RNA–Protein interactions for RNA: ENST00000355123.8

ITSN2-201, Transcript of intersectin 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ITSN2, Length 6,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-201ENST00000355123 HSPA5P11021 654 aaKnown RBP21.52■■□□□ 1.04
ITSN2-201ENST00000355123 CCNB3Q8WWL7 1395 aa21.51■■□□□ 1.03
ITSN2-201ENST00000355123 CEP164Q9UPV0 1460 aa21.5■■□□□ 1.03
ITSN2-201ENST00000355123 TNIKQ9UKE5 1360 aa21.49■■□□□ 1.03
ITSN2-201ENST00000355123 MS4A1P11836 297 aa21.49■■□□□ 1.03
ITSN2-201ENST00000355123 EEA1Q15075 1411 aa21.48■■□□□ 1.03
ITSN2-201ENST00000355123 BAZ1BQ9UIG0 1483 aaKnown RBP21.47■■□□□ 1.03
ITSN2-201ENST00000355123 CHMP4BQ9H444 224 aaKnown RBP21.47■■□□□ 1.03
ITSN2-201ENST00000355123 PNNQ9H307 717 aaKnown RBP21.46■■□□□ 1.03
ITSN2-201ENST00000355123 ZNF330Q9Y3S2 320 aaPredicted RBP21.46■■□□□ 1.03
ITSN2-201ENST00000355123 MCCP23508 829 aa21.45■■□□□ 1.03
ITSN2-201ENST00000355123 TNNT3P45378 269 aaPredicted RBP21.45■■□□□ 1.02
ITSN2-201ENST00000355123 ANO8Q9HCE9 1232 aaPredicted RBP21.45■■□□□ 1.02
ITSN2-201ENST00000355123 FOXD4L1Q9NU39 408 aa21.45■■□□□ 1.02
ITSN2-201ENST00000355123 GNL2Q13823 731 aaKnown RBP21.43■■□□□ 1.02
ITSN2-201ENST00000355123 NOC3LQ8WTT2 800 aaKnown RBP21.43■■□□□ 1.02
ITSN2-201ENST00000355123 ITPRIPQ8IWB1 547 aa21.43■■□□□ 1.02
ITSN2-201ENST00000355123 RTF1Q92541 710 aaKnown RBP21.43■■□□□ 1.02
ITSN2-201ENST00000355123 PAK3O75914 559 aaPredicted RBP21.41■■□□□ 1.02
ITSN2-201ENST00000355123 ERCC6Q03468 1493 aa21.41■■□□□ 1.02
ITSN2-201ENST00000355123 GGT6Q6P531 493 aa21.39■■□□□ 1.01
ITSN2-201ENST00000355123 KANK1Q14678 1352 aa21.38■■□□□ 1.01
ITSN2-201ENST00000355123 TRHP20396 242 aaPredicted RBP21.37■■□□□ 1.01
ITSN2-201ENST00000355123 NOL8Q76FK4 1167 aaKnown RBP21.36■■□□□ 1.01
ITSN2-201ENST00000355123 RB1CC1Q8TDY2 1594 aa21.35■■□□□ 1.01
ITSN2-201ENST00000355123 KTN1Q86UP2 1357 aaKnown RBP21.35■■□□□ 1.01
ITSN2-201ENST00000355123 KIAA2012Q0VF49 1180 aa21.35■■□□□ 1.01
ITSN2-201ENST00000355123 MFAP1P55081 439 aaKnown RBP21.35■■□□□ 1.01
ITSN2-201ENST00000355123 PKD2Q13563 968 aa21.35■■□□□ 1.01
ITSN2-201ENST00000355123 U2AF1L5P0DN76 240 aaPredicted RBP21.34■■□□□ 1.01
ITSN2-201ENST00000355123 U2AF1Q01081 240 aaKnown RBP eCLIP21.34■■□□□ 1.01
ITSN2-201ENST00000355123 CCDC146Q8IYE0 955 aa21.34■■□□□ 1.01
ITSN2-201ENST00000355123 HSP90B1P14625 803 aaKnown RBP21.34■■□□□ 1.01
ITSN2-201ENST00000355123 RCAN3Q9UKA8 241 aa21.33■■□□□ 1.01
ITSN2-201ENST00000355123 FOXD4L5Q5VV16 416 aaPredicted RBP21.33■■□□□ 1
ITSN2-201ENST00000355123 FOXD4L4Q8WXT5 416 aaPredicted RBP21.33■■□□□ 1
ITSN2-201ENST00000355123 KIAA1211Q6ZU35 1233 aa21.32■■□□□ 1
ITSN2-201ENST00000355123 NUTM2DQ5VT03 806 aaPredicted RBP21.32■■□□□ 1
ITSN2-201ENST00000355123 CREBRFQ8IUR6 639 aa21.32■■□□□ 1
ITSN2-201ENST00000355123 SOGA1O94964 1423 aa21.31■■□□□ 1
ITSN2-201ENST00000355123 ROCK2O75116 1388 aaKnown RBP21.31■■□□□ 1
ITSN2-201ENST00000355123 PRM3Q9NNZ6 103 aa21.3■■□□□ 1
ITSN2-201ENST00000355123 SETD5Q9C0A6 1442 aa21.29■■□□□ 1
ITSN2-201ENST00000355123 KANK4Q5T7N3 995 aaPredicted RBP21.29■■□□□ 1
ITSN2-201ENST00000355123 CHMP3Q9Y3E7 222 aa21.28■■□□□ 1
ITSN2-201ENST00000355123 CCER2I3L3R5 266 aa21.28■■□□□ 1
ITSN2-201ENST00000355123 GBP4Q96PP9 640 aa21.28■■□□□ 1
ITSN2-201ENST00000355123 HDGFL2Q7Z4V5 671 aaPredicted RBP21.28■■□□□ 1
ITSN2-201ENST00000355123 GOLGA6L3A6NEY3 463 aa21.28■■□□□ 1
ITSN2-201ENST00000355123 CSB-PGBD3P0DP91 1061 aa21.27■■□□□ 1
ITSN2-201ENST00000355123 A0A0U1RQG5 324 aaPredicted RBP21.27■■□□□ 1
ITSN2-201ENST00000355123 CLUAP1Q96AJ1 413 aa21.26■□□□□ 0.99
ITSN2-201ENST00000355123 TRIM6-TRIM34B2RNG4 842 aa21.25■□□□□ 0.99
ITSN2-201ENST00000355123 ARHGAP35Q9NRY4 1499 aa21.25■□□□□ 0.99
ITSN2-201ENST00000355123 CUX2O14529 1486 aa21.24■□□□□ 0.99
ITSN2-201ENST00000355123 IPO8O15397 1037 aaKnown RBP21.24■□□□□ 0.99
ITSN2-201ENST00000355123 SLC4A10Q6U841 1118 aa21.22■□□□□ 0.99
ITSN2-201ENST00000355123 RWDD1Q9H446 243 aaPredicted RBP21.22■□□□□ 0.99
ITSN2-201ENST00000355123 CARMIL1Q5VZK9 1371 aa21.22■□□□□ 0.99
ITSN2-201ENST00000355123 FHAD1B1AJZ9 1412 aa21.22■□□□□ 0.99
ITSN2-201ENST00000355123 TSHZ2Q9NRE2 1034 aa21.22■□□□□ 0.99
ITSN2-201ENST00000355123 SMC4Q9NTJ3 1288 aa21.21■□□□□ 0.99
ITSN2-201ENST00000355123 PATL2C9JE40 543 aaKnown RBP21.18■□□□□ 0.98
ITSN2-201ENST00000355123 SLC4A3P48751 1232 aa21.17■□□□□ 0.98
ITSN2-201ENST00000355123 HDGFP51858 240 aaKnown RBP21.17■□□□□ 0.98
ITSN2-201ENST00000355123 GOLGA6L1Q8N7Z2 621 aa21.17■□□□□ 0.98
ITSN2-201ENST00000355123 CCDC9Q9Y3X0 531 aaKnown RBP21.17■□□□□ 0.98
ITSN2-201ENST00000355123 MPHOSPH9Q99550 1183 aa21.17■□□□□ 0.98
ITSN2-201ENST00000355123 GORABQ5T7V8 394 aa21.17■□□□□ 0.98
ITSN2-201ENST00000355123 VSIG10Q8N0Z9 540 aa21.16■□□□□ 0.98
ITSN2-201ENST00000355123 NUTM2FA1L443 756 aa21.16■□□□□ 0.98
ITSN2-201ENST00000355123 RAB3GAP2Q9H2M9 1393 aa21.16■□□□□ 0.98
ITSN2-201ENST00000355123 FBXO3Q9UK99 471 aa21.15■□□□□ 0.98
ITSN2-201ENST00000355123 FOXD4L6Q3SYB3 417 aaPredicted RBP21.15■□□□□ 0.98
ITSN2-201ENST00000355123 FOXD4L3Q6VB84 417 aaPredicted RBP21.15■□□□□ 0.98
ITSN2-201ENST00000355123 ABCC8Q09428 1581 aa21.15■□□□□ 0.98
ITSN2-201ENST00000355123 HSP90AA2PQ14568 343 aaPredicted RBP21.14■□□□□ 0.98
ITSN2-201ENST00000355123 LTV1Q96GA3 475 aaPredicted RBP21.14■□□□□ 0.98
ITSN2-201ENST00000355123 RRP7AQ9Y3A4 280 aaKnown RBP21.14■□□□□ 0.98
ITSN2-201ENST00000355123 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.13■□□□□ 0.97
ITSN2-201ENST00000355123 NUP155O75694 1391 aa21.12■□□□□ 0.97
ITSN2-201ENST00000355123 TAF7LQ5H9L4 462 aa21.12■□□□□ 0.97
ITSN2-201ENST00000355123 TCERG1O14776 1098 aaKnown RBP21.12■□□□□ 0.97
ITSN2-201ENST00000355123 PMFBP1Q8TBY8 1022 aa21.11■□□□□ 0.97
ITSN2-201ENST00000355123 IPO9Q96P70 1041 aaKnown RBP21.11■□□□□ 0.97
ITSN2-201ENST00000355123 CFAP44Q96MT7 982 aa21.11■□□□□ 0.97
ITSN2-201ENST00000355123 STK31Q9BXU1 1019 aa21.11■□□□□ 0.97
ITSN2-201ENST00000355123 TIMELESSQ9UNS1 1208 aa21.11■□□□□ 0.97
ITSN2-201ENST00000355123 TPM4P67936 248 aa21.1■□□□□ 0.97
ITSN2-201ENST00000355123 RALBP1Q15311 655 aa21.1■□□□□ 0.97
ITSN2-201ENST00000355123 SYAP1Q96A49 352 aaPredicted RBP21.1■□□□□ 0.97
ITSN2-201ENST00000355123 CALD1Q05682 793 aaKnown RBP21.09■□□□□ 0.97
ITSN2-201ENST00000355123 CCAR2Q8N163 923 aaKnown RBP21.08■□□□□ 0.96
ITSN2-201ENST00000355123 SPAG9O60271 1321 aaKnown RBP21.07■□□□□ 0.96
ITSN2-201ENST00000355123 PTMSP20962 102 aa21.07■□□□□ 0.96
ITSN2-201ENST00000355123 RASSF8Q8NHQ8 419 aa21.07■□□□□ 0.96
ITSN2-201ENST00000355123 BCL11BQ9C0K0 894 aaPredicted RBP21.07■□□□□ 0.96
ITSN2-201ENST00000355123 HNRNPMP52272 730 aaKnown RBP eCLIP21.07■□□□□ 0.96
ITSN2-201ENST00000355123 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.06■□□□□ 0.96
ITSN2-201ENST00000355123 PLIN1O60240 522 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms