RNA–Protein interactions for RNA: ENST00000360752.4

RDH16-201, Transcript of retinol dehydrogenase 16, humanhuman

TSL 1 (best)

Gene RDH16, Length 3,198 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH16-201ENST00000360752 KDM2AQ9Y2K7 1162 aa13.2□□□□□ -0.3
RDH16-201ENST00000360752 MYT1LQ9UL68 1186 aa13.2□□□□□ -0.3
RDH16-201ENST00000360752 CDK13Q14004 1512 aaKnown RBP13.2□□□□□ -0.3
RDH16-201ENST00000360752 GAPVD1Q14C86 1478 aa13.19□□□□□ -0.3
RDH16-201ENST00000360752 CTTNBP2Q8WZ74 1663 aa13.19□□□□□ -0.3
RDH16-201ENST00000360752 MAGI3Q5TCQ9 1506 aa13.19□□□□□ -0.3
RDH16-201ENST00000360752 KDM5BQ9UGL1 1544 aa13.19□□□□□ -0.3
RDH16-201ENST00000360752 EIF5BO60841 1220 aaKnown RBP13.19□□□□□ -0.3
RDH16-201ENST00000360752 NOP58Q9Y2X3 529 aaKnown RBP13.18□□□□□ -0.3
RDH16-201ENST00000360752 SUPT6HQ7KZ85 1726 aaKnown RBP13.18□□□□□ -0.3
RDH16-201ENST00000360752 ZBED9Q6R2W3 1325 aa13.18□□□□□ -0.3
RDH16-201ENST00000360752 RTL5Q5HYW3 569 aaPredicted RBP13.18□□□□□ -0.3
RDH16-201ENST00000360752 GRIN2BQ13224 1484 aa13.16□□□□□ -0.3
RDH16-201ENST00000360752 TMC1Q8TDI8 760 aa13.16□□□□□ -0.3
RDH16-201ENST00000360752 DENND4BO75064 1496 aaPredicted RBP13.16□□□□□ -0.3
RDH16-201ENST00000360752 LRRIQ1Q96JM4 1722 aa13.16□□□□□ -0.3
RDH16-201ENST00000360752 URB2Q14146 1524 aaKnown RBP13.15□□□□□ -0.3
RDH16-201ENST00000360752 EHBP1L1Q8N3D4 1523 aa13.15□□□□□ -0.3
RDH16-201ENST00000360752 FBLN2P98095 1184 aa13.15□□□□□ -0.3
RDH16-201ENST00000360752 CUL7Q14999 1698 aa13.14□□□□□ -0.31
RDH16-201ENST00000360752 NCOA1Q15788 1441 aa13.13□□□□□ -0.31
RDH16-201ENST00000360752 UGGT2Q9NYU1 1516 aa13.12□□□□□ -0.31
RDH16-201ENST00000360752 ANP32AP39687 249 aaKnown RBP13.12□□□□□ -0.31
RDH16-201ENST00000360752 PKD2Q13563 968 aa13.12□□□□□ -0.31
RDH16-201ENST00000360752 CFDP1Q9UEE9 299 aaPredicted RBP13.1□□□□□ -0.31
RDH16-201ENST00000360752 EPRSP07814 1512 aaKnown RBP13.1□□□□□ -0.31
RDH16-201ENST00000360752 NUDCQ9Y266 331 aa13.1□□□□□ -0.31
RDH16-201ENST00000360752 CARD11Q9BXL7 1154 aa13.09□□□□□ -0.31
RDH16-201ENST00000360752 ANKRD30BQ9BXX2 1392 aa13.09□□□□□ -0.31
RDH16-201ENST00000360752 THOC2Q8NI27 1593 aaKnown RBP13.09□□□□□ -0.31
RDH16-201ENST00000360752 ERICH6BQ5W0A0 696 aa13.09□□□□□ -0.31
RDH16-201ENST00000360752 PDS5BQ9NTI5 1447 aa13.09□□□□□ -0.31
RDH16-201ENST00000360752 USP47Q96K76 1375 aa13.09□□□□□ -0.31
RDH16-201ENST00000360752 SAMD9Q5K651 1589 aa13.07□□□□□ -0.32
RDH16-201ENST00000360752 UBE2Q2Q8WVN8 375 aa13.07□□□□□ -0.32
RDH16-201ENST00000360752 ZBTB47Q9UFB7 747 aaPredicted RBP13.06□□□□□ -0.32
RDH16-201ENST00000360752 DAPK1P53355 1430 aa13.06□□□□□ -0.32
RDH16-201ENST00000360752 LAS1LQ9Y4W2 734 aaKnown RBP13.06□□□□□ -0.32
RDH16-201ENST00000360752 RGL3Q3MIN7 710 aa13.05□□□□□ -0.32
RDH16-201ENST00000360752 SKAP1Q86WV1 359 aa13.05□□□□□ -0.32
RDH16-201ENST00000360752 RPRD2Q5VT52 1461 aaKnown RBP13.04□□□□□ -0.32
RDH16-201ENST00000360752 HECW1Q76N89 1606 aa13.04□□□□□ -0.32
RDH16-201ENST00000360752 ST20-MTHFSA0A0A6YYL1 179 aa13.04□□□□□ -0.32
RDH16-201ENST00000360752 DCAF11Q8TEB1 546 aa13.04□□□□□ -0.32
RDH16-201ENST00000360752 LAMC3Q9Y6N6 1575 aa13.04□□□□□ -0.32
RDH16-201ENST00000360752 ABCC5O15440 1437 aa13.03□□□□□ -0.32
RDH16-201ENST00000360752 EXOC6Q8TAG9 804 aa13.03□□□□□ -0.32
RDH16-201ENST00000360752 TEX14Q8IWB6 1497 aa13.01□□□□□ -0.33
RDH16-201ENST00000360752 PLIN1O60240 522 aa13.01□□□□□ -0.33
RDH16-201ENST00000360752 TCOF1Q13428 1488 aaKnown RBP13.01□□□□□ -0.33
RDH16-201ENST00000360752 CC2D1BQ5T0F9 858 aaKnown RBP13.01□□□□□ -0.33
RDH16-201ENST00000360752 PRG4Q92954 1404 aaPredicted RBP13.01□□□□□ -0.33
RDH16-201ENST00000360752 GCC2Q8IWJ2 1684 aa13.01□□□□□ -0.33
RDH16-201ENST00000360752 PNISRQ8TF01 805 aaKnown RBP13□□□□□ -0.33
RDH16-201ENST00000360752 IPO9Q96P70 1041 aaKnown RBP13□□□□□ -0.33
RDH16-201ENST00000360752 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13□□□□□ -0.33
RDH16-201ENST00000360752 ABCA5Q8WWZ7 1642 aa13□□□□□ -0.33
RDH16-201ENST00000360752 MIA2Q96PC5 1412 aa13□□□□□ -0.33
RDH16-201ENST00000360752 DHX29Q7Z478 1369 aaKnown RBP12.99□□□□□ -0.33
RDH16-201ENST00000360752 SMG6Q86US8 1419 aaKnown RBP12.99□□□□□ -0.33
RDH16-201ENST00000360752 NUP155O75694 1391 aa12.99□□□□□ -0.33
RDH16-201ENST00000360752 IQGAP2Q13576 1575 aa12.98□□□□□ -0.33
RDH16-201ENST00000360752 ARHGEF11O15085 1522 aa12.98□□□□□ -0.33
RDH16-201ENST00000360752 SPATA31E1Q6ZUB1 1445 aa12.98□□□□□ -0.33
RDH16-201ENST00000360752 CDCA7LQ96GN5 454 aa12.98□□□□□ -0.33
RDH16-201ENST00000360752 BRPF3Q9ULD4 1205 aa12.97□□□□□ -0.33
RDH16-201ENST00000360752 RCAN3Q9UKA8 241 aa12.95□□□□□ -0.34
RDH16-201ENST00000360752 NEFMP07197 916 aa12.95□□□□□ -0.34
RDH16-201ENST00000360752 RRP1P56182 461 aaKnown RBP12.95□□□□□ -0.34
RDH16-201ENST00000360752 CHMP7Q8WUX9 453 aaPredicted RBP12.95□□□□□ -0.34
RDH16-201ENST00000360752 HNRNPMP52272 730 aaKnown RBP eCLIP12.94□□□□□ -0.34
RDH16-201ENST00000360752 WDR62O43379 1518 aa12.93□□□□□ -0.34
RDH16-201ENST00000360752 TSPY4P0CV99 314 aa12.93□□□□□ -0.34
RDH16-201ENST00000360752 TSPY10P0CW01 314 aa12.93□□□□□ -0.34
RDH16-201ENST00000360752 PZPP20742 1482 aa12.93□□□□□ -0.34
RDH16-201ENST00000360752 ROCK2O75116 1388 aaKnown RBP12.92□□□□□ -0.34
RDH16-201ENST00000360752 ROCK1Q13464 1354 aa12.92□□□□□ -0.34
RDH16-201ENST00000360752 KIAA1107Q9UPP5 1409 aa12.92□□□□□ -0.34
RDH16-201ENST00000360752 ZNF608Q9ULD9 1512 aaPredicted RBP12.92□□□□□ -0.34
RDH16-201ENST00000360752 KIF21AQ7Z4S6 1674 aa12.91□□□□□ -0.34
RDH16-201ENST00000360752 BCORL1Q5H9F3 1711 aa12.91□□□□□ -0.34
RDH16-201ENST00000360752 MYBBP1AQ9BQG0 1328 aaKnown RBP12.91□□□□□ -0.34
RDH16-201ENST00000360752 NUP153P49790 1475 aaKnown RBP12.91□□□□□ -0.34
RDH16-201ENST00000360752 CAMSAP2Q08AD1 1489 aa12.91□□□□□ -0.34
RDH16-201ENST00000360752 SLC4A3P48751 1232 aa12.91□□□□□ -0.34
RDH16-201ENST00000360752 KIF15Q9NS87 1388 aa12.91□□□□□ -0.34
RDH16-201ENST00000360752 PLB1Q6P1J6 1458 aa12.91□□□□□ -0.34
RDH16-201ENST00000360752 NBPF1Q3BBV0 1214 aa12.9□□□□□ -0.34
RDH16-201ENST00000360752 ANKRD30AQ9BXX3 1397 aa12.9□□□□□ -0.34
RDH16-201ENST00000360752 ANKRD50Q9ULJ7 1429 aa12.9□□□□□ -0.34
RDH16-201ENST00000360752 PDE4AP27815 886 aa12.9□□□□□ -0.34
RDH16-201ENST00000360752 PLEKHD1A6NEE1 506 aa12.89□□□□□ -0.35
RDH16-201ENST00000360752 DNMT1P26358 1616 aaKnown RBP12.88□□□□□ -0.35
RDH16-201ENST00000360752 PKNOX2Q96KN3 472 aa12.87□□□□□ -0.35
RDH16-201ENST00000360752 CRBNQ96SW2 442 aa12.87□□□□□ -0.35
RDH16-201ENST00000360752 NLRP13Q86W25 1043 aa12.86□□□□□ -0.35
RDH16-201ENST00000360752 KTN1Q86UP2 1357 aaKnown RBP12.86□□□□□ -0.35
RDH16-201ENST00000360752 RALBP1Q15311 655 aa12.85□□□□□ -0.35
RDH16-201ENST00000360752 TARBP1Q13395 1621 aaKnown RBP12.85□□□□□ -0.35
RDH16-201ENST00000360752 RNF123Q5XPI4 1314 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms