RNA–Protein interactions for RNA: ENST00000365040.1

RNU1-140P-201, Transcript of RNA, U1 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU1-140P, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-140P-201ENST00000365040 ATMINO43313 823 aaPredicted RBP6.11□□□□□ -1.43
RNU1-140P-201ENST00000365040 GABBR2O75899 941 aa6.11□□□□□ -1.43
RNU1-140P-201ENST00000365040 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.11□□□□□ -1.43
RNU1-140P-201ENST00000365040 KDM2AQ9Y2K7 1162 aa6.11□□□□□ -1.43
RNU1-140P-201ENST00000365040 WDR62O43379 1518 aa6.1□□□□□ -1.43
RNU1-140P-201ENST00000365040 ATN1P54259 1190 aaPredicted RBP6.09□□□□□ -1.43
RNU1-140P-201ENST00000365040 MS4A4AQ96JQ5 239 aa6.09□□□□□ -1.43
RNU1-140P-201ENST00000365040 DCBLD2Q96PD2 775 aa6.09□□□□□ -1.43
RNU1-140P-201ENST00000365040 MRC2Q9UBG0 1479 aa6.09□□□□□ -1.44
RNU1-140P-201ENST00000365040 SP7Q8TDD2 431 aaPredicted RBP6.08□□□□□ -1.44
RNU1-140P-201ENST00000365040 SLC39A7Q92504 469 aa6.08□□□□□ -1.44
RNU1-140P-201ENST00000365040 WDR70Q9NW82 654 aa6.08□□□□□ -1.44
RNU1-140P-201ENST00000365040 IRX5P78411 483 aaPredicted RBP6.07□□□□□ -1.44
RNU1-140P-201ENST00000365040 OCEL1Q9H607 264 aa6.07□□□□□ -1.44
RNU1-140P-201ENST00000365040 PRDM2Q13029 1718 aa6.06□□□□□ -1.44
RNU1-140P-201ENST00000365040 G3V3G9 751 aa6.06□□□□□ -1.44
RNU1-140P-201ENST00000365040 PLCG2P16885 1265 aa6.06□□□□□ -1.44
RNU1-140P-201ENST00000365040 CEP164Q9UPV0 1460 aa6.05□□□□□ -1.44
RNU1-140P-201ENST00000365040 PPP1R37O75864 691 aa6.05□□□□□ -1.44
RNU1-140P-201ENST00000365040 PDE4AP27815 886 aa6.05□□□□□ -1.44
RNU1-140P-201ENST00000365040 NBR1Q14596 966 aa6.05□□□□□ -1.44
RNU1-140P-201ENST00000365040 PDCD7Q8N8D1 485 aaKnown RBP6.05□□□□□ -1.44
RNU1-140P-201ENST00000365040 L3MBTL3Q96JM7 780 aaPredicted RBP6.05□□□□□ -1.44
RNU1-140P-201ENST00000365040 C7P10643 843 aa6.04□□□□□ -1.44
RNU1-140P-201ENST00000365040 MFSD10Q14728 455 aa6.03□□□□□ -1.44
RNU1-140P-201ENST00000365040 CRISPLD2Q9H0B8 497 aa6.03□□□□□ -1.44
RNU1-140P-201ENST00000365040 CADPSQ9ULU8 1353 aa6.03□□□□□ -1.44
RNU1-140P-201ENST00000365040 SEC24BO95487 1268 aa6.02□□□□□ -1.45
RNU1-140P-201ENST00000365040 CADPS2Q86UW7 1296 aa6.02□□□□□ -1.45
RNU1-140P-201ENST00000365040 MICALL2Q8IY33 904 aa6.02□□□□□ -1.45
RNU1-140P-201ENST00000365040 DDX27Q96GQ7 796 aaKnown RBP6.01□□□□□ -1.45
RNU1-140P-201ENST00000365040 TMEM121BQ9BXQ6 578 aaPredicted RBP6.01□□□□□ -1.45
RNU1-140P-201ENST00000365040 BOLA1Q9Y3E2 137 aa6.01□□□□□ -1.45
RNU1-140P-201ENST00000365040 METRNQ9UJH8 293 aa6□□□□□ -1.45
RNU1-140P-201ENST00000365040 MROH2BQ7Z745 1585 aa6□□□□□ -1.45
RNU1-140P-201ENST00000365040 NCKAP5LQ9HCH0 1330 aa5.99□□□□□ -1.45
RNU1-140P-201ENST00000365040 E2F4Q16254 413 aa5.99□□□□□ -1.45
RNU1-140P-201ENST00000365040 ARHGEF1Q92888 912 aaKnown RBP5.99□□□□□ -1.45
RNU1-140P-201ENST00000365040 GPHNQ9NQX3 736 aaPredicted RBP5.99□□□□□ -1.45
RNU1-140P-201ENST00000365040 FANCD2Q9BXW9 1451 aa5.98□□□□□ -1.45
RNU1-140P-201ENST00000365040 TMC2Q8TDI7 906 aa5.98□□□□□ -1.45
RNU1-140P-201ENST00000365040 ARIH1Q9Y4X5 557 aaPredicted RBP5.98□□□□□ -1.45
RNU1-140P-201ENST00000365040 RIMBP3CA6NJZ7 1639 aa5.97□□□□□ -1.45
RNU1-140P-201ENST00000365040 RIMBP3BA6NNM3 1639 aa5.97□□□□□ -1.45
RNU1-140P-201ENST00000365040 RIMBP3Q9UFD9 1639 aa5.97□□□□□ -1.45
RNU1-140P-201ENST00000365040 CAMK2BQ13554 666 aa5.97□□□□□ -1.45
RNU1-140P-201ENST00000365040 KCNV2Q8TDN2 545 aa5.97□□□□□ -1.45
RNU1-140P-201ENST00000365040 LARP6Q9BRS8 491 aaKnown RBP5.97□□□□□ -1.45
RNU1-140P-201ENST00000365040 WIZO95785 1651 aa5.96□□□□□ -1.46
RNU1-140P-201ENST00000365040 TULP1O00294 542 aaPredicted RBP5.96□□□□□ -1.46
RNU1-140P-201ENST00000365040 PPP1R15BQ5SWA1 713 aa5.96□□□□□ -1.46
RNU1-140P-201ENST00000365040 CFTRP13569 1480 aa5.96□□□□□ -1.46
RNU1-140P-201ENST00000365040 FOXK1P85037 733 aa5.95□□□□□ -1.46
RNU1-140P-201ENST00000365040 C3orf67Q6ZVT6 689 aa5.95□□□□□ -1.46
RNU1-140P-201ENST00000365040 PELP1Q8IZL8 1130 aaKnown RBP5.95□□□□□ -1.46
RNU1-140P-201ENST00000365040 DPY19L2Q6NUT2 758 aa5.94□□□□□ -1.46
RNU1-140P-201ENST00000365040 KIF3CO14782 793 aa5.93□□□□□ -1.46
RNU1-140P-201ENST00000365040 POTEIP0CG38 1075 aa5.93□□□□□ -1.46
RNU1-140P-201ENST00000365040 COLQQ9Y215 455 aaPredicted RBP5.93□□□□□ -1.46
RNU1-140P-201ENST00000365040 TOP2AP11388 1531 aaKnown RBP5.93□□□□□ -1.46
RNU1-140P-201ENST00000365040 IFT140Q96RY7 1462 aa5.92□□□□□ -1.46
RNU1-140P-201ENST00000365040 ARHGEF11O15085 1522 aa5.92□□□□□ -1.46
RNU1-140P-201ENST00000365040 ABCC8Q09428 1581 aa5.92□□□□□ -1.46
RNU1-140P-201ENST00000365040 URB2Q14146 1524 aaKnown RBP5.91□□□□□ -1.46
RNU1-140P-201ENST00000365040 EIF4G3O43432 1585 aaKnown RBP5.91□□□□□ -1.46
RNU1-140P-201ENST00000365040 WDR97A6NE52 1622 aa5.91□□□□□ -1.46
RNU1-140P-201ENST00000365040 POTEFA5A3E0 1075 aa5.9□□□□□ -1.46
RNU1-140P-201ENST00000365040 C2orf72A6NCS6 295 aa5.9□□□□□ -1.46
RNU1-140P-201ENST00000365040 SPDYE16A6NNV3 312 aaPredicted RBP5.9□□□□□ -1.46
RNU1-140P-201ENST00000365040 DSG2Q14126 1118 aa5.9□□□□□ -1.46
RNU1-140P-201ENST00000365040 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.9□□□□□ -1.46
RNU1-140P-201ENST00000365040 CHD1O14646 1710 aa5.9□□□□□ -1.47
RNU1-140P-201ENST00000365040 ZNF316A6NFI3 1004 aaPredicted RBP5.89□□□□□ -1.47
RNU1-140P-201ENST00000365040 SMYD5Q6GMV2 418 aa5.89□□□□□ -1.47
RNU1-140P-201ENST00000365040 RSF1Q96T23 1441 aaPredicted RBP5.89□□□□□ -1.47
RNU1-140P-201ENST00000365040 MAMSTRQ6ZN01 415 aa5.88□□□□□ -1.47
RNU1-140P-201ENST00000365040 PLPP6Q8IY26 295 aa5.88□□□□□ -1.47
RNU1-140P-201ENST00000365040 DNMBPQ6XZF7 1577 aa5.88□□□□□ -1.47
RNU1-140P-201ENST00000365040 PDIA6Q15084 440 aa5.87□□□□□ -1.47
RNU1-140P-201ENST00000365040 SLC34A2O95436 690 aa5.86□□□□□ -1.47
RNU1-140P-201ENST00000365040 SCUBE2Q9NQ36 999 aa5.86□□□□□ -1.47
RNU1-140P-201ENST00000365040 TOPBP1Q92547 1522 aa5.85□□□□□ -1.47
RNU1-140P-201ENST00000365040 TESPA1A2RU30 521 aaPredicted RBP5.85□□□□□ -1.47
RNU1-140P-201ENST00000365040 TMEM92Q6UXU6 159 aa5.85□□□□□ -1.47
RNU1-140P-201ENST00000365040 TBC1D12O60347 775 aa5.84□□□□□ -1.47
RNU1-140P-201ENST00000365040 TARBP1Q13395 1621 aaKnown RBP5.84□□□□□ -1.47
RNU1-140P-201ENST00000365040 SYNJ1O43426 1573 aa5.84□□□□□ -1.48
RNU1-140P-201ENST00000365040 OXER1Q8TDS5 423 aa5.83□□□□□ -1.48
RNU1-140P-201ENST00000365040 EMILIN3Q9NT22 766 aa5.83□□□□□ -1.48
RNU1-140P-201ENST00000365040 ZNF608Q9ULD9 1512 aaPredicted RBP5.83□□□□□ -1.48
RNU1-140P-201ENST00000365040 ARAP1Q96P48 1450 aa5.83□□□□□ -1.48
RNU1-140P-201ENST00000365040 DPYSL4O14531 572 aa5.82□□□□□ -1.48
RNU1-140P-201ENST00000365040 MAP3K9P80192 1104 aa5.82□□□□□ -1.48
RNU1-140P-201ENST00000365040 LMOD2Q6P5Q4 547 aa5.82□□□□□ -1.48
RNU1-140P-201ENST00000365040 PTCD2Q8WV60 388 aaKnown RBP5.82□□□□□ -1.48
RNU1-140P-201ENST00000365040 CLASP1Q7Z460 1538 aa5.81□□□□□ -1.48
RNU1-140P-201ENST00000365040 RIMBP2O15034 1052 aa5.81□□□□□ -1.48
RNU1-140P-201ENST00000365040 SEMA3EO15041 775 aa5.81□□□□□ -1.48
RNU1-140P-201ENST00000365040 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.81□□□□□ -1.48
RNU1-140P-201ENST00000365040 MAGI1Q96QZ7 1491 aaPredicted RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms