RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 CAMSAP2Q08AD1 1489 aa26.46■■□□□ 1.83
PDLIM7-203ENST00000359895 ERCC6L2Q5T890 1561 aa26.46■■□□□ 1.83
PDLIM7-203ENST00000359895 PLEKHD1A6NEE1 506 aa26.46■■□□□ 1.83
PDLIM7-203ENST00000359895 RRP7BPQ9NSQ0 103 aa26.46■■□□□ 1.83
PDLIM7-203ENST00000359895 ADGBQ8N7X0 1667 aa26.45■■□□□ 1.83
PDLIM7-203ENST00000359895 CDC42BPAQ5VT25 1732 aa26.45■■□□□ 1.83
PDLIM7-203ENST00000359895 ABCC5O15440 1437 aa26.45■■□□□ 1.83
PDLIM7-203ENST00000359895 SIN3AQ96ST3 1273 aa26.45■■□□□ 1.82
PDLIM7-203ENST00000359895 CHIC2Q9UKJ5 165 aa26.45■■□□□ 1.82
PDLIM7-203ENST00000359895 CROCC2H7BZ55 1655 aa26.43■■□□□ 1.82
PDLIM7-203ENST00000359895 NEUROD1Q13562 356 aa26.42■■□□□ 1.82
PDLIM7-203ENST00000359895 CFDP1Q9UEE9 299 aaPredicted RBP26.41■■□□□ 1.82
PDLIM7-203ENST00000359895 KDM6BO15054 1643 aa26.4■■□□□ 1.82
PDLIM7-203ENST00000359895 ABCC10Q5T3U5 1492 aa26.4■■□□□ 1.82
PDLIM7-203ENST00000359895 ZNF644Q9H582 1327 aaPredicted RBP26.36■■□□□ 1.81
PDLIM7-203ENST00000359895 TONSLQ96HA7 1378 aa26.33■■□□□ 1.81
PDLIM7-203ENST00000359895 ADGRL2O95490 1459 aa26.32■■□□□ 1.8
PDLIM7-203ENST00000359895 PPP1R15AO75807 674 aaPredicted RBP26.32■■□□□ 1.8
PDLIM7-203ENST00000359895 TRIM52Q96A61 297 aa26.3■■□□□ 1.8
PDLIM7-203ENST00000359895 ABCC2Q92887 1545 aa26.3■■□□□ 1.8
PDLIM7-203ENST00000359895 SHANK2Q9UPX8 1470 aa26.27■■□□□ 1.8
PDLIM7-203ENST00000359895 PREX2Q70Z35 1606 aa26.26■■□□□ 1.79
PDLIM7-203ENST00000359895 DENND4BO75064 1496 aaPredicted RBP26.26■■□□□ 1.79
PDLIM7-203ENST00000359895 MIER1Q8N108 512 aa26.26■■□□□ 1.79
PDLIM7-203ENST00000359895 NCOA1Q15788 1441 aa26.25■■□□□ 1.79
PDLIM7-203ENST00000359895 ARHGEF5Q12774 1597 aa26.24■■□□□ 1.79
PDLIM7-203ENST00000359895 MPHOSPH9Q99550 1183 aa26.24■■□□□ 1.79
PDLIM7-203ENST00000359895 ZNF777Q9ULD5 760 aaPredicted RBP26.24■■□□□ 1.79
PDLIM7-203ENST00000359895 CDC42BPBQ9Y5S2 1711 aa26.23■■□□□ 1.79
PDLIM7-203ENST00000359895 CENPBP07199 599 aaPredicted RBP26.22■■□□□ 1.79
PDLIM7-203ENST00000359895 ANKRD30AQ9BXX3 1397 aa26.22■■□□□ 1.79
PDLIM7-203ENST00000359895 CYB5RLQ6IPT4 315 aa26.21■■□□□ 1.79
PDLIM7-203ENST00000359895 UHRF1BP1LA0JNW5 1464 aa26.2■■□□□ 1.78
PDLIM7-203ENST00000359895 MYO5CQ9NQX4 1742 aa26.16■■□□□ 1.78
PDLIM7-203ENST00000359895 KDM5BQ9UGL1 1544 aa26.15■■□□□ 1.78
PDLIM7-203ENST00000359895 SAMD9LQ8IVG5 1584 aa26.14■■□□□ 1.78
PDLIM7-203ENST00000359895 ZCCHC11Q5TAX3 1644 aaKnown RBP26.14■■□□□ 1.77
PDLIM7-203ENST00000359895 C9orf84Q5VXU9 1444 aa26.13■■□□□ 1.77
PDLIM7-203ENST00000359895 TTC37Q6PGP7 1564 aa26.11■■□□□ 1.77
PDLIM7-203ENST00000359895 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.11■■□□□ 1.772e-7■■□□□ 13
PDLIM7-203ENST00000359895 RSPH4AQ5TD94 716 aa26.1■■□□□ 1.77
PDLIM7-203ENST00000359895 ANKRD30BQ9BXX2 1392 aa26.09■■□□□ 1.77
PDLIM7-203ENST00000359895 PZPP20742 1482 aa26.09■■□□□ 1.77
PDLIM7-203ENST00000359895 MBD5Q9P267 1494 aa26.09■■□□□ 1.77
PDLIM7-203ENST00000359895 TSPY4P0CV99 314 aa26.08■■□□□ 1.77
PDLIM7-203ENST00000359895 TSPY10P0CW01 314 aa26.08■■□□□ 1.77
PDLIM7-203ENST00000359895 CCDC141Q6ZP82 1450 aa26.08■■□□□ 1.77
PDLIM7-203ENST00000359895 ANKRD50Q9ULJ7 1429 aa26.08■■□□□ 1.76
PDLIM7-203ENST00000359895 SLC4A1APQ9BWU0 796 aaKnown RBP26.07■■□□□ 1.76
PDLIM7-203ENST00000359895 RPRD2Q5VT52 1461 aaKnown RBP26.06■■□□□ 1.76
PDLIM7-203ENST00000359895 ARHGAP5Q13017 1502 aa26.05■■□□□ 1.76
PDLIM7-203ENST00000359895 MAST1Q9Y2H9 1570 aa26.05■■□□□ 1.76
PDLIM7-203ENST00000359895 PLEKHH2Q8IVE3 1493 aa26.05■■□□□ 1.76
PDLIM7-203ENST00000359895 KDM5DQ9BY66 1539 aa26.02■■□□□ 1.76
PDLIM7-203ENST00000359895 HNRNPMP52272 730 aaKnown RBP eCLIP26■■□□□ 1.751e-7■■■□□ 16.6
PDLIM7-203ENST00000359895 KIAA1107Q9UPP5 1409 aa25.99■■□□□ 1.75
PDLIM7-203ENST00000359895 SYCP2Q9BX26 1530 aa25.98■■□□□ 1.75
PDLIM7-203ENST00000359895 KIF15Q9NS87 1388 aa25.97■■□□□ 1.75
PDLIM7-203ENST00000359895 FOXD1Q16676 465 aa25.97■■□□□ 1.75
PDLIM7-203ENST00000359895 TEX14Q8IWB6 1497 aa25.95■■□□□ 1.74
PDLIM7-203ENST00000359895 PLXNC1O60486 1568 aa25.94■■□□□ 1.74
PDLIM7-203ENST00000359895 PLCH2O75038 1416 aa25.94■■□□□ 1.74
PDLIM7-203ENST00000359895 L3MBTL2Q969R5 705 aa25.92■■□□□ 1.74
PDLIM7-203ENST00000359895 SCAF1Q9H7N4 1312 aaKnown RBP25.91■■□□□ 1.74
PDLIM7-203ENST00000359895 ARAP3Q8WWN8 1544 aa25.91■■□□□ 1.74
PDLIM7-203ENST00000359895 YTHDC1Q96MU7 727 aaKnown RBP25.9■■□□□ 1.74
PDLIM7-203ENST00000359895 NUP155O75694 1391 aa25.89■■□□□ 1.74
PDLIM7-203ENST00000359895 KCNH8Q96L42 1107 aa25.88■■□□□ 1.73
PDLIM7-203ENST00000359895 DDX10Q13206 875 aaKnown RBP25.87■■□□□ 1.73
PDLIM7-203ENST00000359895 PKD2Q13563 968 aa25.86■■□□□ 1.73
PDLIM7-203ENST00000359895 UNC13BO14795 1591 aa25.85■■□□□ 1.73
PDLIM7-203ENST00000359895 EFCAB2Q5VUJ9 269 aa25.85■■□□□ 1.73
PDLIM7-203ENST00000359895 ABCC1P33527 1531 aa25.85■■□□□ 1.73
PDLIM7-203ENST00000359895 WDR7Q9Y4E6 1490 aa25.83■■□□□ 1.73
PDLIM7-203ENST00000359895 HIRIP3Q9BW71 556 aaPredicted RBP25.82■■□□□ 1.72
PDLIM7-203ENST00000359895 DUOX2Q9NRD8 1548 aa25.81■■□□□ 1.72
PDLIM7-203ENST00000359895 EIF4G2P78344 907 aaKnown RBP eCLIP25.8■■□□□ 1.72
PDLIM7-203ENST00000359895 ARHGEF12Q9NZN5 1544 aa25.79■■□□□ 1.72
PDLIM7-203ENST00000359895 FAM135AQ9P2D6 1515 aa25.79■■□□□ 1.72
PDLIM7-203ENST00000359895 TRHP20396 242 aaPredicted RBP25.78■■□□□ 1.72
PDLIM7-203ENST00000359895 ABCA9Q8IUA7 1624 aa25.78■■□□□ 1.72
PDLIM7-203ENST00000359895 HSPA5P11021 654 aaKnown RBP25.77■■□□□ 1.72
PDLIM7-203ENST00000359895 IQGAP3Q86VI3 1631 aa25.75■■□□□ 1.71
PDLIM7-203ENST00000359895 POLR1AO95602 1720 aaPredicted RBP25.75■■□□□ 1.71
PDLIM7-203ENST00000359895 ERBINQ96RT1 1412 aa25.74■■□□□ 1.71
PDLIM7-203ENST00000359895 NPM1P06748 294 aaKnown RBP eCLIP25.73■■□□□ 1.71
PDLIM7-203ENST00000359895 NBPF8Q3BBV2 869 aa25.72■■□□□ 1.71
PDLIM7-203ENST00000359895 RTEL1-TNFRSF6BF6WH68 1400 aa25.7■■□□□ 1.7
PDLIM7-203ENST00000359895 MAGI2Q86UL8 1455 aa25.7■■□□□ 1.7
PDLIM7-203ENST00000359895 ANP32CO43423 234 aa25.69■■□□□ 1.7
PDLIM7-203ENST00000359895 CCER2I3L3R5 266 aa25.67■■□□□ 1.7
PDLIM7-203ENST00000359895 GTF3C3Q9Y5Q9 886 aa25.67■■□□□ 1.7
PDLIM7-203ENST00000359895 UHRF1BP1Q6BDS2 1440 aa25.67■■□□□ 1.7
PDLIM7-203ENST00000359895 TRAPPC8Q9Y2L5 1435 aa25.67■■□□□ 1.7
PDLIM7-203ENST00000359895 ASXL2Q76L83 1435 aa25.66■■□□□ 1.7
PDLIM7-203ENST00000359895 FANCAO15360 1455 aa25.64■■□□□ 1.69
PDLIM7-203ENST00000359895 SPATA31E1Q6ZUB1 1445 aa25.63■■□□□ 1.69
PDLIM7-203ENST00000359895 ZFYVE16Q7Z3T8 1539 aa25.63■■□□□ 1.69
PDLIM7-203ENST00000359895 WASHC2AQ641Q2 1341 aa25.62■■□□□ 1.69
PDLIM7-203ENST00000359895 KIF13AQ9H1H9 1805 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms