RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 CFAP44Q96MT7 982 aa14.53□□□□□ -0.08
FN1-204ENST00000356005 UACAQ9BZF9 1416 aa14.53□□□□□ -0.08
FN1-204ENST00000356005 STK26Q9P289 416 aa14.52□□□□□ -0.08
FN1-204ENST00000356005 DDRGK1Q96HY6 314 aa14.52□□□□□ -0.09
FN1-204ENST00000356005 ATAD2BQ9ULI0 1458 aa14.52□□□□□ -0.09
FN1-204ENST00000356005 MORC1Q86VD1 984 aa14.51□□□□□ -0.09
FN1-204ENST00000356005 FGD1P98174 961 aa14.5□□□□□ -0.09
FN1-204ENST00000356005 TNNT2P45379 298 aaPredicted RBP14.5□□□□□ -0.09
FN1-204ENST00000356005 TIMELESSQ9UNS1 1208 aa14.5□□□□□ -0.09
FN1-204ENST00000356005 KIF3BO15066 747 aa14.49□□□□□ -0.09
FN1-204ENST00000356005 CYB5RLQ6IPT4 315 aa14.49□□□□□ -0.09
FN1-204ENST00000356005 HDAC5Q9UQL6 1122 aa14.49□□□□□ -0.09
FN1-204ENST00000356005 SOX12O15370 315 aa14.49□□□□□ -0.09
FN1-204ENST00000356005 KCNJ4P48050 445 aa14.48□□□□□ -0.09
FN1-204ENST00000356005 TERF2IPQ9NYB0 399 aa14.48□□□□□ -0.09
FN1-204ENST00000356005 SETD5Q9C0A6 1442 aa14.47□□□□□ -0.09
FN1-204ENST00000356005 NEUROD2Q15784 382 aa14.47□□□□□ -0.09
FN1-204ENST00000356005 VPS8Q8N3P4 1428 aa14.47□□□□□ -0.09
FN1-204ENST00000356005 NUP155O75694 1391 aa14.47□□□□□ -0.09
FN1-204ENST00000356005 ROCK2O75116 1388 aaKnown RBP14.46□□□□□ -0.09
FN1-204ENST00000356005 HIRIP3Q9BW71 556 aaPredicted RBP14.46□□□□□ -0.09
FN1-204ENST00000356005 SAFB2Q14151 953 aaKnown RBP eCLIP14.46□□□□□ -0.1
FN1-204ENST00000356005 NGDNQ8NEJ9 315 aaKnown RBP14.45□□□□□ -0.1
FN1-204ENST00000356005 CC2D1BQ5T0F9 858 aaKnown RBP14.45□□□□□ -0.1
FN1-204ENST00000356005 PTPRGP23470 1445 aa14.44□□□□□ -0.1
FN1-204ENST00000356005 GAPVD1Q14C86 1478 aa14.44□□□□□ -0.1
FN1-204ENST00000356005 G3V3G9 751 aa14.43□□□□□ -0.1
FN1-204ENST00000356005 DCAF8Q5TAQ9 597 aa14.43□□□□□ -0.1
FN1-204ENST00000356005 PKD2Q13563 968 aa14.43□□□□□ -0.1
FN1-204ENST00000356005 IPO8O15397 1037 aaKnown RBP14.41□□□□□ -0.1
FN1-204ENST00000356005 MEX3CQ5U5Q3 659 aaKnown RBP14.41□□□□□ -0.1
FN1-204ENST00000356005 MCCP23508 829 aa14.41□□□□□ -0.1
FN1-204ENST00000356005 TULP1O00294 542 aaPredicted RBP14.4□□□□□ -0.1
FN1-204ENST00000356005 EVA1CP58658 441 aa14.4□□□□□ -0.1
FN1-204ENST00000356005 KTN1Q86UP2 1357 aaKnown RBP14.39□□□□□ -0.11
FN1-204ENST00000356005 DCAF8L1A6NGE4 600 aa14.39□□□□□ -0.11
FN1-204ENST00000356005 HNRNPMP52272 730 aaKnown RBP eCLIP14.37□□□□□ -0.11
FN1-204ENST00000356005 FRAT1Q92837 279 aaPredicted RBP14.37□□□□□ -0.11
FN1-204ENST00000356005 CC2D2AQ9P2K1 1620 aa14.37□□□□□ -0.11
FN1-204ENST00000356005 ISY1Q9ULR0 285 aaKnown RBP14.36□□□□□ -0.11
FN1-204ENST00000356005 AMPHP49418 695 aa14.36□□□□□ -0.11
FN1-204ENST00000356005 LMOD3Q0VAK6 560 aa14.36□□□□□ -0.11
FN1-204ENST00000356005 GOLGA6L6A8MZA4 724 aa14.36□□□□□ -0.11
FN1-204ENST00000356005 GPATCH3Q96I76 525 aa14.36□□□□□ -0.11
FN1-204ENST00000356005 TAF7LQ5H9L4 462 aa14.36□□□□□ -0.11
FN1-204ENST00000356005 NAP1L2Q9ULW6 460 aaPredicted RBP14.36□□□□□ -0.11
FN1-204ENST00000356005 VGFO15240 615 aaPredicted RBP14.34□□□□□ -0.11
FN1-204ENST00000356005 FAM69CQ0P6D2 419 aa14.34□□□□□ -0.11
FN1-204ENST00000356005 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.34□□□□□ -0.11
FN1-204ENST00000356005 CUX1P39880 1505 aa14.33□□□□□ -0.12
FN1-204ENST00000356005 ZNF330Q9Y3S2 320 aaPredicted RBP14.33□□□□□ -0.12
FN1-204ENST00000356005 STK31Q9BXU1 1019 aa14.33□□□□□ -0.12
FN1-204ENST00000356005 FOXD1Q16676 465 aa14.32□□□□□ -0.12
FN1-204ENST00000356005 KIAA1211Q6ZU35 1233 aa14.32□□□□□ -0.12
FN1-204ENST00000356005 MPHOSPH9Q99550 1183 aa14.32□□□□□ -0.12
FN1-204ENST00000356005 NRDCO43847 1150 aa14.32□□□□□ -0.12
FN1-204ENST00000356005 GTF2E1P29083 439 aaPredicted RBP14.32□□□□□ -0.12
FN1-204ENST00000356005 CCDC144AA2RUR9 1427 aa14.31□□□□□ -0.12
FN1-204ENST00000356005 TRIM44Q96DX7 344 aaPredicted RBP14.31□□□□□ -0.12
FN1-204ENST00000356005 GORABQ5T7V8 394 aa14.3□□□□□ -0.12
FN1-204ENST00000356005 FHOD3Q2V2M9 1422 aa14.3□□□□□ -0.12
FN1-204ENST00000356005 FGD5Q6ZNL6 1462 aa14.29□□□□□ -0.12
FN1-204ENST00000356005 RALBP1Q15311 655 aa14.29□□□□□ -0.12
FN1-204ENST00000356005 ATF3P18847 181 aa14.29□□□□□ -0.12
FN1-204ENST00000356005 GNL2Q13823 731 aaKnown RBP14.28□□□□□ -0.12
FN1-204ENST00000356005 U2AF1L5P0DN76 240 aaPredicted RBP14.28□□□□□ -0.12
FN1-204ENST00000356005 U2AF1Q01081 240 aaKnown RBP eCLIP14.28□□□□□ -0.122e-9■■□□□ 12.6
FN1-204ENST00000356005 SIN3AQ96ST3 1273 aa14.28□□□□□ -0.12
FN1-204ENST00000356005 C1orf141Q5JVX7 400 aa14.27□□□□□ -0.13
FN1-204ENST00000356005 MRC2Q9UBG0 1479 aa14.26□□□□□ -0.13
FN1-204ENST00000356005 GRIN2BQ13224 1484 aa14.26□□□□□ -0.13
FN1-204ENST00000356005 HSP90AB1P08238 724 aaKnown RBP14.26□□□□□ -0.13
FN1-204ENST00000356005 GOLGA6L4A6NEF3 574 aa14.26□□□□□ -0.13
FN1-204ENST00000356005 CLSTN1O94985 981 aa14.26□□□□□ -0.13
FN1-204ENST00000356005 EVC2Q86UK5 1308 aa14.26□□□□□ -0.13
FN1-204ENST00000356005 CHMP3Q9Y3E7 222 aa14.25□□□□□ -0.13
FN1-204ENST00000356005 PSME1Q06323 249 aa14.24□□□□□ -0.13
FN1-204ENST00000356005 ARHGAP5Q13017 1502 aa14.24□□□□□ -0.13
FN1-204ENST00000356005 WASHC2AQ641Q2 1341 aa14.24□□□□□ -0.13
FN1-204ENST00000356005 L1TD1Q5T7N2 865 aaKnown RBP14.23□□□□□ -0.13
FN1-204ENST00000356005 PTMAP06454 111 aaKnown RBP14.22□□□□□ -0.13
FN1-204ENST00000356005 MIER1Q8N108 512 aa14.22□□□□□ -0.13
FN1-204ENST00000356005 HMMRO75330 724 aa14.22□□□□□ -0.13
FN1-204ENST00000356005 CCDC34Q96HJ3 373 aa14.22□□□□□ -0.13
FN1-204ENST00000356005 SYNJ2O15056 1496 aa14.22□□□□□ -0.13
FN1-204ENST00000356005 TAOK2Q9UL54 1235 aa14.22□□□□□ -0.13
FN1-204ENST00000356005 PHLDB1Q86UU1 1377 aa14.22□□□□□ -0.13
FN1-204ENST00000356005 FRAT2O75474 233 aaPredicted RBP14.21□□□□□ -0.13
FN1-204ENST00000356005 COG3Q96JB2 828 aa14.21□□□□□ -0.13
FN1-204ENST00000356005 NCAPD3P42695 1498 aa14.21□□□□□ -0.13
FN1-204ENST00000356005 PHF23Q9BUL5 403 aaPredicted RBP14.21□□□□□ -0.13
FN1-204ENST00000356005 IRX6P78412 446 aaPredicted RBP14.21□□□□□ -0.14
FN1-204ENST00000356005 ANO8Q9HCE9 1232 aaPredicted RBP14.2□□□□□ -0.14
FN1-204ENST00000356005 IFT140Q96RY7 1462 aa14.2□□□□□ -0.14
FN1-204ENST00000356005 HMGB2P26583 209 aaKnown RBP14.19□□□□□ -0.14
FN1-204ENST00000356005 KIF21BO75037 1637 aa14.19□□□□□ -0.14
FN1-204ENST00000356005 UNC13AQ9UPW8 1703 aa14.19□□□□□ -0.14
FN1-204ENST00000356005 LRRFIP1Q32MZ4 808 aaKnown RBP14.19□□□□□ -0.14
FN1-204ENST00000356005 MSH5O43196 834 aa14.19□□□□□ -0.14
FN1-204ENST00000356005 STAC3Q96MF2 364 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms