RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 NEFLP07196 543 aa22.72■■□□□ 1.23
IFT140-201ENST00000361339 ZNF777Q9ULD5 760 aaPredicted RBP22.71■■□□□ 1.23
IFT140-201ENST00000361339 MIA2Q96PC5 1412 aa22.69■■□□□ 1.22
IFT140-201ENST00000361339 CEP170Q5SW79 1584 aa22.68■■□□□ 1.22
IFT140-201ENST00000361339 ABCC5O15440 1437 aa22.68■■□□□ 1.22
IFT140-201ENST00000361339 DAPK1P53355 1430 aa22.67■■□□□ 1.22
IFT140-201ENST00000361339 GCC2Q8IWJ2 1684 aa22.67■■□□□ 1.22
IFT140-201ENST00000361339 L3MBTL2Q969R5 705 aa22.67■■□□□ 1.22
IFT140-201ENST00000361339 RAPGEF6Q8TEU7 1601 aa22.66■■□□□ 1.22
IFT140-201ENST00000361339 HSPA5P11021 654 aaKnown RBP22.65■■□□□ 1.22
IFT140-201ENST00000361339 ANP32CO43423 234 aa22.65■■□□□ 1.22
IFT140-201ENST00000361339 MSH5O43196 834 aa22.63■■□□□ 1.21
IFT140-201ENST00000361339 JPH4Q96JJ6 628 aa22.63■■□□□ 1.21
IFT140-201ENST00000361339 IRX6P78412 446 aaPredicted RBP22.6■■□□□ 1.21
IFT140-201ENST00000361339 CFDP1Q9UEE9 299 aaPredicted RBP22.6■■□□□ 1.21
IFT140-201ENST00000361339 ERICH6Q7L0X2 663 aa22.6■■□□□ 1.21
IFT140-201ENST00000361339 WASHC2AQ641Q2 1341 aa22.6■■□□□ 1.21
IFT140-201ENST00000361339 SYNJ2O15056 1496 aa22.58■■□□□ 1.21
IFT140-201ENST00000361339 NBPF8Q3BBV2 869 aa22.58■■□□□ 1.21
IFT140-201ENST00000361339 SLC4A1APQ9BWU0 796 aaKnown RBP22.58■■□□□ 1.21
IFT140-201ENST00000361339 KIF14Q15058 1648 aa22.58■■□□□ 1.21
IFT140-201ENST00000361339 AKNAQ7Z591 1439 aa22.58■■□□□ 1.2
IFT140-201ENST00000361339 C11orf95C9JLR9 678 aaPredicted RBP22.58■■□□□ 1.2
IFT140-201ENST00000361339 CDK11AQ9UQ88 783 aaPredicted RBP22.58■■□□□ 1.2
IFT140-201ENST00000361339 MAGI1Q96QZ7 1491 aaPredicted RBP22.56■■□□□ 1.2
IFT140-201ENST00000361339 TROQ12816 1431 aaPredicted RBP22.55■■□□□ 1.2
IFT140-201ENST00000361339 DNMT1P26358 1616 aaKnown RBP22.54■■□□□ 1.2
IFT140-201ENST00000361339 ANKRD30BQ9BXX2 1392 aa22.53■■□□□ 1.2
IFT140-201ENST00000361339 CAMSAP2Q08AD1 1489 aa22.53■■□□□ 1.2
IFT140-201ENST00000361339 GPATCH8Q9UKJ3 1502 aaKnown RBP22.52■■□□□ 1.2
IFT140-201ENST00000361339 CCER2I3L3R5 266 aa22.5■■□□□ 1.19
IFT140-201ENST00000361339 ROCK1Q13464 1354 aa22.5■■□□□ 1.19
IFT140-201ENST00000361339 EIF4G2P78344 907 aaKnown RBP eCLIP22.49■■□□□ 1.19
IFT140-201ENST00000361339 CCDC184Q52MB2 194 aa22.48■■□□□ 1.19
IFT140-201ENST00000361339 NUP160Q12769 1436 aa22.48■■□□□ 1.19
IFT140-201ENST00000361339 ZNF326Q5BKZ1 582 aaKnown RBP22.45■■□□□ 1.18
IFT140-201ENST00000361339 NCOA1Q15788 1441 aa22.45■■□□□ 1.18
IFT140-201ENST00000361339 CARMIL2Q6F5E8 1435 aa22.45■■□□□ 1.18
IFT140-201ENST00000361339 CNGB1Q14028 1251 aaPredicted RBP22.44■■□□□ 1.18
IFT140-201ENST00000361339 PZPP20742 1482 aa22.44■■□□□ 1.18
IFT140-201ENST00000361339 RPRD2Q5VT52 1461 aaKnown RBP22.43■■□□□ 1.18
IFT140-201ENST00000361339 TEX14Q8IWB6 1497 aa22.42■■□□□ 1.18
IFT140-201ENST00000361339 PLEKHD1A6NEE1 506 aa22.41■■□□□ 1.18
IFT140-201ENST00000361339 ATP10BO94823 1461 aa22.41■■□□□ 1.18
IFT140-201ENST00000361339 PKD2Q13563 968 aa22.41■■□□□ 1.18
IFT140-201ENST00000361339 HNRNPMP52272 730 aaKnown RBP eCLIP22.39■■□□□ 1.18
IFT140-201ENST00000361339 HNRNPUQ00839 825 aaKnown RBP eCLIP22.38■■□□□ 1.17
IFT140-201ENST00000361339 CCDC7Q96M83 1385 aa22.34■■□□□ 1.17
IFT140-201ENST00000361339 POLR3GLQ9BT43 218 aa22.34■■□□□ 1.17
IFT140-201ENST00000361339 ABCA8O94911 1581 aa22.34■■□□□ 1.17
IFT140-201ENST00000361339 ITSN2Q9NZM3 1697 aa22.32■■□□□ 1.16
IFT140-201ENST00000361339 KIF7Q2M1P5 1343 aa22.32■■□□□ 1.16
IFT140-201ENST00000361339 ANKRD50Q9ULJ7 1429 aa22.31■■□□□ 1.16
IFT140-201ENST00000361339 ABCC10Q5T3U5 1492 aa22.31■■□□□ 1.16
IFT140-201ENST00000361339 ADCY10Q96PN6 1610 aa22.31■■□□□ 1.16
IFT140-201ENST00000361339 ANKRD30AQ9BXX3 1397 aa22.31■■□□□ 1.16
IFT140-201ENST00000361339 CNTLNQ9NXG0 1405 aa22.31■■□□□ 1.16
IFT140-201ENST00000361339 CDC42BPAQ5VT25 1732 aa22.3■■□□□ 1.16
IFT140-201ENST00000361339 PRKCSHP14314 528 aaPredicted RBP22.29■■□□□ 1.16
IFT140-201ENST00000361339 NUP155O75694 1391 aa22.29■■□□□ 1.16
IFT140-201ENST00000361339 PTPRGP23470 1445 aa22.28■■□□□ 1.16
IFT140-201ENST00000361339 NBR1Q14596 966 aa22.28■■□□□ 1.16
IFT140-201ENST00000361339 C9orf84Q5VXU9 1444 aa22.28■■□□□ 1.16
IFT140-201ENST00000361339 KIAA1107Q9UPP5 1409 aa22.28■■□□□ 1.16
IFT140-201ENST00000361339 FAM9BQ8IZU0 186 aa22.27■■□□□ 1.16
IFT140-201ENST00000361339 SENP3-EIF4A1A0A087X0R7 540 aa22.27■■□□□ 1.16
IFT140-201ENST00000361339 SPATA31E1Q6ZUB1 1445 aa22.27■■□□□ 1.16
IFT140-201ENST00000361339 ADGRL2O95490 1459 aa22.26■■□□□ 1.15
IFT140-201ENST00000361339 CROCC2H7BZ55 1655 aa22.26■■□□□ 1.15
IFT140-201ENST00000361339 PRKRIP1Q9H875 184 aaPredicted RBP22.26■■□□□ 1.15
IFT140-201ENST00000361339 ADGBQ8N7X0 1667 aa22.26■■□□□ 1.15
IFT140-201ENST00000361339 DEKP35659 375 aaKnown RBP22.26■■□□□ 1.15
IFT140-201ENST00000361339 KDM2AQ9Y2K7 1162 aa22.26■■□□□ 1.15
IFT140-201ENST00000361339 TSPY4P0CV99 314 aa22.23■■□□□ 1.15
IFT140-201ENST00000361339 TSPY10P0CW01 314 aa22.23■■□□□ 1.15
IFT140-201ENST00000361339 ERCC6L2Q5T890 1561 aa22.2■■□□□ 1.15
IFT140-201ENST00000361339 KIF15Q9NS87 1388 aa22.2■■□□□ 1.14
IFT140-201ENST00000361339 MRS2Q9HD23 443 aa22.2■■□□□ 1.14
IFT140-201ENST00000361339 MBD5Q9P267 1494 aa22.18■■□□□ 1.14
IFT140-201ENST00000361339 USP47Q96K76 1375 aa22.18■■□□□ 1.14
IFT140-201ENST00000361339 FANCIQ9NVI1 1328 aa22.15■■□□□ 1.14
IFT140-201ENST00000361339 CHD1O14646 1710 aa22.15■■□□□ 1.14
IFT140-201ENST00000361339 BCORL1Q5H9F3 1711 aa22.15■■□□□ 1.14
IFT140-201ENST00000361339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.15■■□□□ 1.14
IFT140-201ENST00000361339 DCAF11Q8TEB1 546 aa22.13■■□□□ 1.13
IFT140-201ENST00000361339 SAMD9LQ8IVG5 1584 aa22.13■■□□□ 1.13
IFT140-201ENST00000361339 B4GALNT3Q6L9W6 998 aa22.12■■□□□ 1.13
IFT140-201ENST00000361339 ANO8Q9HCE9 1232 aaPredicted RBP22.1■■□□□ 1.13
IFT140-201ENST00000361339 CDC42BPBQ9Y5S2 1711 aa22.1■■□□□ 1.13
IFT140-201ENST00000361339 RGL3Q3MIN7 710 aa22.1■■□□□ 1.13
IFT140-201ENST00000361339 CARD11Q9BXL7 1154 aa22.1■■□□□ 1.13
IFT140-201ENST00000361339 SHANK2Q9UPX8 1470 aa22.09■■□□□ 1.13
IFT140-201ENST00000361339 TTC37Q6PGP7 1564 aa22.08■■□□□ 1.13
IFT140-201ENST00000361339 SYCP2Q9BX26 1530 aa22.08■■□□□ 1.12
IFT140-201ENST00000361339 DHX29Q7Z478 1369 aaKnown RBP22.07■■□□□ 1.12
IFT140-201ENST00000361339 ST20-MTHFSA0A0A6YYL1 179 aa22.06■■□□□ 1.12
IFT140-201ENST00000361339 CCDC141Q6ZP82 1450 aa22.05■■□□□ 1.12
IFT140-201ENST00000361339 ARHGAP5Q13017 1502 aa22.04■■□□□ 1.12
IFT140-201ENST00000361339 KDM5CP41229 1560 aa22.03■■□□□ 1.12
IFT140-201ENST00000361339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms