RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 JPH4Q96JJ6 628 aa30.98■■■□□ 2.55
LIMS2-202ENST00000355119 ITSN2Q9NZM3 1697 aa30.98■■■□□ 2.55
LIMS2-202ENST00000355119 KDM5BQ9UGL1 1544 aa30.97■■■□□ 2.55
LIMS2-202ENST00000355119 DDX10Q13206 875 aaKnown RBP30.96■■■□□ 2.55
LIMS2-202ENST00000355119 PRG4Q92954 1404 aaPredicted RBP30.95■■■□□ 2.55
LIMS2-202ENST00000355119 MPHOSPH9Q99550 1183 aa30.91■■■□□ 2.54
LIMS2-202ENST00000355119 CAMSAP2Q08AD1 1489 aa30.88■■■□□ 2.53
LIMS2-202ENST00000355119 ZNF644Q9H582 1327 aaPredicted RBP30.88■■■□□ 2.53
LIMS2-202ENST00000355119 ABCA8O94911 1581 aa30.87■■■□□ 2.53
LIMS2-202ENST00000355119 GPATCH8Q9UKJ3 1502 aaKnown RBP30.86■■■□□ 2.53
LIMS2-202ENST00000355119 KIF14Q15058 1648 aa30.85■■■□□ 2.53
LIMS2-202ENST00000355119 CFDP1Q9UEE9 299 aaPredicted RBP30.84■■■□□ 2.53
LIMS2-202ENST00000355119 ADGBQ8N7X0 1667 aa30.83■■■□□ 2.53
LIMS2-202ENST00000355119 HIRIP3Q9BW71 556 aaPredicted RBP30.83■■■□□ 2.53
LIMS2-202ENST00000355119 CROCC2H7BZ55 1655 aa30.77■■■□□ 2.52
LIMS2-202ENST00000355119 ADGRL2O95490 1459 aa30.77■■■□□ 2.52
LIMS2-202ENST00000355119 ANKRD30BQ9BXX2 1392 aa30.74■■■□□ 2.51
LIMS2-202ENST00000355119 PLEKHD1A6NEE1 506 aa30.74■■■□□ 2.51
LIMS2-202ENST00000355119 CCER2I3L3R5 266 aa30.74■■■□□ 2.51
LIMS2-202ENST00000355119 ATP10BO94823 1461 aa30.73■■■□□ 2.51
LIMS2-202ENST00000355119 ANP32CO43423 234 aa30.73■■■□□ 2.51
LIMS2-202ENST00000355119 NCOA1Q15788 1441 aa30.72■■■□□ 2.51
LIMS2-202ENST00000355119 KCNH8Q96L42 1107 aa30.72■■■□□ 2.51
LIMS2-202ENST00000355119 RPRD2Q5VT52 1461 aaKnown RBP30.71■■■□□ 2.51
LIMS2-202ENST00000355119 ABCC10Q5T3U5 1492 aa30.7■■■□□ 2.51
LIMS2-202ENST00000355119 CDC42BPAQ5VT25 1732 aa30.68■■■□□ 2.5
LIMS2-202ENST00000355119 SLC4A1APQ9BWU0 796 aaKnown RBP30.67■■■□□ 2.5
LIMS2-202ENST00000355119 FOXD1Q16676 465 aa30.66■■■□□ 2.5
LIMS2-202ENST00000355119 L3MBTL2Q969R5 705 aa30.66■■■□□ 2.5
LIMS2-202ENST00000355119 ANKRD30AQ9BXX3 1397 aa30.66■■■□□ 2.5
LIMS2-202ENST00000355119 ZNF777Q9ULD5 760 aaPredicted RBP30.66■■■□□ 2.5
LIMS2-202ENST00000355119 PZPP20742 1482 aa30.65■■■□□ 2.5
LIMS2-202ENST00000355119 SHANK2Q9UPX8 1470 aa30.63■■■□□ 2.49
LIMS2-202ENST00000355119 PTPRGP23470 1445 aa30.62■■■□□ 2.49
LIMS2-202ENST00000355119 HSPA5P11021 654 aaKnown RBP30.62■■■□□ 2.49
LIMS2-202ENST00000355119 TEX14Q8IWB6 1497 aa30.61■■■□□ 2.49
LIMS2-202ENST00000355119 EIF4G2P78344 907 aaKnown RBP eCLIP30.61■■■□□ 2.49
LIMS2-202ENST00000355119 CHD1O14646 1710 aa30.58■■■□□ 2.49
LIMS2-202ENST00000355119 KIAA1107Q9UPP5 1409 aa30.53■■■□□ 2.48
LIMS2-202ENST00000355119 SHROOM2Q13796 1616 aa30.53■■■□□ 2.48
LIMS2-202ENST00000355119 C9orf84Q5VXU9 1444 aa30.52■■■□□ 2.48
LIMS2-202ENST00000355119 ANKRD50Q9ULJ7 1429 aa30.52■■■□□ 2.48
LIMS2-202ENST00000355119 ARHGEF5Q12774 1597 aa30.52■■■□□ 2.48
LIMS2-202ENST00000355119 WASHC2AQ641Q2 1341 aa30.5■■■□□ 2.47
LIMS2-202ENST00000355119 SUPT16HQ9Y5B9 1047 aaKnown RBP30.47■■■□□ 2.47
LIMS2-202ENST00000355119 NBPF8Q3BBV2 869 aa30.46■■■□□ 2.47
LIMS2-202ENST00000355119 TSPY4P0CV99 314 aa30.44■■■□□ 2.46
LIMS2-202ENST00000355119 TSPY10P0CW01 314 aa30.44■■■□□ 2.46
LIMS2-202ENST00000355119 PREX2Q70Z35 1606 aa30.44■■■□□ 2.46
LIMS2-202ENST00000355119 KDM5DQ9BY66 1539 aa30.43■■■□□ 2.46
LIMS2-202ENST00000355119 MBD5Q9P267 1494 aa30.41■■■□□ 2.46
LIMS2-202ENST00000355119 PKD2Q13563 968 aa30.4■■■□□ 2.46
LIMS2-202ENST00000355119 CNTLNQ9NXG0 1405 aa30.4■■■□□ 2.46
LIMS2-202ENST00000355119 CDC42BPBQ9Y5S2 1711 aa30.38■■■□□ 2.45
LIMS2-202ENST00000355119 SAMD9LQ8IVG5 1584 aa30.38■■■□□ 2.45
LIMS2-202ENST00000355119 CCDC7Q96M83 1385 aa30.38■■■□□ 2.45
LIMS2-202ENST00000355119 CCDC141Q6ZP82 1450 aa30.37■■■□□ 2.45
LIMS2-202ENST00000355119 RSPH4AQ5TD94 716 aa30.36■■■□□ 2.45
LIMS2-202ENST00000355119 SPATA31E1Q6ZUB1 1445 aa30.36■■■□□ 2.45
LIMS2-202ENST00000355119 NUP155O75694 1391 aa30.35■■■□□ 2.45
LIMS2-202ENST00000355119 KIF15Q9NS87 1388 aa30.35■■■□□ 2.45
LIMS2-202ENST00000355119 HNRNPMP52272 730 aaKnown RBP eCLIP30.34■■■□□ 2.45
LIMS2-202ENST00000355119 POLR1AO95602 1720 aaPredicted RBP30.34■■■□□ 2.45
LIMS2-202ENST00000355119 ABCC2Q92887 1545 aa30.33■■■□□ 2.45
LIMS2-202ENST00000355119 C11orf95C9JLR9 678 aaPredicted RBP30.27■■■□□ 2.44
LIMS2-202ENST00000355119 MAST1Q9Y2H9 1570 aa30.27■■■□□ 2.44
LIMS2-202ENST00000355119 TTC37Q6PGP7 1564 aa30.26■■■□□ 2.43
LIMS2-202ENST00000355119 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.26■■■□□ 2.43
LIMS2-202ENST00000355119 ERCC6L2Q5T890 1561 aa30.25■■■□□ 2.43
LIMS2-202ENST00000355119 ARHGAP5Q13017 1502 aa30.24■■■□□ 2.43
LIMS2-202ENST00000355119 ARHGEF12Q9NZN5 1544 aa30.24■■■□□ 2.43
LIMS2-202ENST00000355119 UHRF1BP1Q6BDS2 1440 aa30.24■■■□□ 2.43
LIMS2-202ENST00000355119 PLEKHH2Q8IVE3 1493 aa30.22■■■□□ 2.43
LIMS2-202ENST00000355119 MYO5CQ9NQX4 1742 aa30.21■■■□□ 2.43
LIMS2-202ENST00000355119 SYCP2Q9BX26 1530 aa30.21■■■□□ 2.43
LIMS2-202ENST00000355119 KIF7Q2M1P5 1343 aa30.2■■■□□ 2.43
LIMS2-202ENST00000355119 CLASP1Q7Z460 1538 aa30.2■■■□□ 2.43
LIMS2-202ENST00000355119 RALGAPBQ86X10 1494 aa30.16■■■□□ 2.42
LIMS2-202ENST00000355119 UHRF1BP1LA0JNW5 1464 aa30.16■■■□□ 2.42
LIMS2-202ENST00000355119 USP47Q96K76 1375 aa30.16■■■□□ 2.42
LIMS2-202ENST00000355119 FAM135AQ9P2D6 1515 aa30.15■■■□□ 2.42
LIMS2-202ENST00000355119 PLXNC1O60486 1568 aa30.14■■■□□ 2.42
LIMS2-202ENST00000355119 KDM5CP41229 1560 aa30.14■■■□□ 2.42
LIMS2-202ENST00000355119 PRKRIP1Q9H875 184 aaPredicted RBP30.13■■■□□ 2.41
LIMS2-202ENST00000355119 UNC13BO14795 1591 aa30.13■■■□□ 2.41
LIMS2-202ENST00000355119 ZNF326Q5BKZ1 582 aaKnown RBP30.11■■■□□ 2.41
LIMS2-202ENST00000355119 ZCCHC11Q5TAX3 1644 aaKnown RBP30.11■■■□□ 2.41
LIMS2-202ENST00000355119 NEFLP07196 543 aa30.1■■■□□ 2.41
LIMS2-202ENST00000355119 ARID4BQ4LE39 1312 aaPredicted RBP30.1■■■□□ 2.41
LIMS2-202ENST00000355119 FKBP8Q14318 412 aa30.08■■■□□ 2.41
LIMS2-202ENST00000355119 HNRNPUQ00839 825 aaKnown RBP eCLIP30.07■■■□□ 2.4
LIMS2-202ENST00000355119 BCORL1Q5H9F3 1711 aa30.06■■■□□ 2.4
LIMS2-202ENST00000355119 PLCH2O75038 1416 aa30.05■■■□□ 2.4
LIMS2-202ENST00000355119 DUOX2Q9NRD8 1548 aa30.03■■■□□ 2.4
LIMS2-202ENST00000355119 IQGAP3Q86VI3 1631 aa30.01■■■□□ 2.39
LIMS2-202ENST00000355119 EFCAB2Q5VUJ9 269 aa29.98■■■□□ 2.39
LIMS2-202ENST00000355119 CARD11Q9BXL7 1154 aa29.98■■■□□ 2.39
LIMS2-202ENST00000355119 CCDC144AA2RUR9 1427 aa29.98■■■□□ 2.39
LIMS2-202ENST00000355119 CCDC184Q52MB2 194 aa29.97■■■□□ 2.39
LIMS2-202ENST00000355119 ERBINQ96RT1 1412 aa29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms