RNA–Protein interactions for RNA: ENST00000360428.8

DSC3-201, Transcript of desmocollin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSC3, Length 6,939 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSC3-201ENST00000360428 CEP162Q5TB80 1403 aa7.44□□□□□ -1.22
DSC3-201ENST00000360428 CHMP7Q8WUX9 453 aaPredicted RBP7.44□□□□□ -1.22
DSC3-201ENST00000360428 CLSTN1O94985 981 aa7.44□□□□□ -1.22
DSC3-201ENST00000360428 RGL3Q3MIN7 710 aa7.43□□□□□ -1.22
DSC3-201ENST00000360428 AMER1Q5JTC6 1135 aaPredicted RBP7.43□□□□□ -1.22
DSC3-201ENST00000360428 POGKQ9P215 609 aa7.43□□□□□ -1.22
DSC3-201ENST00000360428 RBM19Q9Y4C8 960 aaKnown RBP7.43□□□□□ -1.22
DSC3-201ENST00000360428 PMFBP1Q8TBY8 1022 aa7.43□□□□□ -1.22
DSC3-201ENST00000360428 RWDD1Q9H446 243 aaPredicted RBP7.43□□□□□ -1.22
DSC3-201ENST00000360428 A0A0U1RQG5 324 aaPredicted RBP7.43□□□□□ -1.22
DSC3-201ENST00000360428 RSPH6AQ9H0K4 717 aa7.42□□□□□ -1.22
DSC3-201ENST00000360428 BAZ1AQ9NRL2 1556 aaPredicted RBP7.42□□□□□ -1.22
DSC3-201ENST00000360428 TAOK2Q9UL54 1235 aa7.42□□□□□ -1.22
DSC3-201ENST00000360428 U2SURPO15042 1029 aaKnown RBP7.41□□□□□ -1.22
DSC3-201ENST00000360428 CEP164Q9UPV0 1460 aa7.41□□□□□ -1.22
DSC3-201ENST00000360428 CC2D1BQ5T0F9 858 aaKnown RBP7.41□□□□□ -1.22
DSC3-201ENST00000360428 HDGFP51858 240 aaKnown RBP7.41□□□□□ -1.22
DSC3-201ENST00000360428 GPATCH3Q96I76 525 aa7.41□□□□□ -1.22
DSC3-201ENST00000360428 HDAC5Q9UQL6 1122 aa7.41□□□□□ -1.22
DSC3-201ENST00000360428 KANK1Q14678 1352 aa7.41□□□□□ -1.22
DSC3-201ENST00000360428 CFDP1Q9UEE9 299 aaPredicted RBP7.4□□□□□ -1.22
DSC3-201ENST00000360428 RTF1Q92541 710 aaKnown RBP7.4□□□□□ -1.23
DSC3-201ENST00000360428 KTN1Q86UP2 1357 aaKnown RBP7.4□□□□□ -1.23
DSC3-201ENST00000360428 TNIKQ9UKE5 1360 aa7.4□□□□□ -1.23
DSC3-201ENST00000360428 TPM3P06753 285 aa7.39□□□□□ -1.23
DSC3-201ENST00000360428 GPS2Q13227 327 aa7.39□□□□□ -1.23
DSC3-201ENST00000360428 SPRYD3Q8NCJ5 442 aa7.39□□□□□ -1.23
DSC3-201ENST00000360428 CHMP4CQ96CF2 233 aa7.39□□□□□ -1.23
DSC3-201ENST00000360428 DDX11L8A8MPP1 907 aa7.39□□□□□ -1.23
DSC3-201ENST00000360428 HSP90AA2PQ14568 343 aaPredicted RBP7.39□□□□□ -1.23
DSC3-201ENST00000360428 IPO9Q96P70 1041 aaKnown RBP7.38□□□□□ -1.23
DSC3-201ENST00000360428 KIF3AQ9Y496 699 aa7.38□□□□□ -1.23
DSC3-201ENST00000360428 MORC1Q86VD1 984 aa7.38□□□□□ -1.23
DSC3-201ENST00000360428 CEP89Q96ST8 783 aa7.38□□□□□ -1.23
DSC3-201ENST00000360428 RALBP1Q15311 655 aa7.37□□□□□ -1.23
DSC3-201ENST00000360428 SKOR2Q2VWA4 1001 aaPredicted RBP7.37□□□□□ -1.23
DSC3-201ENST00000360428 CCDC70Q6NSX1 233 aa7.37□□□□□ -1.23
DSC3-201ENST00000360428 FHAD1B1AJZ9 1412 aa7.37□□□□□ -1.23
DSC3-201ENST00000360428 CALRP27797 417 aaKnown RBP7.37□□□□□ -1.23
DSC3-201ENST00000360428 PLEKHG5O94827 1062 aa7.37□□□□□ -1.23
DSC3-201ENST00000360428 RCAN3Q9UKA8 241 aa7.37□□□□□ -1.23
DSC3-201ENST00000360428 KIF27Q86VH2 1401 aa7.37□□□□□ -1.23
DSC3-201ENST00000360428 SMARCA2P51531 1590 aa7.37□□□□□ -1.23
DSC3-201ENST00000360428 HMMRO75330 724 aa7.36□□□□□ -1.23
DSC3-201ENST00000360428 SMARCA4P51532 1647 aa7.36□□□□□ -1.23
DSC3-201ENST00000360428 GZF1Q9H116 711 aaPredicted RBP7.36□□□□□ -1.23
DSC3-201ENST00000360428 KCNH8Q96L42 1107 aa7.36□□□□□ -1.23
DSC3-201ENST00000360428 PEG3Q9GZU2 1588 aa7.35□□□□□ -1.23
DSC3-201ENST00000360428 ST18O60284 1047 aa7.35□□□□□ -1.23
DSC3-201ENST00000360428 TSR1Q2NL82 804 aaKnown RBP7.35□□□□□ -1.23
DSC3-201ENST00000360428 HDGFL2Q7Z4V5 671 aaPredicted RBP7.35□□□□□ -1.23
DSC3-201ENST00000360428 ISY1Q9ULR0 285 aaKnown RBP7.35□□□□□ -1.23
DSC3-201ENST00000360428 PHLDB1Q86UU1 1377 aa7.35□□□□□ -1.23
DSC3-201ENST00000360428 TPM2P07951 284 aa7.34□□□□□ -1.23
DSC3-201ENST00000360428 HSP90B1P14625 803 aaKnown RBP7.34□□□□□ -1.23
DSC3-201ENST00000360428 TEX35Q5T0J7 233 aa7.34□□□□□ -1.23
DSC3-201ENST00000360428 CCNB3Q8WWL7 1395 aa7.34□□□□□ -1.23
DSC3-201ENST00000360428 ITPRIPQ8IWB1 547 aa7.34□□□□□ -1.23
DSC3-201ENST00000360428 KIF16BQ96L93 1317 aa7.34□□□□□ -1.23
DSC3-201ENST00000360428 TPM1P09493 284 aa7.34□□□□□ -1.24
DSC3-201ENST00000360428 PDE3BQ13370 1112 aa7.33□□□□□ -1.24
DSC3-201ENST00000360428 ATP6V1DQ9Y5K8 247 aa7.33□□□□□ -1.24
DSC3-201ENST00000360428 SLKQ9H2G2 1235 aaPredicted RBP7.33□□□□□ -1.24
DSC3-201ENST00000360428 LMOD2Q6P5Q4 547 aa7.33□□□□□ -1.24
DSC3-201ENST00000360428 PRM3Q9NNZ6 103 aa7.33□□□□□ -1.24
DSC3-201ENST00000360428 EIF3AQ14152 1382 aaKnown RBP7.33□□□□□ -1.24
DSC3-201ENST00000360428 SETD5Q9C0A6 1442 aa7.32□□□□□ -1.24
DSC3-201ENST00000360428 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.32□□□□□ -1.24
DSC3-201ENST00000360428 NCBP3Q53F19 620 aaKnown RBP7.32□□□□□ -1.24
DSC3-201ENST00000360428 SRPK2P78362 688 aaKnown RBP7.32□□□□□ -1.24
DSC3-201ENST00000360428 ARID3AQ99856 593 aa7.32□□□□□ -1.24
DSC3-201ENST00000360428 TMX4Q9H1E5 349 aaPredicted RBP7.32□□□□□ -1.24
DSC3-201ENST00000360428 SPAG9O60271 1321 aaKnown RBP7.32□□□□□ -1.24
DSC3-201ENST00000360428 MFAP1P55081 439 aaKnown RBP7.32□□□□□ -1.24
DSC3-201ENST00000360428 SENP3-EIF4A1A0A087X0R7 540 aa7.32□□□□□ -1.24
DSC3-201ENST00000360428 GOLGA6L19H0YKK7 550 aa7.32□□□□□ -1.24
DSC3-201ENST00000360428 DCAF11Q8TEB1 546 aa7.32□□□□□ -1.24
DSC3-201ENST00000360428 SIN3AQ96ST3 1273 aa7.31□□□□□ -1.24
DSC3-201ENST00000360428 WRNQ14191 1432 aaPredicted RBP eCLIP7.31□□□□□ -1.24
DSC3-201ENST00000360428 NOM1Q5C9Z4 860 aaKnown RBP7.31□□□□□ -1.24
DSC3-201ENST00000360428 RASSF8Q8NHQ8 419 aa7.31□□□□□ -1.24
DSC3-201ENST00000360428 TPD52L1Q16890 204 aaPredicted RBP7.31□□□□□ -1.24
DSC3-201ENST00000360428 ZNF771Q7L3S4 317 aaPredicted RBP7.31□□□□□ -1.24
DSC3-201ENST00000360428 STK31Q9BXU1 1019 aa7.31□□□□□ -1.24
DSC3-201ENST00000360428 LMOD3Q0VAK6 560 aa7.31□□□□□ -1.24
DSC3-201ENST00000360428 TRIM6-TRIM34B2RNG4 842 aa7.31□□□□□ -1.24
DSC3-201ENST00000360428 GORABQ5T7V8 394 aa7.31□□□□□ -1.24
DSC3-201ENST00000360428 SF3A1Q15459 793 aaKnown RBP7.3□□□□□ -1.24
DSC3-201ENST00000360428 ABCC8Q09428 1581 aa7.3□□□□□ -1.24
DSC3-201ENST00000360428 ARHGAP35Q9NRY4 1499 aa7.3□□□□□ -1.24
DSC3-201ENST00000360428 SENP3Q9H4L4 574 aaPredicted RBP7.3□□□□□ -1.24
DSC3-201ENST00000360428 ROCK2O75116 1388 aaKnown RBP7.3□□□□□ -1.24
DSC3-201ENST00000360428 HSPA5P11021 654 aaKnown RBP7.3□□□□□ -1.24
DSC3-201ENST00000360428 CDR1P51861 262 aa7.29□□□□□ -1.24
DSC3-201ENST00000360428 ACBD3Q9H3P7 528 aa7.29□□□□□ -1.24
DSC3-201ENST00000360428 RUSC2Q8N2Y8 1516 aa7.28□□□□□ -1.24
DSC3-201ENST00000360428 H3BQV1 296 aa7.28□□□□□ -1.24
DSC3-201ENST00000360428 APBB1O00213 710 aa7.28□□□□□ -1.24
DSC3-201ENST00000360428 GSE1Q14687 1217 aa7.28□□□□□ -1.24
DSC3-201ENST00000360428 TAF7LQ5H9L4 462 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms