RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 JPH4Q96JJ6 628 aa30.98■■■□□ 2.55
LIMS2-202ENST00000355119 ITSN2Q9NZM3 1697 aa30.98■■■□□ 2.55
LIMS2-202ENST00000355119 KDM5BQ9UGL1 1544 aa30.97■■■□□ 2.55
LIMS2-202ENST00000355119 DDX10Q13206 875 aaKnown RBP30.96■■■□□ 2.55
LIMS2-202ENST00000355119 PRG4Q92954 1404 aaPredicted RBP30.95■■■□□ 2.55
LIMS2-202ENST00000355119 MPHOSPH9Q99550 1183 aa30.91■■■□□ 2.54
LIMS2-202ENST00000355119 CAMSAP2Q08AD1 1489 aa30.88■■■□□ 2.53
LIMS2-202ENST00000355119 ZNF644Q9H582 1327 aaPredicted RBP30.88■■■□□ 2.53
LIMS2-202ENST00000355119 ABCA8O94911 1581 aa30.87■■■□□ 2.53
LIMS2-202ENST00000355119 GPATCH8Q9UKJ3 1502 aaKnown RBP30.86■■■□□ 2.53
LIMS2-202ENST00000355119 KIF14Q15058 1648 aa30.85■■■□□ 2.53
LIMS2-202ENST00000355119 CFDP1Q9UEE9 299 aaPredicted RBP30.84■■■□□ 2.53
LIMS2-202ENST00000355119 ADGBQ8N7X0 1667 aa30.83■■■□□ 2.53
LIMS2-202ENST00000355119 HIRIP3Q9BW71 556 aaPredicted RBP30.83■■■□□ 2.53
LIMS2-202ENST00000355119 CROCC2H7BZ55 1655 aa30.77■■■□□ 2.52
LIMS2-202ENST00000355119 ADGRL2O95490 1459 aa30.77■■■□□ 2.52
LIMS2-202ENST00000355119 ANKRD30BQ9BXX2 1392 aa30.74■■■□□ 2.51
LIMS2-202ENST00000355119 PLEKHD1A6NEE1 506 aa30.74■■■□□ 2.51
LIMS2-202ENST00000355119 CCER2I3L3R5 266 aa30.74■■■□□ 2.51
LIMS2-202ENST00000355119 ATP10BO94823 1461 aa30.73■■■□□ 2.51
LIMS2-202ENST00000355119 ANP32CO43423 234 aa30.73■■■□□ 2.51
LIMS2-202ENST00000355119 NCOA1Q15788 1441 aa30.72■■■□□ 2.51
LIMS2-202ENST00000355119 KCNH8Q96L42 1107 aa30.72■■■□□ 2.51
LIMS2-202ENST00000355119 RPRD2Q5VT52 1461 aaKnown RBP30.71■■■□□ 2.51
LIMS2-202ENST00000355119 ABCC10Q5T3U5 1492 aa30.7■■■□□ 2.51
LIMS2-202ENST00000355119 CDC42BPAQ5VT25 1732 aa30.68■■■□□ 2.5
LIMS2-202ENST00000355119 SLC4A1APQ9BWU0 796 aaKnown RBP30.67■■■□□ 2.5
LIMS2-202ENST00000355119 FOXD1Q16676 465 aa30.66■■■□□ 2.5
LIMS2-202ENST00000355119 L3MBTL2Q969R5 705 aa30.66■■■□□ 2.5
LIMS2-202ENST00000355119 ANKRD30AQ9BXX3 1397 aa30.66■■■□□ 2.5
LIMS2-202ENST00000355119 ZNF777Q9ULD5 760 aaPredicted RBP30.66■■■□□ 2.5
LIMS2-202ENST00000355119 PZPP20742 1482 aa30.65■■■□□ 2.5
LIMS2-202ENST00000355119 SHANK2Q9UPX8 1470 aa30.63■■■□□ 2.49
LIMS2-202ENST00000355119 PTPRGP23470 1445 aa30.62■■■□□ 2.49
LIMS2-202ENST00000355119 HSPA5P11021 654 aaKnown RBP30.62■■■□□ 2.49
LIMS2-202ENST00000355119 TEX14Q8IWB6 1497 aa30.61■■■□□ 2.49
LIMS2-202ENST00000355119 EIF4G2P78344 907 aaKnown RBP eCLIP30.61■■■□□ 2.49
LIMS2-202ENST00000355119 CHD1O14646 1710 aa30.58■■■□□ 2.49
LIMS2-202ENST00000355119 KIAA1107Q9UPP5 1409 aa30.53■■■□□ 2.48
LIMS2-202ENST00000355119 SHROOM2Q13796 1616 aa30.53■■■□□ 2.48
LIMS2-202ENST00000355119 C9orf84Q5VXU9 1444 aa30.52■■■□□ 2.48
LIMS2-202ENST00000355119 ANKRD50Q9ULJ7 1429 aa30.52■■■□□ 2.48
LIMS2-202ENST00000355119 ARHGEF5Q12774 1597 aa30.52■■■□□ 2.48
LIMS2-202ENST00000355119 WASHC2AQ641Q2 1341 aa30.5■■■□□ 2.47
LIMS2-202ENST00000355119 SUPT16HQ9Y5B9 1047 aaKnown RBP30.47■■■□□ 2.47
LIMS2-202ENST00000355119 NBPF8Q3BBV2 869 aa30.46■■■□□ 2.47
LIMS2-202ENST00000355119 TSPY4P0CV99 314 aa30.44■■■□□ 2.46
LIMS2-202ENST00000355119 TSPY10P0CW01 314 aa30.44■■■□□ 2.46
LIMS2-202ENST00000355119 PREX2Q70Z35 1606 aa30.44■■■□□ 2.46
LIMS2-202ENST00000355119 KDM5DQ9BY66 1539 aa30.43■■■□□ 2.46
LIMS2-202ENST00000355119 MBD5Q9P267 1494 aa30.41■■■□□ 2.46
LIMS2-202ENST00000355119 PKD2Q13563 968 aa30.4■■■□□ 2.46
LIMS2-202ENST00000355119 CNTLNQ9NXG0 1405 aa30.4■■■□□ 2.46
LIMS2-202ENST00000355119 CDC42BPBQ9Y5S2 1711 aa30.38■■■□□ 2.45
LIMS2-202ENST00000355119 SAMD9LQ8IVG5 1584 aa30.38■■■□□ 2.45
LIMS2-202ENST00000355119 CCDC7Q96M83 1385 aa30.38■■■□□ 2.45
LIMS2-202ENST00000355119 CCDC141Q6ZP82 1450 aa30.37■■■□□ 2.45
LIMS2-202ENST00000355119 RSPH4AQ5TD94 716 aa30.36■■■□□ 2.45
LIMS2-202ENST00000355119 SPATA31E1Q6ZUB1 1445 aa30.36■■■□□ 2.45
LIMS2-202ENST00000355119 NUP155O75694 1391 aa30.35■■■□□ 2.45
LIMS2-202ENST00000355119 KIF15Q9NS87 1388 aa30.35■■■□□ 2.45
LIMS2-202ENST00000355119 HNRNPMP52272 730 aaKnown RBP eCLIP30.34■■■□□ 2.45
LIMS2-202ENST00000355119 POLR1AO95602 1720 aaPredicted RBP30.34■■■□□ 2.45
LIMS2-202ENST00000355119 ABCC2Q92887 1545 aa30.33■■■□□ 2.45
LIMS2-202ENST00000355119 C11orf95C9JLR9 678 aaPredicted RBP30.27■■■□□ 2.44
LIMS2-202ENST00000355119 MAST1Q9Y2H9 1570 aa30.27■■■□□ 2.44
LIMS2-202ENST00000355119 TTC37Q6PGP7 1564 aa30.26■■■□□ 2.43
LIMS2-202ENST00000355119 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.26■■■□□ 2.43
LIMS2-202ENST00000355119 ERCC6L2Q5T890 1561 aa30.25■■■□□ 2.43
LIMS2-202ENST00000355119 ARHGAP5Q13017 1502 aa30.24■■■□□ 2.43
LIMS2-202ENST00000355119 ARHGEF12Q9NZN5 1544 aa30.24■■■□□ 2.43
LIMS2-202ENST00000355119 UHRF1BP1Q6BDS2 1440 aa30.24■■■□□ 2.43
LIMS2-202ENST00000355119 PLEKHH2Q8IVE3 1493 aa30.22■■■□□ 2.43
LIMS2-202ENST00000355119 MYO5CQ9NQX4 1742 aa30.21■■■□□ 2.43
LIMS2-202ENST00000355119 SYCP2Q9BX26 1530 aa30.21■■■□□ 2.43
LIMS2-202ENST00000355119 KIF7Q2M1P5 1343 aa30.2■■■□□ 2.43
LIMS2-202ENST00000355119 CLASP1Q7Z460 1538 aa30.2■■■□□ 2.43
LIMS2-202ENST00000355119 RALGAPBQ86X10 1494 aa30.16■■■□□ 2.42
LIMS2-202ENST00000355119 UHRF1BP1LA0JNW5 1464 aa30.16■■■□□ 2.42
LIMS2-202ENST00000355119 USP47Q96K76 1375 aa30.16■■■□□ 2.42
LIMS2-202ENST00000355119 FAM135AQ9P2D6 1515 aa30.15■■■□□ 2.42
LIMS2-202ENST00000355119 PLXNC1O60486 1568 aa30.14■■■□□ 2.42
LIMS2-202ENST00000355119 KDM5CP41229 1560 aa30.14■■■□□ 2.42
LIMS2-202ENST00000355119 PRKRIP1Q9H875 184 aaPredicted RBP30.13■■■□□ 2.41
LIMS2-202ENST00000355119 UNC13BO14795 1591 aa30.13■■■□□ 2.41
LIMS2-202ENST00000355119 ZNF326Q5BKZ1 582 aaKnown RBP30.11■■■□□ 2.41
LIMS2-202ENST00000355119 ZCCHC11Q5TAX3 1644 aaKnown RBP30.11■■■□□ 2.41
LIMS2-202ENST00000355119 NEFLP07196 543 aa30.1■■■□□ 2.41
LIMS2-202ENST00000355119 ARID4BQ4LE39 1312 aaPredicted RBP30.1■■■□□ 2.41
LIMS2-202ENST00000355119 FKBP8Q14318 412 aa30.08■■■□□ 2.41
LIMS2-202ENST00000355119 HNRNPUQ00839 825 aaKnown RBP eCLIP30.07■■■□□ 2.4
LIMS2-202ENST00000355119 BCORL1Q5H9F3 1711 aa30.06■■■□□ 2.4
LIMS2-202ENST00000355119 PLCH2O75038 1416 aa30.05■■■□□ 2.4
LIMS2-202ENST00000355119 DUOX2Q9NRD8 1548 aa30.03■■■□□ 2.4
LIMS2-202ENST00000355119 IQGAP3Q86VI3 1631 aa30.01■■■□□ 2.39
LIMS2-202ENST00000355119 EFCAB2Q5VUJ9 269 aa29.98■■■□□ 2.39
LIMS2-202ENST00000355119 CARD11Q9BXL7 1154 aa29.98■■■□□ 2.39
LIMS2-202ENST00000355119 CCDC144AA2RUR9 1427 aa29.98■■■□□ 2.39
LIMS2-202ENST00000355119 CCDC184Q52MB2 194 aa29.97■■■□□ 2.39
LIMS2-202ENST00000355119 ERBINQ96RT1 1412 aa29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms