RNA–Protein interactions for RNA: ENST00000361332.8

CTNND1-202, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-202ENST00000361332 B4GALNT3Q6L9W6 998 aa10.6□□□□□ -0.71
CTNND1-202ENST00000361332 NUDCQ9Y266 331 aa10.59□□□□□ -0.71
CTNND1-202ENST00000361332 VSIG10Q8N0Z9 540 aa10.59□□□□□ -0.71
CTNND1-202ENST00000361332 CHMP7Q8WUX9 453 aaPredicted RBP10.58□□□□□ -0.72
CTNND1-202ENST00000361332 GOLGA3Q08378 1498 aa10.58□□□□□ -0.72
CTNND1-202ENST00000361332 CTDP1Q9Y5B0 961 aaPredicted RBP10.58□□□□□ -0.72
CTNND1-202ENST00000361332 FRAT1Q92837 279 aaPredicted RBP10.58□□□□□ -0.72
CTNND1-202ENST00000361332 U2SURPO15042 1029 aaKnown RBP10.58□□□□□ -0.72
CTNND1-202ENST00000361332 HSP90AA2PQ14568 343 aaPredicted RBP10.57□□□□□ -0.72
CTNND1-202ENST00000361332 GORABQ5T7V8 394 aa10.57□□□□□ -0.72
CTNND1-202ENST00000361332 TCEAL9Q9UHQ7 104 aa10.57□□□□□ -0.72
CTNND1-202ENST00000361332 EEA1Q15075 1411 aa10.57□□□□□ -0.72
CTNND1-202ENST00000361332 HSP90B1P14625 803 aaKnown RBP10.56□□□□□ -0.72
CTNND1-202ENST00000361332 FRAT2O75474 233 aaPredicted RBP10.56□□□□□ -0.72
CTNND1-202ENST00000361332 CHMP3Q9Y3E7 222 aa10.56□□□□□ -0.72
CTNND1-202ENST00000361332 TNIKQ9UKE5 1360 aa10.56□□□□□ -0.72
CTNND1-202ENST00000361332 TAF7LQ5H9L4 462 aa10.56□□□□□ -0.72
CTNND1-202ENST00000361332 PAK3O75914 559 aaPredicted RBP10.56□□□□□ -0.72
CTNND1-202ENST00000361332 KNSTRNQ9Y448 316 aa10.56□□□□□ -0.72
CTNND1-202ENST00000361332 MCCP23508 829 aa10.55□□□□□ -0.72
CTNND1-202ENST00000361332 GTF2E1P29083 439 aaPredicted RBP10.55□□□□□ -0.72
CTNND1-202ENST00000361332 PATL2C9JE40 543 aaKnown RBP10.55□□□□□ -0.72
CTNND1-202ENST00000361332 HSCBQ8IWL3 235 aa10.55□□□□□ -0.72
CTNND1-202ENST00000361332 SPRYD3Q8NCJ5 442 aa10.55□□□□□ -0.72
CTNND1-202ENST00000361332 RAD21O60216 631 aa10.54□□□□□ -0.72
CTNND1-202ENST00000361332 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.54□□□□□ -0.721e-6■■■■■ 38.5
CTNND1-202ENST00000361332 CHMP4BQ9H444 224 aaKnown RBP10.53□□□□□ -0.72
CTNND1-202ENST00000361332 GOLGA6L1Q8N7Z2 621 aa10.52□□□□□ -0.72
CTNND1-202ENST00000361332 RTF1Q92541 710 aaKnown RBP10.52□□□□□ -0.72
CTNND1-202ENST00000361332 APBB1O00213 710 aa10.52□□□□□ -0.73
CTNND1-202ENST00000361332 GZF1Q9H116 711 aaPredicted RBP10.52□□□□□ -0.73
CTNND1-202ENST00000361332 TOMM22Q9NS69 142 aa10.52□□□□□ -0.73
CTNND1-202ENST00000361332 RSPH6AQ9H0K4 717 aa10.51□□□□□ -0.73
CTNND1-202ENST00000361332 TRIM34Q9BYJ4 488 aa10.51□□□□□ -0.73
CTNND1-202ENST00000361332 KIAA1211Q6ZU35 1233 aa10.5□□□□□ -0.73
CTNND1-202ENST00000361332 CDCA8Q53HL2 280 aa10.49□□□□□ -0.73
CTNND1-202ENST00000361332 MEX3CQ5U5Q3 659 aaKnown RBP10.49□□□□□ -0.73
CTNND1-202ENST00000361332 TPM4P67936 248 aa10.49□□□□□ -0.73
CTNND1-202ENST00000361332 PAF1Q8N7H5 531 aa10.49□□□□□ -0.73
CTNND1-202ENST00000361332 PES1O00541 588 aaKnown RBP10.48□□□□□ -0.73
CTNND1-202ENST00000361332 CCDC34Q96HJ3 373 aa10.48□□□□□ -0.73
CTNND1-202ENST00000361332 GOLGA6L3A6NEY3 463 aa10.48□□□□□ -0.73
CTNND1-202ENST00000361332 MTUS2Q5JR59 1369 aa10.48□□□□□ -0.73
CTNND1-202ENST00000361332 HDGFP51858 240 aaKnown RBP10.48□□□□□ -0.73
CTNND1-202ENST00000361332 TSHZ2Q9NRE2 1034 aa10.47□□□□□ -0.73
CTNND1-202ENST00000361332 RB1CC1Q8TDY2 1594 aa10.46□□□□□ -0.73
CTNND1-202ENST00000361332 WRNQ14191 1432 aaPredicted RBP eCLIP10.46□□□□□ -0.73
CTNND1-202ENST00000361332 FBXW7Q969H0 707 aa10.46□□□□□ -0.73
CTNND1-202ENST00000361332 CALRP27797 417 aaKnown RBP10.46□□□□□ -0.74
CTNND1-202ENST00000361332 GBP4Q96PP9 640 aa10.46□□□□□ -0.74
CTNND1-202ENST00000361332 TPM3P06753 285 aa10.45□□□□□ -0.74
CTNND1-202ENST00000361332 CEP164Q9UPV0 1460 aa10.45□□□□□ -0.74
CTNND1-202ENST00000361332 PTMSP20962 102 aa10.45□□□□□ -0.74
CTNND1-202ENST00000361332 SAMD1Q6SPF0 538 aaPredicted RBP10.45□□□□□ -0.74
CTNND1-202ENST00000361332 HTATSF1O43719 755 aaKnown RBP10.44□□□□□ -0.74
CTNND1-202ENST00000361332 SLKQ9H2G2 1235 aaPredicted RBP10.44□□□□□ -0.74
CTNND1-202ENST00000361332 SAFB2Q14151 953 aaKnown RBP eCLIP10.44□□□□□ -0.74
CTNND1-202ENST00000361332 SIN3AQ96ST3 1273 aa10.44□□□□□ -0.74
CTNND1-202ENST00000361332 RRP7BPQ9NSQ0 103 aa10.44□□□□□ -0.74
CTNND1-202ENST00000361332 SRPK2P78362 688 aaKnown RBP10.44□□□□□ -0.74
CTNND1-202ENST00000361332 MS4A1P11836 297 aa10.43□□□□□ -0.74
CTNND1-202ENST00000361332 IPO9Q96P70 1041 aaKnown RBP10.42□□□□□ -0.74
CTNND1-202ENST00000361332 PLEKHD1A6NEE1 506 aa10.42□□□□□ -0.74
CTNND1-202ENST00000361332 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.41□□□□□ -0.74
CTNND1-202ENST00000361332 RRP12Q5JTH9 1297 aaKnown RBP10.41□□□□□ -0.74
CTNND1-202ENST00000361332 TPD52L1Q16890 204 aaPredicted RBP10.41□□□□□ -0.74
CTNND1-202ENST00000361332 USP35Q9P2H5 1018 aa10.41□□□□□ -0.74
CTNND1-202ENST00000361332 TIMELESSQ9UNS1 1208 aa10.4□□□□□ -0.74
CTNND1-202ENST00000361332 SETQ01105 290 aaPredicted RBP10.4□□□□□ -0.74
CTNND1-202ENST00000361332 CCDC43Q96MW1 224 aaKnown RBP10.4□□□□□ -0.74
CTNND1-202ENST00000361332 PPM1FP49593 454 aaPredicted RBP10.4□□□□□ -0.75
CTNND1-202ENST00000361332 SOGA1O94964 1423 aa10.39□□□□□ -0.75
CTNND1-202ENST00000361332 CC2D1BQ5T0F9 858 aaKnown RBP10.39□□□□□ -0.75
CTNND1-202ENST00000361332 NOL10Q9BSC4 688 aaKnown RBP10.39□□□□□ -0.75
CTNND1-202ENST00000361332 R3HCC1Q9Y3T6 440 aaKnown RBP10.38□□□□□ -0.75
CTNND1-202ENST00000361332 SYAP1Q96A49 352 aaPredicted RBP10.38□□□□□ -0.75
CTNND1-202ENST00000361332 DHX16O60231 1041 aaKnown RBP10.37□□□□□ -0.75
CTNND1-202ENST00000361332 ZNF771Q7L3S4 317 aaPredicted RBP10.37□□□□□ -0.75
CTNND1-202ENST00000361332 TSR1Q2NL82 804 aaKnown RBP10.37□□□□□ -0.75
CTNND1-202ENST00000361332 CCAR1Q8IX12 1150 aaKnown RBP10.37□□□□□ -0.75
CTNND1-202ENST00000361332 GPATCH3Q96I76 525 aa10.37□□□□□ -0.75
CTNND1-202ENST00000361332 TPM2P07951 284 aa10.37□□□□□ -0.75
CTNND1-202ENST00000361332 STK26Q9P289 416 aa10.37□□□□□ -0.75
CTNND1-202ENST00000361332 AMOTL1Q8IY63 956 aa10.36□□□□□ -0.75
CTNND1-202ENST00000361332 CARD11Q9BXL7 1154 aa10.36□□□□□ -0.75
CTNND1-202ENST00000361332 TCERG1O14776 1098 aaKnown RBP10.36□□□□□ -0.75
CTNND1-202ENST00000361332 CCNB3Q8WWL7 1395 aa10.36□□□□□ -0.75
CTNND1-202ENST00000361332 CECR2Q9BXF3 1484 aa10.36□□□□□ -0.75
CTNND1-202ENST00000361332 PCMTD1Q96MG8 357 aaPredicted RBP10.35□□□□□ -0.75
CTNND1-202ENST00000361332 WDR70Q9NW82 654 aa10.35□□□□□ -0.75
CTNND1-202ENST00000361332 AKAP17AQ02040 695 aaKnown RBP10.35□□□□□ -0.75
CTNND1-202ENST00000361332 PPP1R1BQ9UD71 204 aaPredicted RBP10.35□□□□□ -0.75
CTNND1-202ENST00000361332 CALD1Q05682 793 aaKnown RBP10.34□□□□□ -0.75
CTNND1-202ENST00000361332 ODF2Q5BJF6 829 aa10.34□□□□□ -0.75
CTNND1-202ENST00000361332 CCER2I3L3R5 266 aa10.34□□□□□ -0.75
CTNND1-202ENST00000361332 EVA1CP58658 441 aa10.34□□□□□ -0.75
CTNND1-202ENST00000361332 CFAP44Q96MT7 982 aa10.34□□□□□ -0.75
CTNND1-202ENST00000361332 TMEM132AQ24JP5 1023 aa10.34□□□□□ -0.75
CTNND1-202ENST00000361332 AK7Q96M32 723 aa10.34□□□□□ -0.75
CTNND1-202ENST00000361332 SF3A1Q15459 793 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms