RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 DENND4BO75064 1496 aaPredicted RBP22.58■■□□□ 1.2
PHTF1-201ENST00000357783 TROQ12816 1431 aaPredicted RBP22.57■■□□□ 1.2
PHTF1-201ENST00000357783 ABCC5O15440 1437 aa22.56■■□□□ 1.2
PHTF1-201ENST00000357783 KDM5BQ9UGL1 1544 aa22.53■■□□□ 1.2
PHTF1-201ENST00000357783 KIF14Q15058 1648 aa22.52■■□□□ 1.2
PHTF1-201ENST00000357783 ROCK1Q13464 1354 aa22.52■■□□□ 1.2
PHTF1-201ENST00000357783 MPHOSPH9Q99550 1183 aa22.52■■□□□ 1.2
PHTF1-201ENST00000357783 ITSN2Q9NZM3 1697 aa22.5■■□□□ 1.19
PHTF1-201ENST00000357783 KCNH8Q96L42 1107 aa22.5■■□□□ 1.19
PHTF1-201ENST00000357783 CAMSAP2Q08AD1 1489 aa22.49■■□□□ 1.19
PHTF1-201ENST00000357783 CFDP1Q9UEE9 299 aaPredicted RBP22.49■■□□□ 1.19
PHTF1-201ENST00000357783 ADCY10Q96PN6 1610 aa22.49■■□□□ 1.19
PHTF1-201ENST00000357783 FOXD1Q16676 465 aa22.47■■□□□ 1.19
PHTF1-201ENST00000357783 GPATCH8Q9UKJ3 1502 aaKnown RBP22.47■■□□□ 1.19
PHTF1-201ENST00000357783 ZNF777Q9ULD5 760 aaPredicted RBP22.45■■□□□ 1.18
PHTF1-201ENST00000357783 ABCA8O94911 1581 aa22.45■■□□□ 1.18
PHTF1-201ENST00000357783 ADGBQ8N7X0 1667 aa22.4■■□□□ 1.18
PHTF1-201ENST00000357783 ATP10BO94823 1461 aa22.39■■□□□ 1.17
PHTF1-201ENST00000357783 PLEKHD1A6NEE1 506 aa22.39■■□□□ 1.17
PHTF1-201ENST00000357783 CROCC2H7BZ55 1655 aa22.37■■□□□ 1.17
PHTF1-201ENST00000357783 CDC42BPAQ5VT25 1732 aa22.37■■□□□ 1.17
PHTF1-201ENST00000357783 SLC4A1APQ9BWU0 796 aaKnown RBP22.37■■□□□ 1.17
PHTF1-201ENST00000357783 ANKRD30BQ9BXX2 1392 aa22.36■■□□□ 1.17
PHTF1-201ENST00000357783 L3MBTL2Q969R5 705 aa22.36■■□□□ 1.17
PHTF1-201ENST00000357783 NCOA1Q15788 1441 aa22.36■■□□□ 1.17
PHTF1-201ENST00000357783 ANP32CO43423 234 aa22.34■■□□□ 1.17
PHTF1-201ENST00000357783 CHD1O14646 1710 aa22.34■■□□□ 1.17
PHTF1-201ENST00000357783 ABCC10Q5T3U5 1492 aa22.33■■□□□ 1.16
PHTF1-201ENST00000357783 RPRD2Q5VT52 1461 aaKnown RBP22.32■■□□□ 1.16
PHTF1-201ENST00000357783 PTPRGP23470 1445 aa22.32■■□□□ 1.16
PHTF1-201ENST00000357783 ADGRL2O95490 1459 aa22.32■■□□□ 1.16
PHTF1-201ENST00000357783 HSPA5P11021 654 aaKnown RBP22.31■■□□□ 1.16
PHTF1-201ENST00000357783 MYT1Q01538 1121 aa22.31■■□□□ 1.16
PHTF1-201ENST00000357783 PZPP20742 1482 aa22.31■■□□□ 1.16
PHTF1-201ENST00000357783 ANKRD30AQ9BXX3 1397 aa22.29■■□□□ 1.16
PHTF1-201ENST00000357783 TEX14Q8IWB6 1497 aa22.27■■□□□ 1.16
PHTF1-201ENST00000357783 CCER2I3L3R5 266 aa22.26■■□□□ 1.15
PHTF1-201ENST00000357783 EIF4G2P78344 907 aaKnown RBP eCLIP22.26■■□□□ 1.15
PHTF1-201ENST00000357783 WASHC2AQ641Q2 1341 aa22.23■■□□□ 1.15
PHTF1-201ENST00000357783 ANKRD50Q9ULJ7 1429 aa22.23■■□□□ 1.15
PHTF1-201ENST00000357783 C9orf84Q5VXU9 1444 aa22.23■■□□□ 1.15
PHTF1-201ENST00000357783 NBPF8Q3BBV2 869 aa22.22■■□□□ 1.15
PHTF1-201ENST00000357783 SHANK2Q9UPX8 1470 aa22.21■■□□□ 1.15
PHTF1-201ENST00000357783 KIAA1107Q9UPP5 1409 aa22.2■■□□□ 1.14
PHTF1-201ENST00000357783 SUPT16HQ9Y5B9 1047 aaKnown RBP22.18■■□□□ 1.14
PHTF1-201ENST00000357783 SHROOM2Q13796 1616 aa22.18■■□□□ 1.14
PHTF1-201ENST00000357783 HNRNPMP52272 730 aaKnown RBP eCLIP22.18■■□□□ 1.14
PHTF1-201ENST00000357783 PKD2Q13563 968 aa22.18■■□□□ 1.14
PHTF1-201ENST00000357783 TSPY4P0CV99 314 aa22.17■■□□□ 1.14
PHTF1-201ENST00000357783 TSPY10P0CW01 314 aa22.17■■□□□ 1.14
PHTF1-201ENST00000357783 CDC42BPBQ9Y5S2 1711 aa22.15■■□□□ 1.14
PHTF1-201ENST00000357783 ERCC6L2Q5T890 1561 aa22.15■■□□□ 1.14
PHTF1-201ENST00000357783 PREX2Q70Z35 1606 aa22.14■■□□□ 1.14
PHTF1-201ENST00000357783 ARHGEF5Q12774 1597 aa22.14■■□□□ 1.13
PHTF1-201ENST00000357783 SAMD9LQ8IVG5 1584 aa22.14■■□□□ 1.13
PHTF1-201ENST00000357783 NUP155O75694 1391 aa22.13■■□□□ 1.13
PHTF1-201ENST00000357783 MBD5Q9P267 1494 aa22.12■■□□□ 1.13
PHTF1-201ENST00000357783 KIF15Q9NS87 1388 aa22.12■■□□□ 1.13
PHTF1-201ENST00000357783 C11orf95C9JLR9 678 aaPredicted RBP22.12■■□□□ 1.13
PHTF1-201ENST00000357783 CCDC7Q96M83 1385 aa22.09■■□□□ 1.13
PHTF1-201ENST00000357783 CNTLNQ9NXG0 1405 aa22.09■■□□□ 1.13
PHTF1-201ENST00000357783 CCDC141Q6ZP82 1450 aa22.09■■□□□ 1.13
PHTF1-201ENST00000357783 TTC37Q6PGP7 1564 aa22.09■■□□□ 1.13
PHTF1-201ENST00000357783 ZNF326Q5BKZ1 582 aaKnown RBP22.07■■□□□ 1.12
PHTF1-201ENST00000357783 ABCC2Q92887 1545 aa22.06■■□□□ 1.12
PHTF1-201ENST00000357783 SPATA31E1Q6ZUB1 1445 aa22.06■■□□□ 1.12
PHTF1-201ENST00000357783 KDM5DQ9BY66 1539 aa22.06■■□□□ 1.12
PHTF1-201ENST00000357783 ARHGAP5Q13017 1502 aa22.05■■□□□ 1.12
PHTF1-201ENST00000357783 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.05■■□□□ 1.12
PHTF1-201ENST00000357783 SYCP2Q9BX26 1530 aa22.04■■□□□ 1.12
PHTF1-201ENST00000357783 POLR1AO95602 1720 aaPredicted RBP22.02■■□□□ 1.12
PHTF1-201ENST00000357783 KIF7Q2M1P5 1343 aa22.01■■□□□ 1.11
PHTF1-201ENST00000357783 MYO5CQ9NQX4 1742 aa22■■□□□ 1.11
PHTF1-201ENST00000357783 RSPH4AQ5TD94 716 aa21.99■■□□□ 1.11
PHTF1-201ENST00000357783 CLASP1Q7Z460 1538 aa21.97■■□□□ 1.11
PHTF1-201ENST00000357783 USP47Q96K76 1375 aa21.97■■□□□ 1.11
PHTF1-201ENST00000357783 FAM135AQ9P2D6 1515 aa21.95■■□□□ 1.1
PHTF1-201ENST00000357783 ZCCHC11Q5TAX3 1644 aaKnown RBP21.95■■□□□ 1.1
PHTF1-201ENST00000357783 MAST1Q9Y2H9 1570 aa21.94■■□□□ 1.1
PHTF1-201ENST00000357783 HNRNPUQ00839 825 aaKnown RBP eCLIP21.93■■□□□ 1.1
PHTF1-201ENST00000357783 FKBP8Q14318 412 aa21.93■■□□□ 1.1
PHTF1-201ENST00000357783 PRKRIP1Q9H875 184 aaPredicted RBP21.93■■□□□ 1.1
PHTF1-201ENST00000357783 ARHGEF12Q9NZN5 1544 aa21.93■■□□□ 1.1
PHTF1-201ENST00000357783 BCORL1Q5H9F3 1711 aa21.92■■□□□ 1.1
PHTF1-201ENST00000357783 CCDC184Q52MB2 194 aa21.92■■□□□ 1.1
PHTF1-201ENST00000357783 UHRF1BP1Q6BDS2 1440 aa21.92■■□□□ 1.1
PHTF1-201ENST00000357783 KDM5CP41229 1560 aa21.92■■□□□ 1.1
PHTF1-201ENST00000357783 KDM2AQ9Y2K7 1162 aa21.91■■□□□ 1.1
PHTF1-201ENST00000357783 BCANQ96GW7 911 aa21.91■■□□□ 1.1
PHTF1-201ENST00000357783 RALGAPBQ86X10 1494 aa21.9■■□□□ 1.1
PHTF1-201ENST00000357783 PLEKHH2Q8IVE3 1493 aa21.9■■□□□ 1.1
PHTF1-201ENST00000357783 POLR3GLQ9BT43 218 aa21.89■■□□□ 1.1
PHTF1-201ENST00000357783 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.88■■□□□ 1.09
PHTF1-201ENST00000357783 UNC13BO14795 1591 aa21.88■■□□□ 1.09
PHTF1-201ENST00000357783 PLXNC1O60486 1568 aa21.88■■□□□ 1.09
PHTF1-201ENST00000357783 DCAF11Q8TEB1 546 aa21.87■■□□□ 1.09
PHTF1-201ENST00000357783 UHRF1BP1LA0JNW5 1464 aa21.87■■□□□ 1.09
PHTF1-201ENST00000357783 NEFLP07196 543 aa21.86■■□□□ 1.09
PHTF1-201ENST00000357783 CARD11Q9BXL7 1154 aa21.86■■□□□ 1.09
PHTF1-201ENST00000357783 PLCH2O75038 1416 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms