RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 HECW1Q76N89 1606 aa18.49■□□□□ 0.55
CSNK1E-202ENST00000366216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.48■□□□□ 0.55
CSNK1E-202ENST00000366216 HNRNPUL2Q1KMD3 747 aaKnown RBP18.48■□□□□ 0.55
CSNK1E-202ENST00000366216 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.48■□□□□ 0.55
CSNK1E-202ENST00000366216 MAGI2Q86UL8 1455 aa18.47■□□□□ 0.55
CSNK1E-202ENST00000366216 ARHGEF12Q9NZN5 1544 aa18.47■□□□□ 0.55
CSNK1E-202ENST00000366216 MLECQ14165 292 aa18.44■□□□□ 0.54
CSNK1E-202ENST00000366216 DMRT2Q9Y5R5 561 aa18.42■□□□□ 0.54
CSNK1E-202ENST00000366216 MYO5CQ9NQX4 1742 aa18.39■□□□□ 0.53
CSNK1E-202ENST00000366216 C3P01024 1663 aa18.38■□□□□ 0.53
CSNK1E-202ENST00000366216 PLEKHD1A6NEE1 506 aa18.38■□□□□ 0.53
CSNK1E-202ENST00000366216 ATP10AO60312 1499 aa18.37■□□□□ 0.53
CSNK1E-202ENST00000366216 C9orf84Q5VXU9 1444 aa18.36■□□□□ 0.53
CSNK1E-202ENST00000366216 UHRF1BP1Q6BDS2 1440 aa18.36■□□□□ 0.53
CSNK1E-202ENST00000366216 CEBPAP49715 358 aaPredicted RBP18.35■□□□□ 0.53
CSNK1E-202ENST00000366216 LTBP4Q8N2S1 1624 aa18.34■□□□□ 0.53
CSNK1E-202ENST00000366216 RANGAP1P46060 587 aaPredicted RBP18.34■□□□□ 0.53
CSNK1E-202ENST00000366216 IQSEC2Q5JU85 1478 aa18.33■□□□□ 0.53
CSNK1E-202ENST00000366216 PTPRTO14522 1441 aa18.33■□□□□ 0.53
CSNK1E-202ENST00000366216 SCAPERQ9BY12 1400 aa18.32■□□□□ 0.52
CSNK1E-202ENST00000366216 CSRNP3Q8WYN3 585 aa18.31■□□□□ 0.52
CSNK1E-202ENST00000366216 CDK13Q14004 1512 aaKnown RBP18.3■□□□□ 0.52
CSNK1E-202ENST00000366216 PLCH2O75038 1416 aa18.28■□□□□ 0.52
CSNK1E-202ENST00000366216 SUPT6HQ7KZ85 1726 aaKnown RBP18.26■□□□□ 0.51
CSNK1E-202ENST00000366216 KDM5CP41229 1560 aa18.26■□□□□ 0.51
CSNK1E-202ENST00000366216 REREQ9P2R6 1566 aa18.25■□□□□ 0.51
CSNK1E-202ENST00000366216 DIP2CQ9Y2E4 1556 aa18.25■□□□□ 0.51
CSNK1E-202ENST00000366216 ZNF518AQ6AHZ1 1483 aa18.24■□□□□ 0.51
CSNK1E-202ENST00000366216 ABCA6Q8N139 1617 aa18.23■□□□□ 0.51
CSNK1E-202ENST00000366216 KIF14Q15058 1648 aa18.21■□□□□ 0.51
CSNK1E-202ENST00000366216 CDC42BPBQ9Y5S2 1711 aa18.2■□□□□ 0.5
CSNK1E-202ENST00000366216 NCOA1Q15788 1441 aa18.2■□□□□ 0.5
CSNK1E-202ENST00000366216 MROH2AA6NES4 1674 aa18.18■□□□□ 0.5
CSNK1E-202ENST00000366216 AFAP1Q8N556 730 aa18.18■□□□□ 0.5
CSNK1E-202ENST00000366216 CAMSAP1Q5T5Y3 1602 aa18.18■□□□□ 0.5
CSNK1E-202ENST00000366216 EFCAB2Q5VUJ9 269 aa18.17■□□□□ 0.5
CSNK1E-202ENST00000366216 EEA1Q15075 1411 aa18.16■□□□□ 0.5
CSNK1E-202ENST00000366216 TRAPPC8Q9Y2L5 1435 aa18.16■□□□□ 0.5
CSNK1E-202ENST00000366216 AGLP35573 1532 aa18.16■□□□□ 0.5
CSNK1E-202ENST00000366216 ARHGAP5Q13017 1502 aa18.16■□□□□ 0.5
CSNK1E-202ENST00000366216 ITSN2Q9NZM3 1697 aa18.15■□□□□ 0.5
CSNK1E-202ENST00000366216 ZNF142P52746 1687 aaPredicted RBP18.14■□□□□ 0.49
CSNK1E-202ENST00000366216 LRRIQ1Q96JM4 1722 aa18.14■□□□□ 0.49
CSNK1E-202ENST00000366216 KIDINS220Q9ULH0 1771 aa18.13■□□□□ 0.49
CSNK1E-202ENST00000366216 ESF1Q9H501 851 aaKnown RBP18.11■□□□□ 0.49
CSNK1E-202ENST00000366216 MYT1LQ9UL68 1186 aa18.11■□□□□ 0.49
CSNK1E-202ENST00000366216 MLH3Q9UHC1 1453 aa18.11■□□□□ 0.49
CSNK1E-202ENST00000366216 MED1Q15648 1581 aaPredicted RBP18.11■□□□□ 0.49
CSNK1E-202ENST00000366216 PREX2Q70Z35 1606 aa18.09■□□□□ 0.49
CSNK1E-202ENST00000366216 MYO3AQ8NEV4 1616 aa18.09■□□□□ 0.49
CSNK1E-202ENST00000366216 CNTLNQ9NXG0 1405 aa18.09■□□□□ 0.49
CSNK1E-202ENST00000366216 UBAP1LF5GYI3 381 aa18.09■□□□□ 0.49
CSNK1E-202ENST00000366216 LOC105371045A0A1W2PR82 267 aa18.08■□□□□ 0.48
CSNK1E-202ENST00000366216 ZNF335Q9H4Z2 1342 aaPredicted RBP18.07■□□□□ 0.48
CSNK1E-202ENST00000366216 CLTCQ00610 1675 aaKnown RBP18.07■□□□□ 0.48
CSNK1E-202ENST00000366216 ABCC1P33527 1531 aa18.07■□□□□ 0.48
CSNK1E-202ENST00000366216 NPATQ14207 1427 aa18.06■□□□□ 0.48
CSNK1E-202ENST00000366216 CDC42BPAQ5VT25 1732 aa18.06■□□□□ 0.48
CSNK1E-202ENST00000366216 POLR1AO95602 1720 aaPredicted RBP18.04■□□□□ 0.48
CSNK1E-202ENST00000366216 ARHGAP35Q9NRY4 1499 aa18.04■□□□□ 0.48
CSNK1E-202ENST00000366216 TROQ12816 1431 aaPredicted RBP18.04■□□□□ 0.48
CSNK1E-202ENST00000366216 CDK11AQ9UQ88 783 aaPredicted RBP18.03■□□□□ 0.48
CSNK1E-202ENST00000366216 NCKAP5LQ9HCH0 1330 aa18.02■□□□□ 0.48
CSNK1E-202ENST00000366216 PLA2R1Q13018 1463 aa18.02■□□□□ 0.48
CSNK1E-202ENST00000366216 ATP1B4Q9UN42 357 aaPredicted RBP18.02■□□□□ 0.48
CSNK1E-202ENST00000366216 CEP170BQ9Y4F5 1589 aaPredicted RBP18.02■□□□□ 0.48
CSNK1E-202ENST00000366216 CLIP1P30622 1438 aa18.01■□□□□ 0.47
CSNK1E-202ENST00000366216 FMN1Q68DA7 1419 aa18.01■□□□□ 0.47
CSNK1E-202ENST00000366216 EHMT2Q96KQ7 1210 aa17.99■□□□□ 0.47
CSNK1E-202ENST00000366216 TCOF1Q13428 1488 aaKnown RBP17.99■□□□□ 0.47
CSNK1E-202ENST00000366216 ZMYM3Q14202 1370 aa17.97■□□□□ 0.47
CSNK1E-202ENST00000366216 PKD2Q13563 968 aa17.97■□□□□ 0.47
CSNK1E-202ENST00000366216 SAMD9LQ8IVG5 1584 aa17.96■□□□□ 0.47
CSNK1E-202ENST00000366216 HSPA1LP34931 641 aa17.95■□□□□ 0.46
CSNK1E-202ENST00000366216 SCAF1Q9H7N4 1312 aaKnown RBP17.93■□□□□ 0.46
CSNK1E-202ENST00000366216 DNMT1P26358 1616 aaKnown RBP17.92■□□□□ 0.46
CSNK1E-202ENST00000366216 PLXNC1O60486 1568 aa17.91■□□□□ 0.46
CSNK1E-202ENST00000366216 CPS1P31327 1500 aa17.91■□□□□ 0.46
CSNK1E-202ENST00000366216 PTPRKQ15262 1439 aa17.9■□□□□ 0.46
CSNK1E-202ENST00000366216 PIP4K2BP78356 416 aa17.9■□□□□ 0.46
CSNK1E-202ENST00000366216 PPP6R1Q9UPN7 881 aa17.9■□□□□ 0.46
CSNK1E-202ENST00000366216 INO80Q9ULG1 1556 aaPredicted RBP17.89■□□□□ 0.45
CSNK1E-202ENST00000366216 ADGBQ8N7X0 1667 aa17.89■□□□□ 0.45
CSNK1E-202ENST00000366216 ATP7AQ04656 1500 aa17.88■□□□□ 0.45
CSNK1E-202ENST00000366216 NEURL4Q96JN8 1562 aa17.88■□□□□ 0.45
CSNK1E-202ENST00000366216 TOM1O60784 492 aa17.88■□□□□ 0.45
CSNK1E-202ENST00000366216 SYCP2Q9BX26 1530 aa17.88■□□□□ 0.45
CSNK1E-202ENST00000366216 UBTFP17480 764 aaKnown RBP17.87■□□□□ 0.45
CSNK1E-202ENST00000366216 A2ML1A8K2U0 1454 aa17.86■□□□□ 0.45
CSNK1E-202ENST00000366216 ALKQ9UM73 1620 aa17.85■□□□□ 0.45
CSNK1E-202ENST00000366216 SHANK2Q9UPX8 1470 aa17.84■□□□□ 0.45
CSNK1E-202ENST00000366216 CCDC18Q5T9S5 1454 aa17.83■□□□□ 0.45
CSNK1E-202ENST00000366216 A2MP01023 1474 aa17.82■□□□□ 0.44
CSNK1E-202ENST00000366216 HNRNPMP52272 730 aaKnown RBP eCLIP17.82■□□□□ 0.44
CSNK1E-202ENST00000366216 VWDEQ8N2E2 1590 aa17.82■□□□□ 0.44
CSNK1E-202ENST00000366216 STRCP1A6NGW2 1772 aa17.81■□□□□ 0.44
CSNK1E-202ENST00000366216 SPAG9O60271 1321 aaKnown RBP17.81■□□□□ 0.44
CSNK1E-202ENST00000366216 GPATCH8Q9UKJ3 1502 aaKnown RBP17.81■□□□□ 0.44
CSNK1E-202ENST00000366216 CASKIN1Q8WXD9 1431 aa17.8■□□□□ 0.44
CSNK1E-202ENST00000366216 FOXD1Q16676 465 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms