RNA–Protein interactions for RNA: ENST00000362058.2

CROCCP2-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 2

Gene CROCCP2, Length 2,029 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-201ENST00000362058 ADCY10Q96PN6 1610 aa34.33■■■■□ 3.09
CROCCP2-201ENST00000362058 HIRIP3Q9BW71 556 aaPredicted RBP34.32■■■■□ 3.08
CROCCP2-201ENST00000362058 MPHOSPH9Q99550 1183 aa34.31■■■■□ 3.08
CROCCP2-201ENST00000362058 CCER2I3L3R5 266 aa34.27■■■■□ 3.08
CROCCP2-201ENST00000362058 ANP32CO43423 234 aa34.26■■■■□ 3.08
CROCCP2-201ENST00000362058 KCNH8Q96L42 1107 aa34.26■■■■□ 3.08
CROCCP2-201ENST00000362058 PLB1Q6P1J6 1458 aa34.26■■■■□ 3.08
CROCCP2-201ENST00000362058 PRG4Q92954 1404 aaPredicted RBP34.25■■■■□ 3.07
CROCCP2-201ENST00000362058 ADGBQ8N7X0 1667 aa34.23■■■■□ 3.07
CROCCP2-201ENST00000362058 FBLN2P98095 1184 aa34.23■■■■□ 3.07
CROCCP2-201ENST00000362058 CAMSAP2Q08AD1 1489 aa34.21■■■■□ 3.07
CROCCP2-201ENST00000362058 JPH4Q96JJ6 628 aa34.21■■■■□ 3.07
CROCCP2-201ENST00000362058 ZNF644Q9H582 1327 aaPredicted RBP34.2■■■■□ 3.06
CROCCP2-201ENST00000362058 KIF14Q15058 1648 aa34.17■■■■□ 3.06
CROCCP2-201ENST00000362058 GPATCH8Q9UKJ3 1502 aaKnown RBP34.17■■■■□ 3.06
CROCCP2-201ENST00000362058 CROCC2H7BZ55 1655 aa34.16■■■■□ 3.06
CROCCP2-201ENST00000362058 CFDP1Q9UEE9 299 aaPredicted RBP34.16■■■■□ 3.06
CROCCP2-201ENST00000362058 ABCA8O94911 1581 aa34.13■■■■□ 3.05
CROCCP2-201ENST00000362058 ANKRD30BQ9BXX2 1392 aa34.13■■■■□ 3.05
CROCCP2-201ENST00000362058 RPRD2Q5VT52 1461 aaKnown RBP34.11■■■■□ 3.05
CROCCP2-201ENST00000362058 SUPT16HQ9Y5B9 1047 aaKnown RBP34.11■■■■□ 3.05
CROCCP2-201ENST00000362058 ADGRL2O95490 1459 aa34.09■■■■□ 3.05
CROCCP2-201ENST00000362058 NCOA1Q15788 1441 aa34.06■■■■□ 3.04
CROCCP2-201ENST00000362058 L3MBTL2Q969R5 705 aa34.06■■■■□ 3.04
CROCCP2-201ENST00000362058 HSPA5P11021 654 aaKnown RBP34.04■■■■□ 3.04
CROCCP2-201ENST00000362058 EIF4G2P78344 907 aaKnown RBP eCLIP34.04■■■■□ 3.04
CROCCP2-201ENST00000362058 CDC42BPAQ5VT25 1732 aa34.04■■■■□ 3.04
CROCCP2-201ENST00000362058 SLC4A1APQ9BWU0 796 aaKnown RBP34.04■■■■□ 3.04
CROCCP2-201ENST00000362058 FOXD1Q16676 465 aa34.03■■■■□ 3.04
CROCCP2-201ENST00000362058 PLEKHD1A6NEE1 506 aa34.01■■■■□ 3.03
CROCCP2-201ENST00000362058 TEX14Q8IWB6 1497 aa34■■■■□ 3.03
CROCCP2-201ENST00000362058 PZPP20742 1482 aa33.98■■■■□ 3.03
CROCCP2-201ENST00000362058 ANKRD30AQ9BXX3 1397 aa33.98■■■■□ 3.03
CROCCP2-201ENST00000362058 ATP10BO94823 1461 aa33.97■■■■□ 3.03
CROCCP2-201ENST00000362058 ABCC10Q5T3U5 1492 aa33.96■■■■□ 3.03
CROCCP2-201ENST00000362058 ZNF777Q9ULD5 760 aaPredicted RBP33.96■■■■□ 3.03
CROCCP2-201ENST00000362058 WASHC2AQ641Q2 1341 aa33.93■■■■□ 3.02
CROCCP2-201ENST00000362058 SHANK2Q9UPX8 1470 aa33.93■■■■□ 3.02
CROCCP2-201ENST00000362058 KIAA1107Q9UPP5 1409 aa33.87■■■■□ 3.01
CROCCP2-201ENST00000362058 POLR1AO95602 1720 aaPredicted RBP33.87■■■■□ 3.01
CROCCP2-201ENST00000362058 CNTLNQ9NXG0 1405 aa33.84■■■■□ 3.01
CROCCP2-201ENST00000362058 ANKRD50Q9ULJ7 1429 aa33.84■■■■□ 3.01
CROCCP2-201ENST00000362058 PTPRGP23470 1445 aa33.82■■■■□ 3.01
CROCCP2-201ENST00000362058 NBPF8Q3BBV2 869 aa33.82■■■■□ 3
CROCCP2-201ENST00000362058 C9orf84Q5VXU9 1444 aa33.81■■■■□ 3
CROCCP2-201ENST00000362058 ARHGEF5Q12774 1597 aa33.8■■■■□ 3
CROCCP2-201ENST00000362058 CHD1O14646 1710 aa33.8■■■■□ 3
CROCCP2-201ENST00000362058 CCDC7Q96M83 1385 aa33.78■■■■□ 3
CROCCP2-201ENST00000362058 MBD5Q9P267 1494 aa33.75■■■□□ 2.99
CROCCP2-201ENST00000362058 SPATA31E1Q6ZUB1 1445 aa33.74■■■□□ 2.99
CROCCP2-201ENST00000362058 KDM5DQ9BY66 1539 aa33.74■■■□□ 2.99
CROCCP2-201ENST00000362058 TSPY4P0CV99 314 aa33.73■■■□□ 2.99
CROCCP2-201ENST00000362058 TSPY10P0CW01 314 aa33.73■■■□□ 2.99
CROCCP2-201ENST00000362058 PKD2Q13563 968 aa33.72■■■□□ 2.99
CROCCP2-201ENST00000362058 PREX2Q70Z35 1606 aa33.72■■■□□ 2.99
CROCCP2-201ENST00000362058 SHROOM2Q13796 1616 aa33.7■■■□□ 2.99
CROCCP2-201ENST00000362058 CDC42BPBQ9Y5S2 1711 aa33.69■■■□□ 2.98
CROCCP2-201ENST00000362058 NEFLP07196 543 aa33.67■■■□□ 2.98
CROCCP2-201ENST00000362058 C11orf95C9JLR9 678 aaPredicted RBP33.65■■■□□ 2.98
CROCCP2-201ENST00000362058 NUP155O75694 1391 aa33.65■■■□□ 2.98
CROCCP2-201ENST00000362058 SAMD9LQ8IVG5 1584 aa33.64■■■□□ 2.97
CROCCP2-201ENST00000362058 FKBP8Q14318 412 aa33.63■■■□□ 2.97
CROCCP2-201ENST00000362058 CCDC141Q6ZP82 1450 aa33.63■■■□□ 2.97
CROCCP2-201ENST00000362058 KIF15Q9NS87 1388 aa33.62■■■□□ 2.97
CROCCP2-201ENST00000362058 RSPH4AQ5TD94 716 aa33.62■■■□□ 2.97
CROCCP2-201ENST00000362058 ARHGEF12Q9NZN5 1544 aa33.59■■■□□ 2.97
CROCCP2-201ENST00000362058 HNRNPMP52272 730 aaKnown RBP eCLIP33.58■■■□□ 2.97
CROCCP2-201ENST00000362058 KIF7Q2M1P5 1343 aa33.58■■■□□ 2.97
CROCCP2-201ENST00000362058 PRKRIP1Q9H875 184 aaPredicted RBP33.56■■■□□ 2.96
CROCCP2-201ENST00000362058 UHRF1BP1Q6BDS2 1440 aa33.56■■■□□ 2.96
CROCCP2-201ENST00000362058 HNRNPUQ00839 825 aaKnown RBP eCLIP33.55■■■□□ 2.96
CROCCP2-201ENST00000362058 KDM5CP41229 1560 aa33.52■■■□□ 2.96
CROCCP2-201ENST00000362058 USP47Q96K76 1375 aa33.52■■■□□ 2.96
CROCCP2-201ENST00000362058 MAST1Q9Y2H9 1570 aa33.52■■■□□ 2.96
CROCCP2-201ENST00000362058 ABCC2Q92887 1545 aa33.51■■■□□ 2.95
CROCCP2-201ENST00000362058 RALGAPBQ86X10 1494 aa33.5■■■□□ 2.95
CROCCP2-201ENST00000362058 TTC37Q6PGP7 1564 aa33.49■■■□□ 2.95
CROCCP2-201ENST00000362058 MYO5CQ9NQX4 1742 aa33.49■■■□□ 2.95
CROCCP2-201ENST00000362058 ARID4BQ4LE39 1312 aaPredicted RBP33.47■■■□□ 2.95
CROCCP2-201ENST00000362058 ARHGAP5Q13017 1502 aa33.47■■■□□ 2.95
CROCCP2-201ENST00000362058 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.46■■■□□ 2.953e-9■■□□□ 12.3
CROCCP2-201ENST00000362058 BCORL1Q5H9F3 1711 aa33.46■■■□□ 2.95
CROCCP2-201ENST00000362058 ZNF326Q5BKZ1 582 aaKnown RBP33.45■■■□□ 2.95
CROCCP2-201ENST00000362058 BCANQ96GW7 911 aa33.45■■■□□ 2.95
CROCCP2-201ENST00000362058 SYCP2Q9BX26 1530 aa33.45■■■□□ 2.95
CROCCP2-201ENST00000362058 PLEKHH2Q8IVE3 1493 aa33.44■■■□□ 2.94
CROCCP2-201ENST00000362058 FAM135AQ9P2D6 1515 aa33.44■■■□□ 2.94
CROCCP2-201ENST00000362058 UNC13BO14795 1591 aa33.41■■■□□ 2.94
CROCCP2-201ENST00000362058 PLXNC1O60486 1568 aa33.39■■■□□ 2.94
CROCCP2-201ENST00000362058 MRS2Q9HD23 443 aa33.38■■■□□ 2.93
CROCCP2-201ENST00000362058 ERCC6L2Q5T890 1561 aa33.38■■■□□ 2.93
CROCCP2-201ENST00000362058 CCDC184Q52MB2 194 aa33.37■■■□□ 2.93
CROCCP2-201ENST00000362058 TSHZ2Q9NRE2 1034 aa33.37■■■□□ 2.93
CROCCP2-201ENST00000362058 ROCK2O75116 1388 aaKnown RBP33.34■■■□□ 2.93
CROCCP2-201ENST00000362058 CARD11Q9BXL7 1154 aa33.31■■■□□ 2.92
CROCCP2-201ENST00000362058 DHX29Q7Z478 1369 aaKnown RBP33.31■■■□□ 2.92
CROCCP2-201ENST00000362058 ZCCHC11Q5TAX3 1644 aaKnown RBP33.29■■■□□ 2.92
CROCCP2-201ENST00000362058 CLASP1Q7Z460 1538 aa33.29■■■□□ 2.92
CROCCP2-201ENST00000362058 IQGAP3Q86VI3 1631 aa33.28■■■□□ 2.92
CROCCP2-201ENST00000362058 FAM9BQ8IZU0 186 aa33.28■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms