
NLRP3-204ENST00000366497 BIVM-ERCC5R4GMW8 1640 aa11.86□□□□□ -0.51
NLRP3-204ENST00000366497 GGT6Q6P531 493 aa11.86□□□□□ -0.51
NLRP3-204ENST00000366497 TIAM1Q13009 1591 aa11.86□□□□□ -0.51
NLRP3-204ENST00000366497 IFT140Q96RY7 1462 aa11.86□□□□□ -0.51
NLRP3-204ENST00000366497 CC2D1BQ5T0F9 858 aaKnown RBP11.86□□□□□ -0.51
NLRP3-204ENST00000366497 LAMC3Q9Y6N6 1575 aa11.86□□□□□ -0.51
NLRP3-204ENST00000366497 TMF1P82094 1093 aa11.85□□□□□ -0.51
NLRP3-204ENST00000366497 UACAQ9BZF9 1416 aa11.85□□□□□ -0.51
NLRP3-204ENST00000366497 BCL11AQ9H165 835 aa11.84□□□□□ -0.51
NLRP3-204ENST00000366497 SPAG9O60271 1321 aaKnown RBP11.84□□□□□ -0.51
NLRP3-204ENST00000366497 KIF3BO15066 747 aa11.84□□□□□ -0.51
NLRP3-204ENST00000366497 ROCK2O75116 1388 aaKnown RBP11.83□□□□□ -0.52
NLRP3-204ENST00000366497 SLC24A1O60721 1099 aa11.83□□□□□ -0.52
NLRP3-204ENST00000366497 ANP32AP39687 249 aaKnown RBP11.83□□□□□ -0.52
NLRP3-204ENST00000366497 NPM2Q86SE8 214 aaKnown RBP11.83□□□□□ -0.52
NLRP3-204ENST00000366497 URB2Q14146 1524 aaKnown RBP11.82□□□□□ -0.52
NLRP3-204ENST00000366497 PRDM2Q13029 1718 aa11.81□□□□□ -0.52
NLRP3-204ENST00000366497 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.8□□□□□ -0.52
NLRP3-204ENST00000366497 SNAPC4Q5SXM2 1469 aa11.8□□□□□ -0.52
NLRP3-204ENST00000366497 ARID4BQ4LE39 1312 aaPredicted RBP11.8□□□□□ -0.52
NLRP3-204ENST00000366497 ZBTB47Q9UFB7 747 aaPredicted RBP11.79□□□□□ -0.52
NLRP3-204ENST00000366497 ST20-MTHFSA0A0A6YYL1 179 aa11.77□□□□□ -0.52
NLRP3-204ENST00000366497 TNNT2P45379 298 aaPredicted RBP11.77□□□□□ -0.53
NLRP3-204ENST00000366497 MLECQ14165 292 aa11.76□□□□□ -0.53
NLRP3-204ENST00000366497 PRG4Q92954 1404 aaPredicted RBP11.76□□□□□ -0.53
NLRP3-204ENST00000366497 PCF11O94913 1555 aaKnown RBP11.76□□□□□ -0.53
NLRP3-204ENST00000366497 POGKQ9P215 609 aa11.76□□□□□ -0.53
NLRP3-204ENST00000366497 KIF15Q9NS87 1388 aa11.75□□□□□ -0.53
NLRP3-204ENST00000366497 EHBP1L1Q8N3D4 1523 aa11.75□□□□□ -0.53
NLRP3-204ENST00000366497 KIAA0586Q9BVV6 1533 aa11.75□□□□□ -0.53
NLRP3-204ENST00000366497 HFM1A2PYH4 1435 aa11.75□□□□□ -0.53
NLRP3-204ENST00000366497 CCDC144AA2RUR9 1427 aa11.75□□□□□ -0.53
NLRP3-204ENST00000366497 ANKRD50Q9ULJ7 1429 aa11.75□□□□□ -0.53
NLRP3-204ENST00000366497 CFAP53Q96M91 514 aa11.74□□□□□ -0.53
NLRP3-204ENST00000366497 NEUROD2Q15784 382 aa11.74□□□□□ -0.53
NLRP3-204ENST00000366497 PPP4R2Q9NY27 417 aa11.74□□□□□ -0.53
NLRP3-204ENST00000366497 CUL7Q14999 1698 aa11.74□□□□□ -0.53
NLRP3-204ENST00000366497 MIA2Q96PC5 1412 aa11.74□□□□□ -0.53
NLRP3-204ENST00000366497 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.74□□□□□ -0.53
NLRP3-204ENST00000366497 SAFB2Q14151 953 aaKnown RBP eCLIP11.73□□□□□ -0.53
NLRP3-204ENST00000366497 EPRSP07814 1512 aaKnown RBP11.73□□□□□ -0.53
NLRP3-204ENST00000366497 CDK13Q14004 1512 aaKnown RBP11.73□□□□□ -0.53
NLRP3-204ENST00000366497 KTN1Q86UP2 1357 aaKnown RBP11.73□□□□□ -0.53
NLRP3-204ENST00000366497 TROQ12816 1431 aaPredicted RBP11.72□□□□□ -0.53
NLRP3-204ENST00000366497 OSCARQ8IYS5 282 aa11.72□□□□□ -0.53
NLRP3-204ENST00000366497 PRKRIP1Q9H875 184 aaPredicted RBP11.72□□□□□ -0.53
NLRP3-204ENST00000366497 MAP3K1Q13233 1512 aa11.72□□□□□ -0.53
NLRP3-204ENST00000366497 B4GALNT3Q6L9W6 998 aa11.72□□□□□ -0.53
NLRP3-204ENST00000366497 USP47Q96K76 1375 aa11.72□□□□□ -0.53
NLRP3-204ENST00000366497 PPM1GO15355 546 aaPredicted RBP11.72□□□□□ -0.53
NLRP3-204ENST00000366497 RALBP1Q15311 655 aa11.72□□□□□ -0.53
NLRP3-204ENST00000366497 IQGAP2Q13576 1575 aa11.72□□□□□ -0.53
NLRP3-204ENST00000366497 ZNF608Q9ULD9 1512 aaPredicted RBP11.71□□□□□ -0.53
NLRP3-204ENST00000366497 TRHP20396 242 aaPredicted RBP11.71□□□□□ -0.53
NLRP3-204ENST00000366497 SYNJ2O15056 1496 aa11.7□□□□□ -0.54
NLRP3-204ENST00000366497 NAIPQ13075 1403 aa11.7□□□□□ -0.54
NLRP3-204ENST00000366497 HECW1Q76N89 1606 aa11.7□□□□□ -0.54
NLRP3-204ENST00000366497 WASHC2CQ9Y4E1 1318 aa11.7□□□□□ -0.54
NLRP3-204ENST00000366497 STK26Q9P289 416 aa11.69□□□□□ -0.54
NLRP3-204ENST00000366497 SRPK2P78362 688 aaKnown RBP11.68□□□□□ -0.54
NLRP3-204ENST00000366497 AFAP1Q8N556 730 aa11.68□□□□□ -0.54
NLRP3-204ENST00000366497 CYB5RLQ6IPT4 315 aa11.67□□□□□ -0.54
NLRP3-204ENST00000366497 SUPT6HQ7KZ85 1726 aaKnown RBP11.67□□□□□ -0.54
NLRP3-204ENST00000366497 WASHC2AQ641Q2 1341 aa11.67□□□□□ -0.54
NLRP3-204ENST00000366497 MORC1Q86VD1 984 aa11.67□□□□□ -0.54
NLRP3-204ENST00000366497 NUTM2DQ5VT03 806 aaPredicted RBP11.66□□□□□ -0.54
NLRP3-204ENST00000366497 NLRP13Q86W25 1043 aa11.66□□□□□ -0.54
NLRP3-204ENST00000366497 GRIN2AQ12879 1464 aa11.66□□□□□ -0.54
NLRP3-204ENST00000366497 KIF7Q2M1P5 1343 aa11.66□□□□□ -0.54
NLRP3-204ENST00000366497 DAPK1P53355 1430 aa11.66□□□□□ -0.54
NLRP3-204ENST00000366497 AEBP2Q6ZN18 517 aaPredicted RBP11.65□□□□□ -0.54
NLRP3-204ENST00000366497 PLB1Q6P1J6 1458 aa11.65□□□□□ -0.54
NLRP3-204ENST00000366497 CCDC7Q96M83 1385 aa11.65□□□□□ -0.54
NLRP3-204ENST00000366497 NBPF8Q3BBV2 869 aa11.65□□□□□ -0.54
NLRP3-204ENST00000366497 NUDCQ9Y266 331 aa11.65□□□□□ -0.54
NLRP3-204ENST00000366497 U2SURPO15042 1029 aaKnown RBP11.65□□□□□ -0.54
NLRP3-204ENST00000366497 PANK3Q9H999 370 aa11.64□□□□□ -0.55
NLRP3-204ENST00000366497 C9orf84Q5VXU9 1444 aa11.63□□□□□ -0.55
NLRP3-204ENST00000366497 PLEKHG5O94827 1062 aa11.63□□□□□ -0.55
NLRP3-204ENST00000366497 TRAK1Q9UPV9 953 aa11.63□□□□□ -0.55
NLRP3-204ENST00000366497 WDR97A6NE52 1622 aa11.63□□□□□ -0.55
NLRP3-204ENST00000366497 MAPK8IP3Q9UPT6 1336 aa11.62□□□□□ -0.55
NLRP3-204ENST00000366497 C14orf37Q86TY3 774 aa11.62□□□□□ -0.55
NLRP3-204ENST00000366497 UPF2Q9HAU5 1272 aaKnown RBP11.62□□□□□ -0.55
NLRP3-204ENST00000366497 ARHGAP5Q13017 1502 aa11.62□□□□□ -0.55
NLRP3-204ENST00000366497 EIF3AQ14152 1382 aaKnown RBP11.62□□□□□ -0.55
NLRP3-204ENST00000366497 MAGI1Q96QZ7 1491 aaPredicted RBP11.62□□□□□ -0.55
NLRP3-204ENST00000366497 FRAT1Q92837 279 aaPredicted RBP11.61□□□□□ -0.55
NLRP3-204ENST00000366497 MYBBP1AQ9BQG0 1328 aaKnown RBP11.61□□□□□ -0.55
NLRP3-204ENST00000366497 KIAA1107Q9UPP5 1409 aa11.6□□□□□ -0.55
NLRP3-204ENST00000366497 RCAN3Q9UKA8 241 aa11.6□□□□□ -0.55
NLRP3-204ENST00000366497 ROCK1Q13464 1354 aa11.59□□□□□ -0.55
NLRP3-204ENST00000366497 HDGFP51858 240 aaKnown RBP11.59□□□□□ -0.55
NLRP3-204ENST00000366497 PTPN23Q9H3S7 1636 aa11.59□□□□□ -0.55
NLRP3-204ENST00000366497 LAS1LQ9Y4W2 734 aaKnown RBP11.59□□□□□ -0.55
NLRP3-204ENST00000366497 ABCC5O15440 1437 aa11.58□□□□□ -0.55
NLRP3-204ENST00000366497 ERICH6BQ5W0A0 696 aa11.58□□□□□ -0.56
NLRP3-204ENST00000366497 ZBTB7CA1YPR0 619 aa11.58□□□□□ -0.56
NLRP3-204ENST00000366497 NBR1Q14596 966 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms