RNA–Protein interactions for RNA: ENST00000357058.7

RNF38-204, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-204ENST00000357058 KIF3BO15066 747 aa26.72■■□□□ 1.87
RNF38-204ENST00000357058 PEG3Q9GZU2 1588 aa26.71■■□□□ 1.87
RNF38-204ENST00000357058 FGD6Q6ZV73 1430 aa26.71■■□□□ 1.87
RNF38-204ENST00000357058 CCER2I3L3R5 266 aa26.7■■□□□ 1.86
RNF38-204ENST00000357058 SUPT16HQ9Y5B9 1047 aaKnown RBP26.7■■□□□ 1.86
RNF38-204ENST00000357058 DNMBPQ6XZF7 1577 aa26.69■■□□□ 1.86
RNF38-204ENST00000357058 ROCK2O75116 1388 aaKnown RBP26.68■■□□□ 1.86
RNF38-204ENST00000357058 MYOM3Q5VTT5 1437 aa26.68■■□□□ 1.86
RNF38-204ENST00000357058 C14orf37Q86TY3 774 aa26.66■■□□□ 1.86
RNF38-204ENST00000357058 IFT140Q96RY7 1462 aa26.65■■□□□ 1.86
RNF38-204ENST00000357058 PPM1GO15355 546 aaPredicted RBP26.63■■□□□ 1.85
RNF38-204ENST00000357058 TNNT2P45379 298 aaPredicted RBP26.62■■□□□ 1.85
RNF38-204ENST00000357058 TRHP20396 242 aaPredicted RBP26.62■■□□□ 1.85
RNF38-204ENST00000357058 FYCO1Q9BQS8 1478 aa26.61■■□□□ 1.85
RNF38-204ENST00000357058 PRDM2Q13029 1718 aa26.6■■□□□ 1.85
RNF38-204ENST00000357058 PLEKHG5O94827 1062 aa26.6■■□□□ 1.85
RNF38-204ENST00000357058 ZNF644Q9H582 1327 aaPredicted RBP26.59■■□□□ 1.85
RNF38-204ENST00000357058 ZBTB7CA1YPR0 619 aa26.59■■□□□ 1.85
RNF38-204ENST00000357058 NCOA2Q15596 1464 aa26.58■■□□□ 1.85
RNF38-204ENST00000357058 EFCAB5A4FU69 1503 aa26.57■■□□□ 1.84
RNF38-204ENST00000357058 OSCARQ8IYS5 282 aa26.56■■□□□ 1.84
RNF38-204ENST00000357058 DNAJC5BQ9UF47 199 aa26.56■■□□□ 1.84
RNF38-204ENST00000357058 SAFB2Q14151 953 aaKnown RBP eCLIP26.55■■□□□ 1.84
RNF38-204ENST00000357058 NEUROD2Q15784 382 aa26.55■■□□□ 1.84
RNF38-204ENST00000357058 UPF2Q9HAU5 1272 aaKnown RBP26.53■■□□□ 1.84
RNF38-204ENST00000357058 LAMC3Q9Y6N6 1575 aa26.52■■□□□ 1.84
RNF38-204ENST00000357058 SRPK2P78362 688 aaKnown RBP26.52■■□□□ 1.84
RNF38-204ENST00000357058 ABCA10Q8WWZ4 1543 aa26.51■■□□□ 1.83
RNF38-204ENST00000357058 HDGFP51858 240 aaKnown RBP26.51■■□□□ 1.83
RNF38-204ENST00000357058 NUDCQ9Y266 331 aa26.51■■□□□ 1.83
RNF38-204ENST00000357058 STK26Q9P289 416 aa26.5■■□□□ 1.83
RNF38-204ENST00000357058 RRBP1Q9P2E9 1410 aaKnown RBP26.5■■□□□ 1.83
RNF38-204ENST00000357058 KTN1Q86UP2 1357 aaKnown RBP26.48■■□□□ 1.83
RNF38-204ENST00000357058 WASHC2CQ9Y4E1 1318 aa26.48■■□□□ 1.83
RNF38-204ENST00000357058 SNAPC4Q5SXM2 1469 aa26.48■■□□□ 1.83
RNF38-204ENST00000357058 MAPK8IP3Q9UPT6 1336 aa26.47■■□□□ 1.83
RNF38-204ENST00000357058 CCDC144AA2RUR9 1427 aa26.47■■□□□ 1.83
RNF38-204ENST00000357058 MORC1Q86VD1 984 aa26.43■■□□□ 1.82
RNF38-204ENST00000357058 PRG4Q92954 1404 aaPredicted RBP26.42■■□□□ 1.82
RNF38-204ENST00000357058 U2SURPO15042 1029 aaKnown RBP26.42■■□□□ 1.82
RNF38-204ENST00000357058 CYB5RLQ6IPT4 315 aa26.42■■□□□ 1.82
RNF38-204ENST00000357058 UACAQ9BZF9 1416 aa26.41■■□□□ 1.82
RNF38-204ENST00000357058 EIF3AQ14152 1382 aaKnown RBP26.39■■□□□ 1.81
RNF38-204ENST00000357058 RALBP1Q15311 655 aa26.38■■□□□ 1.81
RNF38-204ENST00000357058 TIAM1Q13009 1591 aa26.38■■□□□ 1.81
RNF38-204ENST00000357058 MYH16Q9H6N6 1097 aa26.37■■□□□ 1.81
RNF38-204ENST00000357058 PPP4R2Q9NY27 417 aa26.37■■□□□ 1.81
RNF38-204ENST00000357058 KIF15Q9NS87 1388 aa26.37■■□□□ 1.81
RNF38-204ENST00000357058 NUTM2DQ5VT03 806 aaPredicted RBP26.35■■□□□ 1.81
RNF38-204ENST00000357058 LAS1LQ9Y4W2 734 aaKnown RBP26.34■■□□□ 1.81
RNF38-204ENST00000357058 EHBP1L1Q8N3D4 1523 aa26.34■■□□□ 1.81
RNF38-204ENST00000357058 ST20-MTHFSA0A0A6YYL1 179 aa26.34■■□□□ 1.81
RNF38-204ENST00000357058 SYNJ2O15056 1496 aa26.34■■□□□ 1.81
RNF38-204ENST00000357058 HSP90AA1P07900 732 aaKnown RBP26.34■■□□□ 1.81
RNF38-204ENST00000357058 BIVM-ERCC5R4GMW8 1640 aa26.31■■□□□ 1.8
RNF38-204ENST00000357058 ANKRD50Q9ULJ7 1429 aa26.3■■□□□ 1.8
RNF38-204ENST00000357058 LMOD2Q6P5Q4 547 aa26.29■■□□□ 1.8
RNF38-204ENST00000357058 FTSJ3Q8IY81 847 aaKnown RBP26.29■■□□□ 1.8
RNF38-204ENST00000357058 HECW1Q76N89 1606 aa26.28■■□□□ 1.8
RNF38-204ENST00000357058 URB2Q14146 1524 aaKnown RBP26.28■■□□□ 1.8
RNF38-204ENST00000357058 HDGFL2Q7Z4V5 671 aaPredicted RBP26.28■■□□□ 1.8
RNF38-204ENST00000357058 FRAT1Q92837 279 aaPredicted RBP26.27■■□□□ 1.8
RNF38-204ENST00000357058 CUL7Q14999 1698 aa26.27■■□□□ 1.8
RNF38-204ENST00000357058 KIAA0586Q9BVV6 1533 aa26.26■■□□□ 1.79
RNF38-204ENST00000357058 USP47Q96K76 1375 aa26.26■■□□□ 1.79
RNF38-204ENST00000357058 PNNQ9H307 717 aaKnown RBP26.25■■□□□ 1.79
RNF38-204ENST00000357058 HAP1P54257 671 aaPredicted RBP26.23■■□□□ 1.79
RNF38-204ENST00000357058 B4GALNT3Q6L9W6 998 aa26.23■■□□□ 1.79
RNF38-204ENST00000357058 ARHGAP5Q13017 1502 aa26.22■■□□□ 1.79
RNF38-204ENST00000357058 TROQ12816 1431 aaPredicted RBP26.22■■□□□ 1.79
RNF38-204ENST00000357058 SOX12O15370 315 aa26.22■■□□□ 1.79
RNF38-204ENST00000357058 MIA2Q96PC5 1412 aa26.22■■□□□ 1.79
RNF38-204ENST00000357058 TRAK1Q9UPV9 953 aa26.21■■□□□ 1.79
RNF38-204ENST00000357058 IQGAP2Q13576 1575 aa26.21■■□□□ 1.79
RNF38-204ENST00000357058 PCF11O94913 1555 aaKnown RBP26.19■■□□□ 1.78
RNF38-204ENST00000357058 A0A0G2JS52 829 aa26.18■■□□□ 1.78
RNF38-204ENST00000357058 NLRP13Q86W25 1043 aa26.17■■□□□ 1.78
RNF38-204ENST00000357058 CDK13Q14004 1512 aaKnown RBP26.16■■□□□ 1.78
RNF38-204ENST00000357058 EPRSP07814 1512 aaKnown RBP26.16■■□□□ 1.78
RNF38-204ENST00000357058 AFAP1Q8N556 730 aa26.14■■□□□ 1.78
RNF38-204ENST00000357058 PANK3Q9H999 370 aa26.14■■□□□ 1.77
RNF38-204ENST00000357058 SUPT6HQ7KZ85 1726 aaKnown RBP26.13■■□□□ 1.77
RNF38-204ENST00000357058 HFM1A2PYH4 1435 aa26.12■■□□□ 1.77
RNF38-204ENST00000357058 PRKRIP1Q9H875 184 aaPredicted RBP26.12■■□□□ 1.77
RNF38-204ENST00000357058 U2AF1L5P0DN76 240 aaPredicted RBP26.12■■□□□ 1.77
RNF38-204ENST00000357058 U2AF1Q01081 240 aaKnown RBP eCLIP26.12■■□□□ 1.77
RNF38-204ENST00000357058 FAM69CQ0P6D2 419 aa26.11■■□□□ 1.77
RNF38-204ENST00000357058 NBR1Q14596 966 aa26.11■■□□□ 1.77
RNF38-204ENST00000357058 TERF2IPQ9NYB0 399 aa26.1■■□□□ 1.77
RNF38-204ENST00000357058 VGFO15240 615 aaPredicted RBP26.1■■□□□ 1.77
RNF38-204ENST00000357058 MYBBP1AQ9BQG0 1328 aaKnown RBP26.08■■□□□ 1.77
RNF38-204ENST00000357058 C9orf84Q5VXU9 1444 aa26.08■■□□□ 1.77
RNF38-204ENST00000357058 GRIN2AQ12879 1464 aa26.07■■□□□ 1.76
RNF38-204ENST00000357058 MS4A1P11836 297 aa26.07■■□□□ 1.76
RNF38-204ENST00000357058 RGS3P49796 1198 aa26.07■■□□□ 1.76
RNF38-204ENST00000357058 EID1Q9Y6B2 187 aa26.07■■□□□ 1.76
RNF38-204ENST00000357058 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.06■■□□□ 1.76
RNF38-204ENST00000357058 RCAN3Q9UKA8 241 aa26.06■■□□□ 1.76
RNF38-204ENST00000357058 DAPK1P53355 1430 aa26.05■■□□□ 1.76
RNF38-204ENST00000357058 ZNF608Q9ULD9 1512 aaPredicted RBP26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms